RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 CALM2P0DP24 149 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 CALM3P0DP25 149 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 MMP14P50281 582 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 PPP2R5BQ15173 497 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 NTRK3Q16288 839 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 IFFO2Q5TF58 517 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 RCSD1Q6JBY9 416 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 NEDD1Q8NHV4 660 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 LMBRD1Q9NUN5 540 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 PI4KBQ9UBF8 816 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 ZNF70Q9UC06 446 aaPredicted RBP10.1□□□□□ -0.79
THBS3-210ENST00000541576 CLRN2A0PK11 232 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 TROAPQ12815 778 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 SPDYE2Q495Y8 402 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 CRACR2BQ8N4Y2 399 aaPredicted RBP10.1□□□□□ -0.79
THBS3-210ENST00000541576 ANKS1AQ92625 1134 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 KAT14Q9H8E8 782 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 ATP6V1DQ9Y5K8 247 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 GJA3Q9Y6H8 435 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 MYO1BO43795 1136 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 PRPF40AO75400 957 aaKnown RBP10.09□□□□□ -0.79
THBS3-210ENST00000541576 LMNB1P20700 586 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 FAM173BQ6P4H8 233 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 SH3BP5LQ7L8J4 393 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 MYOZ2Q9NPC6 264 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 STX8Q9UNK0 236 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 MYH8P13535 1937 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 TCP10L2B9ZVM9 353 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 IFNAR1P17181 557 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 SHMT1P34896 483 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 GMPSP49915 693 aaPredicted RBP10.09□□□□□ -0.79
THBS3-210ENST00000541576 PHKBQ93100 1093 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 TRIM34Q9BYJ4 488 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 VEZTQ9HBM0 779 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 GDPD2Q9HCC8 539 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 ATRNL1Q5VV63 1379 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 SHTN1A0MZ66 631 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 UBE2Q2LH0YL09 131 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 NASPP49321 788 aaPredicted RBP10.09□□□□□ -0.79
THBS3-210ENST00000541576 ZNF280AP59817 542 aaPredicted RBP10.09□□□□□ -0.79
THBS3-210ENST00000541576 OTUD7BQ6GQQ9 843 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 PNMA1Q8ND90 353 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 DPF2Q92785 391 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 ZBED3Q96IU2 234 aaPredicted RBP10.09□□□□□ -0.79
THBS3-210ENST00000541576 GJB4Q9NTQ9 266 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 RBM28Q9NW13 759 aaKnown RBP10.09□□□□□ -0.79
THBS3-210ENST00000541576 TAOK2Q9UL54 1235 aa10.09□□□□□ -0.79
THBS3-210ENST00000541576 DDX49Q9Y6V7 483 aaKnown RBP10.09□□□□□ -0.79
THBS3-210ENST00000541576 WNT10BO00744 389 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 COL2A1P02458 1487 aaPredicted RBP10.08□□□□□ -0.8
THBS3-210ENST00000541576 SLURP2P0DP57 97 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 AKR1B1P15121 316 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 GUCY1B3Q02153 619 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 FOXP4Q8IVH2 680 aaPredicted RBP10.08□□□□□ -0.8
THBS3-210ENST00000541576 CMTR1Q8N1G2 835 aaKnown RBP10.08□□□□□ -0.8
THBS3-210ENST00000541576 CTCFLQ8NI51 663 aaPredicted RBP10.08□□□□□ -0.8
THBS3-210ENST00000541576 AIFM3Q96NN9 605 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 PLIN4Q96Q06 1357 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 SLC26A6Q9BXS9 759 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 ZNF541Q9H0D2 1346 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 CNPY2Q9Y2B0 182 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 STK36Q9NRP7 1315 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 DNM1Q05193 864 aaKnown RBP10.08□□□□□ -0.8
THBS3-210ENST00000541576 SSRP1Q08945 709 aaKnown RBP10.08□□□□□ -0.8
THBS3-210ENST00000541576 FKBP1CQ5VVH2 108 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 TRIM22Q8IYM9 498 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 CEP95Q96GE4 821 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 C8orf76Q96K31 380 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 CSRNP1Q96S65 589 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 TMEM47Q9BQJ4 181 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 DNAJC18Q9H819 358 aa10.08□□□□□ -0.8
THBS3-210ENST00000541576 FMNL1O95466 1100 aaPredicted RBP10.07□□□□□ -0.8
THBS3-210ENST00000541576 PTMSP20962 102 aa10.07□□□□□ -0.8
THBS3-210ENST00000541576 NBPF9Q3BBW0 867 aa10.07□□□□□ -0.8
THBS3-210ENST00000541576 DNTTIP2Q5QJE6 756 aaKnown RBP10.07□□□□□ -0.8
THBS3-210ENST00000541576 MICALL2Q8IY33 904 aa10.07□□□□□ -0.8
THBS3-210ENST00000541576 CCDC82Q8N4S0 544 aa10.07□□□□□ -0.8
THBS3-210ENST00000541576 FAM151AQ8WW52 585 aa10.07□□□□□ -0.8
THBS3-210ENST00000541576 SIPA1L1O43166 1804 aa10.07□□□□□ -0.8
THBS3-210ENST00000541576 FAM196BA6NMK8 535 aa10.07□□□□□ -0.8
THBS3-210ENST00000541576 RESTQ13127 1097 aa10.07□□□□□ -0.8
THBS3-210ENST00000541576 RBM26Q5T8P6 1007 aaKnown RBP10.07□□□□□ -0.8
THBS3-210ENST00000541576 CCDC17Q96LX7 622 aa10.07□□□□□ -0.8
THBS3-210ENST00000541576 ALG1Q9BT22 464 aa10.07□□□□□ -0.8
THBS3-210ENST00000541576 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.07□□□□□ -0.8
THBS3-210ENST00000541576 PDCL3Q9H2J4 239 aa10.07□□□□□ -0.8
THBS3-210ENST00000541576 CNOT7Q9UIV1 285 aaKnown RBP10.07□□□□□ -0.8
THBS3-210ENST00000541576 DICER1Q9UPY3 1922 aaKnown RBP10.07□□□□□ -0.8
THBS3-210ENST00000541576 KIF5BP33176 963 aa10.07□□□□□ -0.8
THBS3-210ENST00000541576 NBPF11Q86T75 865 aa10.07□□□□□ -0.8
THBS3-210ENST00000541576 USP48Q86UV5 1035 aa10.07□□□□□ -0.8
THBS3-210ENST00000541576 RNF214Q8ND24 703 aa10.07□□□□□ -0.8
THBS3-210ENST00000541576 WASF1Q92558 559 aa10.07□□□□□ -0.8
THBS3-210ENST00000541576 MPHOSPH10O00566 681 aaKnown RBP10.06□□□□□ -0.8
THBS3-210ENST00000541576 TOP1P11387 765 aaKnown RBP10.06□□□□□ -0.8
THBS3-210ENST00000541576 NOVP48745 357 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 CERKLQ49MI3 558 aaPredicted RBP10.06□□□□□ -0.8
THBS3-210ENST00000541576 TMTC3Q6ZXV5 915 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 FAM83AQ86UY5 434 aa10.06□□□□□ -0.8
THBS3-210ENST00000541576 METTL16Q86W50 562 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms