RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 USP17L2Q6R6M4 530 aa16.96■□□□□ 0.31
SUDS3-203ENST00000541591 STK11IPQ8N1F8 1099 aa16.96■□□□□ 0.31
SUDS3-203ENST00000541591 CHMP4BQ9H444 224 aaKnown RBP16.96■□□□□ 0.31
SUDS3-203ENST00000541591 C19orf81C9J6K1 198 aa16.95■□□□□ 0.3
SUDS3-203ENST00000541591 CYP2B6P20813 491 aa16.95■□□□□ 0.3
SUDS3-203ENST00000541591 Q3C1V9 767 aa16.95■□□□□ 0.3
SUDS3-203ENST00000541591 CERS3Q8IU89 383 aa16.95■□□□□ 0.3
SUDS3-203ENST00000541591 DEFB118Q96PH6 123 aa16.95■□□□□ 0.3
SUDS3-203ENST00000541591 PORCNQ9H237 461 aa16.95■□□□□ 0.3
SUDS3-203ENST00000541591 RBPJLQ9UBG7 517 aa16.95■□□□□ 0.3
SUDS3-203ENST00000541591 IGSF3O75054 1194 aa16.94■□□□□ 0.3
SUDS3-203ENST00000541591 GJB1P08034 283 aa16.94■□□□□ 0.3
SUDS3-203ENST00000541591 AKR1B1P15121 316 aa16.94■□□□□ 0.3
SUDS3-203ENST00000541591 HOXA7P31268 230 aaPredicted RBP16.94■□□□□ 0.3
SUDS3-203ENST00000541591 GABPAQ06546 454 aa16.94■□□□□ 0.3
SUDS3-203ENST00000541591 U2AF1L4Q8WU68 220 aaKnown RBP16.94■□□□□ 0.3
SUDS3-203ENST00000541591 PUS7LQ9H0K6 701 aaKnown RBP16.94■□□□□ 0.3
SUDS3-203ENST00000541591 CABP5Q9NP86 173 aa16.94■□□□□ 0.3
SUDS3-203ENST00000541591 MORF4L1Q9UBU8 362 aa16.94■□□□□ 0.3
SUDS3-203ENST00000541591 PCDHB15Q9Y5E8 787 aa16.94■□□□□ 0.3
SUDS3-203ENST00000541591 A0A1W2PRG0 241 aa16.93■□□□□ 0.3
SUDS3-203ENST00000541591 CNMDO75829 334 aa16.93■□□□□ 0.3
SUDS3-203ENST00000541591 VCAM1P19320 739 aa16.93■□□□□ 0.3
SUDS3-203ENST00000541591 GJA8P48165 433 aa16.93■□□□□ 0.3
SUDS3-203ENST00000541591 ERVK-9P63128 1117 aa16.93■□□□□ 0.3
SUDS3-203ENST00000541591 ERVK-24P63145 666 aa16.93■□□□□ 0.3
SUDS3-203ENST00000541591 IRF5Q13568 498 aa16.93■□□□□ 0.3
SUDS3-203ENST00000541591 SAMD1Q6SPF0 538 aaPredicted RBP16.93■□□□□ 0.3
SUDS3-203ENST00000541591 OTUD7AQ8TE49 926 aaPredicted RBP16.93■□□□□ 0.3
SUDS3-203ENST00000541591 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.93■□□□□ 0.33e-6■□□□□ 9.6
SUDS3-203ENST00000541591 RPAP3Q9H6T3 665 aaPredicted RBP16.93■□□□□ 0.3
SUDS3-203ENST00000541591 GINM1Q9NU53 330 aa16.93■□□□□ 0.3
SUDS3-203ENST00000541591 GJD2Q9UKL4 321 aa16.93■□□□□ 0.3
SUDS3-203ENST00000541591 SLC4A4Q9Y6R1 1079 aa16.93■□□□□ 0.3
SUDS3-203ENST00000541591 MCM3APO60318 1980 aa16.92■□□□□ 0.3
SUDS3-203ENST00000541591 H0YGN5 161 aa16.92■□□□□ 0.3
SUDS3-203ENST00000541591 FARP2O94887 1054 aaPredicted RBP16.92■□□□□ 0.3
SUDS3-203ENST00000541591 KIAA1755Q5JYT7 1200 aa16.92■□□□□ 0.3
SUDS3-203ENST00000541591 WDR78Q5VTH9 848 aa16.92■□□□□ 0.3
SUDS3-203ENST00000541591 GPRC5AQ8NFJ5 357 aa16.92■□□□□ 0.3
SUDS3-203ENST00000541591 TRIB2Q92519 343 aa16.92■□□□□ 0.3
SUDS3-203ENST00000541591 DPF3Q92784 378 aa16.92■□□□□ 0.3
SUDS3-203ENST00000541591 PCDH10Q9P2E7 1040 aa16.92■□□□□ 0.3
SUDS3-203ENST00000541591 SMCHD1A6NHR9 2005 aa16.91■□□□□ 0.3
SUDS3-203ENST00000541591 TFRCP02786 760 aaKnown RBP16.91■□□□□ 0.3
SUDS3-203ENST00000541591 RRP1P56182 461 aaKnown RBP16.91■□□□□ 0.3
SUDS3-203ENST00000541591 CCL14Q16627 93 aa16.91■□□□□ 0.3
SUDS3-203ENST00000541591 PXYLP1Q8TE99 480 aa16.91■□□□□ 0.3
SUDS3-203ENST00000541591 DIS3LQ8TF46 1054 aaKnown RBP16.91■□□□□ 0.3
SUDS3-203ENST00000541591 C12orf42Q96LP6 360 aa16.91■□□□□ 0.3
SUDS3-203ENST00000541591 CRBNQ96SW2 442 aa16.91■□□□□ 0.3
SUDS3-203ENST00000541591 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.91■□□□□ 0.3
SUDS3-203ENST00000541591 DCTPP1Q9H773 170 aa16.91■□□□□ 0.3
SUDS3-203ENST00000541591 CWC22Q9HCG8 908 aaKnown RBP16.91■□□□□ 0.3
SUDS3-203ENST00000541591 ECHDC1Q9NTX5 307 aa16.91■□□□□ 0.3
SUDS3-203ENST00000541591 TRIOBPQ9H2D6 2365 aa16.91■□□□□ 0.3
SUDS3-203ENST00000541591 USP17L15C9J2P7 530 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 USP17L13C9JLJ4 530 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 USP17L12C9JPN9 530 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 USP17L11C9JVI0 530 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 USP17L21D6R901 530 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 USP17L18D6R9N7 530 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 USP17L22D6RA61 530 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 USP17L17D6RBQ6 530 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 USP17L19D6RCP7 530 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 USP17L20D6RJB6 530 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 SGPL1O95470 568 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 HMGCRP04035 888 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 USP17L24Q0WX57 530 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 CATSPERGQ6ZRH7 1159 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 GPR142Q7Z601 462 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 CCAR1Q8IX12 1150 aaKnown RBP16.9■□□□□ 0.3
SUDS3-203ENST00000541591 KIAA1683Q9H0B3 1180 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 BTBD7Q9P203 1132 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 ZNF236Q9UL36 1845 aa16.9■□□□□ 0.3
SUDS3-203ENST00000541591 M0R2C6 588 aa16.89■□□□□ 0.29
SUDS3-203ENST00000541591 ATP2B2Q01814 1243 aa16.89■□□□□ 0.29
SUDS3-203ENST00000541591 UBE3CQ15386 1083 aa16.89■□□□□ 0.29
SUDS3-203ENST00000541591 TMED8Q6PL24 325 aaPredicted RBP16.89■□□□□ 0.29
SUDS3-203ENST00000541591 SPICE1Q8N0Z3 855 aa16.89■□□□□ 0.29
SUDS3-203ENST00000541591 NKX2-3Q8TAU0 364 aa16.89■□□□□ 0.29
SUDS3-203ENST00000541591 TANGO6Q9C0B7 1094 aa16.89■□□□□ 0.29
SUDS3-203ENST00000541591 PAK6Q9NQU5 681 aaPredicted RBP16.89■□□□□ 0.29
SUDS3-203ENST00000541591 SPDYE16A6NNV3 312 aaPredicted RBP16.88■□□□□ 0.29
SUDS3-203ENST00000541591 CDK8P49336 464 aa16.88■□□□□ 0.29
SUDS3-203ENST00000541591 USP14P54578 494 aa16.88■□□□□ 0.29
SUDS3-203ENST00000541591 C12orf60Q5U649 245 aa16.88■□□□□ 0.29
SUDS3-203ENST00000541591 UBE2Q1Q7Z7E8 422 aa16.88■□□□□ 0.29
SUDS3-203ENST00000541591 NUDT12Q9BQG2 462 aa16.88■□□□□ 0.29
SUDS3-203ENST00000541591 COLQQ9Y215 455 aaPredicted RBP16.88■□□□□ 0.29
SUDS3-203ENST00000541591 PRKAR2AP13861 404 aaKnown RBP16.87■□□□□ 0.29
SUDS3-203ENST00000541591 ICA1Q05084 483 aa16.87■□□□□ 0.29
SUDS3-203ENST00000541591 HABP4Q5JVS0 413 aaKnown RBP16.87■□□□□ 0.29
SUDS3-203ENST00000541591 CTR9Q6PD62 1173 aa16.87■□□□□ 0.29
SUDS3-203ENST00000541591 PLEKHH3Q7Z736 793 aa16.87■□□□□ 0.29
SUDS3-203ENST00000541591 OSBP2Q969R2 916 aa16.87■□□□□ 0.29
SUDS3-203ENST00000541591 PAWRQ96IZ0 340 aaKnown RBP16.87■□□□□ 0.29
SUDS3-203ENST00000541591 SEC62Q99442 399 aaKnown RBP16.87■□□□□ 0.29
SUDS3-203ENST00000541591 ATP8A2Q9NTI2 1148 aa16.87■□□□□ 0.29
SUDS3-203ENST00000541591 SWAP70Q9UH65 585 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms