RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 MYH1P12882 1939 aa10.85□□□□□ -0.67
LDHA-220ENST00000542179 COL2A1P02458 1487 aaPredicted RBP10.85□□□□□ -0.67
LDHA-220ENST00000542179 DICER1Q9UPY3 1922 aaKnown RBP10.84□□□□□ -0.67
LDHA-220ENST00000542179 ERICH2A1L162 156 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 IFIT3O14879 490 aaKnown RBP10.84□□□□□ -0.67
LDHA-220ENST00000542179 PDIA4P13667 645 aaKnown RBP10.84□□□□□ -0.67
LDHA-220ENST00000542179 NUCB2P80303 420 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 GABPAQ06546 454 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 NFIAQ12857 509 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 DLGAP5Q15398 846 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 SEC23AQ15436 765 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 CCDC178Q5BJE1 867 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 TMEM67Q5HYA8 995 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 RRP12Q5JTH9 1297 aaKnown RBP10.84□□□□□ -0.67
LDHA-220ENST00000542179 FKBP1CQ5VVH2 108 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 IQCA1Q86XH1 822 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 CCDC83Q8IWF9 413 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 NECAB1Q8N987 351 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 ANKS1AQ92625 1134 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 ZSCAN10Q96SZ4 725 aaPredicted RBP10.84□□□□□ -0.67
LDHA-220ENST00000542179 UBAC1Q9BSL1 405 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 EHD4Q9H223 541 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 LY9Q9HBG7 655 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 TOMM22Q9NS69 142 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 TCP11L1Q9NUJ3 509 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 SWAP70Q9UH65 585 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 SAP30BPQ9UHR5 308 aaKnown RBP10.84□□□□□ -0.67
LDHA-220ENST00000542179 BRPF3Q9ULD4 1205 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 PCDHAC2Q9Y5I4 1007 aa10.84□□□□□ -0.67
LDHA-220ENST00000542179 NID2Q14112 1375 aa10.83□□□□□ -0.68
LDHA-220ENST00000542179 ATRNL1Q5VV63 1379 aa10.83□□□□□ -0.68
LDHA-220ENST00000542179 KLF18A0A0U1RQI7 1052 aa10.83□□□□□ -0.68
LDHA-220ENST00000542179 DHX16O60231 1041 aaKnown RBP10.83□□□□□ -0.68
LDHA-220ENST00000542179 RANBP6O60518 1105 aaKnown RBP10.83□□□□□ -0.68
LDHA-220ENST00000542179 PRDM1O75626 825 aa10.83□□□□□ -0.68
LDHA-220ENST00000542179 CDK8P49336 464 aa10.83□□□□□ -0.68
LDHA-220ENST00000542179 SCRN1Q12765 414 aa10.83□□□□□ -0.68
LDHA-220ENST00000542179 PICALMQ13492 652 aa10.83□□□□□ -0.68
LDHA-220ENST00000542179 WTAPQ15007 396 aa10.83□□□□□ -0.68
LDHA-220ENST00000542179 DMRTA1Q5VZB9 504 aa10.83□□□□□ -0.68
LDHA-220ENST00000542179 FOXP4Q8IVH2 680 aaPredicted RBP10.83□□□□□ -0.68
LDHA-220ENST00000542179 ZNF444Q8N0Y2 327 aaPredicted RBP10.83□□□□□ -0.68
LDHA-220ENST00000542179 STK11IPQ8N1F8 1099 aa10.83□□□□□ -0.68
LDHA-220ENST00000542179 SMARCC2Q8TAQ2 1214 aa10.83□□□□□ -0.68
LDHA-220ENST00000542179 DYNLL2Q96FJ2 89 aa10.83□□□□□ -0.68
LDHA-220ENST00000542179 TDRD3Q9H7E2 651 aaKnown RBP10.83□□□□□ -0.68
LDHA-220ENST00000542179 MKNK2Q9HBH9 465 aa10.83□□□□□ -0.68
LDHA-220ENST00000542179 FAM198AQ9UFP1 575 aa10.83□□□□□ -0.68
LDHA-220ENST00000542179 HPS5Q9UPZ3 1129 aa10.83□□□□□ -0.68
LDHA-220ENST00000542179 SMC3Q9UQE7 1217 aa10.83□□□□□ -0.68
LDHA-220ENST00000542179 HLA-DOAP06340 250 aa10.82□□□□□ -0.68
LDHA-220ENST00000542179 RASA1P20936 1047 aa10.82□□□□□ -0.68
LDHA-220ENST00000542179 TFAP4Q01664 338 aa10.82□□□□□ -0.68
LDHA-220ENST00000542179 RAB3GAP1Q15042 981 aa10.82□□□□□ -0.68
LDHA-220ENST00000542179 PPP2R5BQ15173 497 aa10.82□□□□□ -0.68
LDHA-220ENST00000542179 METTL16Q86W50 562 aaKnown RBP10.82□□□□□ -0.68
LDHA-220ENST00000542179 DGKHQ86XP1 1220 aa10.82□□□□□ -0.68
LDHA-220ENST00000542179 MYOZ2Q9NPC6 264 aa10.82□□□□□ -0.68
LDHA-220ENST00000542179 TMOD2Q9NZR1 351 aa10.82□□□□□ -0.68
LDHA-220ENST00000542179 PI4KBQ9UBF8 816 aa10.82□□□□□ -0.68
LDHA-220ENST00000542179 ZNF70Q9UC06 446 aaPredicted RBP10.82□□□□□ -0.68
LDHA-220ENST00000542179 SERPINB13Q9UIV8 391 aa10.82□□□□□ -0.68
LDHA-220ENST00000542179 SLC12A7Q9Y666 1083 aa10.82□□□□□ -0.68
LDHA-220ENST00000542179 SBF1O95248 1867 aa10.82□□□□□ -0.68
LDHA-220ENST00000542179 TNKSO95271 1327 aa10.82□□□□□ -0.68
LDHA-220ENST00000542179 CCDC69A6NI79 296 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 TSPY2A6NKD2 308 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 MYO1BO43795 1136 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 YBX3P16989 372 aaKnown RBP eCLIP10.81□□□□□ -0.681e-29■■□□□ 11.8
LDHA-220ENST00000542179 PTPREP23469 700 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 NOVP48745 357 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 GMPSP49915 693 aaPredicted RBP10.81□□□□□ -0.68
LDHA-220ENST00000542179 STK3Q13188 491 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 CAMK2BQ13554 666 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 APOA5Q6Q788 366 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 SYNE3Q6ZMZ3 975 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 FAM83AQ86UY5 434 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 ZFPM1Q8IX07 1006 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 GPC2Q8N158 579 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 ENAHQ8N8S7 591 aaPredicted RBP10.81□□□□□ -0.68
LDHA-220ENST00000542179 NEDD1Q8NHV4 660 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 FAM151AQ8WW52 585 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 ZDHHC16Q969W1 377 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 ZKSCAN3Q9BRR0 538 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 SENP2Q9HC62 589 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 ZNF541Q9H0D2 1346 aa10.81□□□□□ -0.68
LDHA-220ENST00000542179 PLIN4Q96Q06 1357 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 DDTLA6NHG4 134 aaPredicted RBP10.8□□□□□ -0.68
LDHA-220ENST00000542179 GOLGA8BA8MQT2 603 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 WNT10BO00744 389 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 ZBTB43O43298 467 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 CTDNEP1O95476 244 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 TSPY3P0CV98 308 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 TSPY8P0CW00 308 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 PDCP20941 246 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 GJB2P29033 226 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 CACNB3P54284 484 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 HMGN5P82970 282 aaKnown RBP10.8□□□□□ -0.68
LDHA-220ENST00000542179 SLC4A8Q2Y0W8 1093 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 FAM47AQ5JRC9 791 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms