RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 FXR2P51116 673 aaKnown RBP eCLIP9.29□□□□□ -0.92
NECAP1-205ENST00000541948 SEPT2Q15019 361 aa9.29□□□□□ -0.92
NECAP1-205ENST00000541948 Q3C1V9 767 aa9.29□□□□□ -0.92
NECAP1-205ENST00000541948 C12orf60Q5U649 245 aa9.29□□□□□ -0.92
NECAP1-205ENST00000541948 CTR9Q6PD62 1173 aa9.29□□□□□ -0.92
NECAP1-205ENST00000541948 TMED8Q6PL24 325 aaPredicted RBP9.29□□□□□ -0.92
NECAP1-205ENST00000541948 KBTBD3Q8NAB2 608 aa9.29□□□□□ -0.92
NECAP1-205ENST00000541948 EXOC6Q8TAG9 804 aa9.29□□□□□ -0.92
NECAP1-205ENST00000541948 SHISA4Q96DD7 197 aa9.29□□□□□ -0.92
NECAP1-205ENST00000541948 STRBPQ96SI9 672 aaKnown RBP9.29□□□□□ -0.92
NECAP1-205ENST00000541948 P2RX7Q99572 595 aaKnown RBP9.29□□□□□ -0.92
NECAP1-205ENST00000541948 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.29□□□□□ -0.92
NECAP1-205ENST00000541948 CRNKL1Q9BZJ0 848 aaKnown RBP9.29□□□□□ -0.92
NECAP1-205ENST00000541948 EPB41L4AQ9HCS5 686 aaPredicted RBP9.29□□□□□ -0.92
NECAP1-205ENST00000541948 RBPJLQ9UBG7 517 aa9.29□□□□□ -0.92
NECAP1-205ENST00000541948 MYPNQ86TC9 1320 aa9.29□□□□□ -0.92
NECAP1-205ENST00000541948 USP17L10C9JJH3 530 aa9.28□□□□□ -0.92
NECAP1-205ENST00000541948 USP17L12C9JPN9 530 aa9.28□□□□□ -0.92
NECAP1-205ENST00000541948 USP17L21D6R901 530 aa9.28□□□□□ -0.92
NECAP1-205ENST00000541948 PITPNM1O00562 1244 aa9.28□□□□□ -0.92
NECAP1-205ENST00000541948 ELNP15502 786 aa9.28□□□□□ -0.92
NECAP1-205ENST00000541948 HOXA7P31268 230 aaPredicted RBP9.28□□□□□ -0.92
NECAP1-205ENST00000541948 ZYXQ15942 572 aaKnown RBP9.28□□□□□ -0.92
NECAP1-205ENST00000541948 ABCB5Q2M3G0 1257 aa9.28□□□□□ -0.92
NECAP1-205ENST00000541948 CERKLQ49MI3 558 aaPredicted RBP9.28□□□□□ -0.92
NECAP1-205ENST00000541948 SLC9C1Q4G0N8 1177 aa9.28□□□□□ -0.92
NECAP1-205ENST00000541948 TTC6Q86TZ1 520 aa9.28□□□□□ -0.92
NECAP1-205ENST00000541948 C12orf42Q96LP6 360 aa9.28□□□□□ -0.92
NECAP1-205ENST00000541948 AS3MTQ9HBK9 375 aa9.28□□□□□ -0.92
NECAP1-205ENST00000541948 MORF4L1Q9UBU8 362 aa9.28□□□□□ -0.92
NECAP1-205ENST00000541948 GJD2Q9UKL4 321 aa9.28□□□□□ -0.92
NECAP1-205ENST00000541948 TACC3Q9Y6A5 838 aa9.28□□□□□ -0.92
NECAP1-205ENST00000541948 FMNL1O95466 1100 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-205ENST00000541948 POLR3DP05423 398 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-205ENST00000541948 CDK8P49336 464 aa9.27□□□□□ -0.93
NECAP1-205ENST00000541948 FLT3LGP49771 235 aa9.27□□□□□ -0.93
NECAP1-205ENST00000541948 FCGRTP55899 365 aa9.27□□□□□ -0.93
NECAP1-205ENST00000541948 TRIM32Q13049 653 aa9.27□□□□□ -0.93
NECAP1-205ENST00000541948 HDAC1Q13547 482 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-205ENST00000541948 RAB3GAP1Q15042 981 aa9.27□□□□□ -0.93
NECAP1-205ENST00000541948 FAM110CQ1W6H9 321 aa9.27□□□□□ -0.93
NECAP1-205ENST00000541948 CERS3Q8IU89 383 aa9.27□□□□□ -0.93
NECAP1-205ENST00000541948 HOMEZQ8IX15 550 aa9.27□□□□□ -0.93
NECAP1-205ENST00000541948 SMCR8Q8TEV9 937 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-205ENST00000541948 PORCNQ9H237 461 aa9.27□□□□□ -0.93
NECAP1-205ENST00000541948 SLC4A4Q9Y6R1 1079 aa9.27□□□□□ -0.93
NECAP1-205ENST00000541948 TTC41PQ6P2S7 1318 aa9.27□□□□□ -0.93
NECAP1-205ENST00000541948 COL11A1P12107 1806 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-205ENST00000541948 C19orf81C9J6K1 198 aa9.26□□□□□ -0.93
NECAP1-205ENST00000541948 RNF113AO15541 343 aaKnown RBP9.26□□□□□ -0.93
NECAP1-205ENST00000541948 ATXN8OSP0DMR3 200 aa9.26□□□□□ -0.93
NECAP1-205ENST00000541948 VCAM1P19320 739 aa9.26□□□□□ -0.93
NECAP1-205ENST00000541948 MX1P20591 662 aa9.26□□□□□ -0.93
NECAP1-205ENST00000541948 HERVK_113P62684 666 aa9.26□□□□□ -0.93
NECAP1-205ENST00000541948 USP17L2Q6R6M4 530 aa9.26□□□□□ -0.93
NECAP1-205ENST00000541948 C16orf86Q6ZW13 317 aa9.26□□□□□ -0.93
NECAP1-205ENST00000541948 SMC5Q8IY18 1101 aa9.26□□□□□ -0.93
NECAP1-205ENST00000541948 APPBP2Q92624 585 aa9.26□□□□□ -0.93
NECAP1-205ENST00000541948 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.26□□□□□ -0.93
NECAP1-205ENST00000541948 KIAA1683Q9H0B3 1180 aa9.26□□□□□ -0.93
NECAP1-205ENST00000541948 ATP8A2Q9NTI2 1148 aa9.26□□□□□ -0.93
NECAP1-205ENST00000541948 GINM1Q9NU53 330 aa9.26□□□□□ -0.93
NECAP1-205ENST00000541948 BTBD7Q9P203 1132 aa9.26□□□□□ -0.93
NECAP1-205ENST00000541948 TNPO2O14787 897 aaKnown RBP9.25□□□□□ -0.93
NECAP1-205ENST00000541948 GPAA1O43292 621 aa9.25□□□□□ -0.93
NECAP1-205ENST00000541948 RASA1P20936 1047 aa9.25□□□□□ -0.93
NECAP1-205ENST00000541948 GRK4P32298 578 aa9.25□□□□□ -0.93
NECAP1-205ENST00000541948 ZMYM1Q5SVZ6 1142 aa9.25□□□□□ -0.93
NECAP1-205ENST00000541948 ANKRD45Q5TZF3 282 aa9.25□□□□□ -0.93
NECAP1-205ENST00000541948 CATSPERGQ6ZRH7 1159 aa9.25□□□□□ -0.93
NECAP1-205ENST00000541948 CCDC129Q6ZRS4 1044 aa9.25□□□□□ -0.93
NECAP1-205ENST00000541948 UBE2Q1Q7Z7E8 422 aa9.25□□□□□ -0.93
NECAP1-205ENST00000541948 STK11IPQ8N1F8 1099 aa9.25□□□□□ -0.93
NECAP1-205ENST00000541948 USP6NLQ92738 828 aa9.25□□□□□ -0.93
NECAP1-205ENST00000541948 TRIM34Q9BYJ4 488 aa9.25□□□□□ -0.93
NECAP1-205ENST00000541948 UNC93B1Q9H1C4 597 aa9.25□□□□□ -0.93
NECAP1-205ENST00000541948 STAP2Q9UGK3 403 aa9.25□□□□□ -0.93
NECAP1-205ENST00000541948 ALPK3Q96L96 1907 aa9.25□□□□□ -0.93
NECAP1-205ENST00000541948 ROBO3Q96MS0 1386 aa9.24□□□□□ -0.93
NECAP1-205ENST00000541948 SPDYE16A6NNV3 312 aaPredicted RBP9.24□□□□□ -0.93
NECAP1-205ENST00000541948 ADCY3O60266 1144 aa9.24□□□□□ -0.93
NECAP1-205ENST00000541948 INHAP05111 366 aa9.24□□□□□ -0.93
NECAP1-205ENST00000541948 CCL5P13501 91 aa9.24□□□□□ -0.93
NECAP1-205ENST00000541948 GCLCP48506 637 aaPredicted RBP9.24□□□□□ -0.93
NECAP1-205ENST00000541948 PDE1AP54750 535 aa9.24□□□□□ -0.93
NECAP1-205ENST00000541948 UBXN2AP68543 259 aa9.24□□□□□ -0.93
NECAP1-205ENST00000541948 IRX6P78412 446 aaPredicted RBP9.24□□□□□ -0.93
NECAP1-205ENST00000541948 PABPC4Q13310 644 aaKnown RBP eCLIP9.24□□□□□ -0.93
NECAP1-205ENST00000541948 IRF5Q13568 498 aa9.24□□□□□ -0.93
NECAP1-205ENST00000541948 SBK1Q52WX2 424 aa9.24□□□□□ -0.93
NECAP1-205ENST00000541948 VPS53Q5VIR6 699 aa9.24□□□□□ -0.93
NECAP1-205ENST00000541948 B4GALNT3Q6L9W6 998 aa9.24□□□□□ -0.93
NECAP1-205ENST00000541948 TRIB2Q92519 343 aa9.24□□□□□ -0.93
NECAP1-205ENST00000541948 LNPKQ9C0E8 428 aa9.24□□□□□ -0.93
NECAP1-205ENST00000541948 RPAP3Q9H6T3 665 aaPredicted RBP9.24□□□□□ -0.93
NECAP1-205ENST00000541948 INCENPQ9NQS7 918 aa9.24□□□□□ -0.93
NECAP1-205ENST00000541948 PLSCR2Q9NRY7 297 aa9.24□□□□□ -0.93
NECAP1-205ENST00000541948 TMOD4Q9NZQ9 345 aa9.24□□□□□ -0.93
NECAP1-205ENST00000541948 PNMA3Q9UL41 463 aa9.24□□□□□ -0.93
NECAP1-205ENST00000541948 SUPT16HQ9Y5B9 1047 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms