RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 PDE3AQ14432 1141 aa9.58□□□□□ -0.88
NPIPB4-215ENST00000542133 TWISTNBQ3B726 338 aaPredicted RBP9.58□□□□□ -0.88
NPIPB4-215ENST00000542133 BEND3Q5T5X7 828 aa9.58□□□□□ -0.88
NPIPB4-215ENST00000542133 WDR66Q8TBY9 1149 aa9.58□□□□□ -0.88
NPIPB4-215ENST00000542133 APBA2Q99767 749 aa9.58□□□□□ -0.88
NPIPB4-215ENST00000542133 C1QTNF1Q9BXJ1 281 aa9.58□□□□□ -0.88
NPIPB4-215ENST00000542133 IDI2Q9BXS1 227 aa9.58□□□□□ -0.88
NPIPB4-215ENST00000542133 PDLIM7Q9NR12 457 aa9.58□□□□□ -0.88
NPIPB4-215ENST00000542133 MYBBP1AQ9BQG0 1328 aaKnown RBP9.57□□□□□ -0.88
NPIPB4-215ENST00000542133 DDTLA6NHG4 134 aaPredicted RBP9.57□□□□□ -0.88
NPIPB4-215ENST00000542133 APAF1O14727 1248 aa9.57□□□□□ -0.88
NPIPB4-215ENST00000542133 PDE8BO95263 885 aa9.57□□□□□ -0.88
NPIPB4-215ENST00000542133 DNAJB2P25686 324 aa9.57□□□□□ -0.88
NPIPB4-215ENST00000542133 SPP2Q13103 211 aa9.57□□□□□ -0.88
NPIPB4-215ENST00000542133 LRRC24Q50LG9 513 aa9.57□□□□□ -0.88
NPIPB4-215ENST00000542133 METTL24Q5JXM2 366 aa9.57□□□□□ -0.88
NPIPB4-215ENST00000542133 MORN1Q5T089 497 aa9.57□□□□□ -0.88
NPIPB4-215ENST00000542133 ZSCAN29Q8IWY8 852 aaPredicted RBP9.57□□□□□ -0.88
NPIPB4-215ENST00000542133 ZNF280CQ8ND82 737 aa9.57□□□□□ -0.88
NPIPB4-215ENST00000542133 RNPC3Q96LT9 517 aaKnown RBP9.57□□□□□ -0.88
NPIPB4-215ENST00000542133 TXNRD2Q9NNW7 524 aa9.57□□□□□ -0.88
NPIPB4-215ENST00000542133 DDX20Q9UHI6 824 aaKnown RBP9.57□□□□□ -0.88
NPIPB4-215ENST00000542133 HCN4Q9Y3Q4 1203 aa9.57□□□□□ -0.88
NPIPB4-215ENST00000542133 CHD9Q3L8U1 2897 aa9.57□□□□□ -0.88
NPIPB4-215ENST00000542133 MUC6Q6W4X9 2439 aa9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 F6X3S4 739 aa9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 MAPK4P31152 587 aa9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 IRX3P78415 501 aaPredicted RBP9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 MRPS5P82675 430 aaKnown RBP9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 SNX17Q15036 470 aa9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 TRIM60Q495X7 471 aa9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 SH3D19Q5HYK7 790 aa9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 POTEEQ6S8J3 1075 aa9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 GPR142Q7Z601 462 aa9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 FTSJ3Q8IY81 847 aaKnown RBP9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 GPRC5AQ8NFJ5 357 aa9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 PPM1EQ8WY54 764 aa9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 LPAR1Q92633 364 aa9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 SECISBP2LQ93073 1101 aaKnown RBP9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 KAZALD1Q96I82 304 aa9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 YTHDC1Q96MU7 727 aaKnown RBP9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 PORCNQ9H237 461 aa9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 XIRP2A4UGR9 3374 aa9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 MYH2Q9UKX2 1941 aa9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 GAKO14976 1311 aa9.56□□□□□ -0.88
NPIPB4-215ENST00000542133 TRIM43BA6NCK2 446 aa9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 FAM196BA6NMK8 535 aa9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 MSCO60682 206 aa9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 FGFR2P21802 821 aa9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 EPHB4P54760 987 aa9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 HERVK_113P62684 666 aa9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 PUM3Q15397 648 aaKnown RBP9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 AKNAD1Q5T1N1 836 aa9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 SLC39A5Q6ZMH5 540 aa9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 SH3RF1Q7Z6J0 888 aa9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 TRIM43Q96BQ3 446 aaPredicted RBP9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 SUCLG2Q96I99 432 aa9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 NECAB3Q96P71 396 aaPredicted RBP9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 TBC1D2Q9BYX2 928 aa9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 GZF1Q9H116 711 aaPredicted RBP9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 ZNF576Q9H609 170 aa9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 DDX4Q9NQI0 724 aaKnown RBP9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 FLRT1Q9NZU1 646 aa9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 UTYO14607 1347 aa9.55□□□□□ -0.88
NPIPB4-215ENST00000542133 TBC1D12O60347 775 aa9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 KDM4AO75164 1064 aa9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 LDHBP07195 334 aaKnown RBP9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 IFIT1P09914 478 aaKnown RBP9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 ITGB8P26012 769 aa9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 EMP3P54852 163 aa9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 ERVK-9P63128 1117 aa9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 ERVK-24P63145 666 aa9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 MAP2K5Q13163 448 aa9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 PICALMQ13492 652 aa9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 GJC2Q5T442 439 aaPredicted RBP9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 MFSD14CQ5VZR4 134 aa9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 PLEKHH3Q7Z736 793 aa9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 IL27Q8NEV9 243 aa9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 TIFAQ96CG3 184 aa9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 SNX27Q96L92 541 aa9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 GAS2L1Q99501 681 aaPredicted RBP9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 P2RX7Q99572 595 aaKnown RBP9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 LRFN3Q9BTN0 628 aa9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 OSBPL5Q9H0X9 879 aaPredicted RBP9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 C9orf78Q9NZ63 289 aaPredicted RBP9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 RBPJLQ9UBG7 517 aa9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 SALL1Q9NSC2 1324 aa9.54□□□□□ -0.88
NPIPB4-215ENST00000542133 HOXA7P31268 230 aaPredicted RBP9.53□□□□□ -0.88
NPIPB4-215ENST00000542133 MTMR2Q13614 643 aa9.53□□□□□ -0.88
NPIPB4-215ENST00000542133 RRP1BQ14684 758 aaKnown RBP9.53□□□□□ -0.88
NPIPB4-215ENST00000542133 Q3C1V9 767 aa9.53□□□□□ -0.88
NPIPB4-215ENST00000542133 RABL6Q3YEC7 729 aaPredicted RBP9.53□□□□□ -0.88
NPIPB4-215ENST00000542133 WWC1Q8IX03 1113 aa9.53□□□□□ -0.88
NPIPB4-215ENST00000542133 TRPV1Q8NER1 839 aa9.53□□□□□ -0.88
NPIPB4-215ENST00000542133 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.53□□□□□ -0.88
NPIPB4-215ENST00000542133 SIPA1L1O43166 1804 aa9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 USP17L5A8MUK1 530 aa9.52□□□□□ -0.89
NPIPB4-215ENST00000542133 KBTBD13C9JR72 458 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms