RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 ATP1A3P13637 1013 aa13.39□□□□□ -0.27
EIF3A-203ENST00000541549 HNRNPH2P55795 449 aaKnown RBP13.39□□□□□ -0.27
EIF3A-203ENST00000541549 TRIM58Q8NG06 486 aa13.39□□□□□ -0.27
EIF3A-203ENST00000541549 SNX29Q8TEQ0 813 aa13.39□□□□□ -0.27
EIF3A-203ENST00000541549 TACO1Q9BSH4 297 aaKnown RBP13.39□□□□□ -0.27
EIF3A-203ENST00000541549 DBNLQ9UJU6 430 aaKnown RBP13.39□□□□□ -0.27
EIF3A-203ENST00000541549 CDC25BP30305 580 aa13.39□□□□□ -0.27
EIF3A-203ENST00000541549 ATP11AP98196 1134 aa13.39□□□□□ -0.27
EIF3A-203ENST00000541549 MORC3Q14149 939 aa13.39□□□□□ -0.27
EIF3A-203ENST00000541549 SPATA1Q5VX52 437 aa13.39□□□□□ -0.27
EIF3A-203ENST00000541549 PEX26Q7Z412 305 aa13.39□□□□□ -0.27
EIF3A-203ENST00000541549 PARD6BQ9BYG5 372 aa13.39□□□□□ -0.27
EIF3A-203ENST00000541549 ANKRD65E5RJM6 399 aa13.39□□□□□ -0.27
EIF3A-203ENST00000541549 LDHBP07195 334 aaKnown RBP13.39□□□□□ -0.27
EIF3A-203ENST00000541549 PNMA6AP0CW24 399 aaPredicted RBP13.39□□□□□ -0.27
EIF3A-203ENST00000541549 EIF6P56537 245 aaKnown RBP13.39□□□□□ -0.27
EIF3A-203ENST00000541549 CTNNA1P35221 906 aaKnown RBP13.39□□□□□ -0.27
EIF3A-203ENST00000541549 IRX5P78411 483 aaPredicted RBP13.39□□□□□ -0.27
EIF3A-203ENST00000541549 SLC39A14Q15043 492 aa13.39□□□□□ -0.27
EIF3A-203ENST00000541549 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.39□□□□□ -0.272e-12■□□□□ 10.4
EIF3A-203ENST00000541549 SAP30BPQ9UHR5 308 aaKnown RBP13.39□□□□□ -0.27
EIF3A-203ENST00000541549 ZBTB21Q9ULJ3 1066 aa13.39□□□□□ -0.27
EIF3A-203ENST00000541549 ZNF518AQ6AHZ1 1483 aa13.38□□□□□ -0.27
EIF3A-203ENST00000541549 EPB41P11171 864 aaKnown RBP13.38□□□□□ -0.27
EIF3A-203ENST00000541549 IL2RBP14784 551 aa13.38□□□□□ -0.27
EIF3A-203ENST00000541549 MICAL1Q8TDZ2 1067 aa13.38□□□□□ -0.27
EIF3A-203ENST00000541549 HAUS7Q99871 368 aa13.38□□□□□ -0.27
EIF3A-203ENST00000541549 TRIM7Q9C029 511 aa13.38□□□□□ -0.27
EIF3A-203ENST00000541549 GPCPD1Q9NPB8 672 aa13.38□□□□□ -0.27
EIF3A-203ENST00000541549 ZDHHC9Q9Y397 364 aa13.38□□□□□ -0.27
EIF3A-203ENST00000541549 CCDC151A5D8V7 595 aa13.38□□□□□ -0.27
EIF3A-203ENST00000541549 BUB1O43683 1085 aa13.38□□□□□ -0.27
EIF3A-203ENST00000541549 MRPL12P52815 198 aaKnown RBP13.38□□□□□ -0.27
EIF3A-203ENST00000541549 GYS2P54840 703 aa13.38□□□□□ -0.27
EIF3A-203ENST00000541549 UAP1Q16222 522 aaPredicted RBP13.38□□□□□ -0.27
EIF3A-203ENST00000541549 NBPF14Q5TI25 921 aa13.38□□□□□ -0.27
EIF3A-203ENST00000541549 ADCY9O60503 1353 aa13.38□□□□□ -0.27
EIF3A-203ENST00000541549 RFC4P35249 363 aa13.38□□□□□ -0.27
EIF3A-203ENST00000541549 STMN2Q93045 179 aa13.38□□□□□ -0.27
EIF3A-203ENST00000541549 ASIC3Q9UHC3 531 aa13.38□□□□□ -0.27
EIF3A-203ENST00000541549 SH3TC1Q8TE82 1336 aa13.38□□□□□ -0.27
EIF3A-203ENST00000541549 CTTNBP2Q8WZ74 1663 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 CABP7Q86V35 215 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 SMYD4Q8IYR2 804 aaPredicted RBP13.37□□□□□ -0.27
EIF3A-203ENST00000541549 LINC00301Q8NCQ3 95 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.37□□□□□ -0.27
EIF3A-203ENST00000541549 NONOQ15233 471 aaKnown RBP eCLIP13.37□□□□□ -0.27
EIF3A-203ENST00000541549 TRIML1Q8N9V2 468 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 SLC52A2Q9HAB3 445 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 AATFQ9NY61 560 aaKnown RBP eCLIP13.37□□□□□ -0.27
EIF3A-203ENST00000541549 CTTNBP2NLQ9P2B4 639 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 ARID4AP29374 1257 aaPredicted RBP13.37□□□□□ -0.27
EIF3A-203ENST00000541549 DNM2P50570 870 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 SFMBT2Q5VUG0 894 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 FANCBQ8NB91 859 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 MGARPQ8TDB4 240 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 IMPG2Q9BZV3 1241 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 FRMD4BQ9Y2L6 1034 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 WDR7Q9Y4E6 1490 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 KIAA0556O60303 1618 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 ASXL2Q76L83 1435 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 KCNK3O14649 394 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 ZNF365Q70YC5 407 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 LPIN2Q92539 896 aa13.37□□□□□ -0.27
EIF3A-203ENST00000541549 ATP8B1O43520 1251 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 FLOT1O75955 427 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 PPP2R5BQ15173 497 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 LRRC24Q50LG9 513 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 FAM47AQ5JRC9 791 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 APBB1IPQ7Z5R6 666 aaPredicted RBP13.36□□□□□ -0.27
EIF3A-203ENST00000541549 GRAMD1CQ8IYS0 662 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 HYOU1Q9Y4L1 999 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 MAGI3Q5TCQ9 1506 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 PROSER3Q2NL68 480 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 FCHSD1Q86WN1 690 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 SPATA5Q8NB90 893 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 KDM6BO15054 1643 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 IKBKBO14920 756 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 RNF40O75150 1001 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 PPFIA4O75335 1185 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 TCP1P17987 556 aaKnown RBP13.36□□□□□ -0.27
EIF3A-203ENST00000541549 E2F4Q16254 413 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 DPH6Q7L8W6 267 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 SPATA24Q86W54 205 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 CCDC105Q8IYK2 499 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 CCDC170Q8IYT3 715 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 CACNA2D3Q8IZS8 1091 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 TSKSQ9UJT2 592 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 STK38LQ9Y2H1 464 aa13.36□□□□□ -0.27
EIF3A-203ENST00000541549 UHMK1Q8TAS1 419 aaKnown RBP13.35□□□□□ -0.27
EIF3A-203ENST00000541549 ARHGEF2Q92974 986 aaKnown RBP13.35□□□□□ -0.27
EIF3A-203ENST00000541549 POLR3EQ9NVU0 708 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 CARMIL3Q8ND23 1372 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 KDM5CP41229 1560 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 ATP5DP30049 168 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 PTGDRQ13258 359 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 PHLPP2Q6ZVD8 1323 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 H7C1D1 291 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 CHMP2AO43633 222 aa13.35□□□□□ -0.27
EIF3A-203ENST00000541549 ZNF853P0CG23 659 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms