RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 POLA2Q14181 598 aa14.54□□□□□ -0.08
COPA-205ENST00000541366 METTL16Q86W50 562 aaKnown RBP14.54□□□□□ -0.08
COPA-205ENST00000541366 LPAR1Q92633 364 aa14.54□□□□□ -0.08
COPA-205ENST00000541366 BADQ92934 168 aa14.54□□□□□ -0.08
COPA-205ENST00000541366 DHX36Q9H2U1 1008 aaKnown RBP14.54□□□□□ -0.08
COPA-205ENST00000541366 PRDM5Q9NQX1 630 aaPredicted RBP14.54□□□□□ -0.08
COPA-205ENST00000541366 RLFQ13129 1914 aa14.54□□□□□ -0.08
COPA-205ENST00000541366 SLC15A5A6NIM6 579 aa14.53□□□□□ -0.08
COPA-205ENST00000541366 DNM1LO00429 736 aa14.53□□□□□ -0.08
COPA-205ENST00000541366 GH2P01242 217 aa14.53□□□□□ -0.08
COPA-205ENST00000541366 ATP2B2Q01814 1243 aa14.53□□□□□ -0.08
COPA-205ENST00000541366 ALDH1L2Q3SY69 923 aa14.53□□□□□ -0.08
COPA-205ENST00000541366 USP17L2Q6R6M4 530 aa14.53□□□□□ -0.08
COPA-205ENST00000541366 SH3RF1Q7Z6J0 888 aa14.53□□□□□ -0.08
COPA-205ENST00000541366 FOXP4Q8IVH2 680 aaPredicted RBP14.53□□□□□ -0.08
COPA-205ENST00000541366 TRIM34Q9BYJ4 488 aa14.53□□□□□ -0.08
COPA-205ENST00000541366 BTBD7Q9P203 1132 aa14.53□□□□□ -0.08
COPA-205ENST00000541366 RABGAP1Q9Y3P9 1069 aa14.53□□□□□ -0.08
COPA-205ENST00000541366 MYO5AQ9Y4I1 1855 aaKnown RBP14.52□□□□□ -0.08
COPA-205ENST00000541366 E9PSI1 815 aa14.52□□□□□ -0.09
COPA-205ENST00000541366 ANP32CO43423 234 aa14.52□□□□□ -0.09
COPA-205ENST00000541366 DYNLL1P63167 89 aaKnown RBP14.52□□□□□ -0.09
COPA-205ENST00000541366 SLFN5Q08AF3 891 aa14.52□□□□□ -0.09
COPA-205ENST00000541366 TRIM60Q495X7 471 aa14.52□□□□□ -0.09
COPA-205ENST00000541366 NAA16Q6N069 864 aaPredicted RBP14.52□□□□□ -0.09
COPA-205ENST00000541366 SLC39A5Q6ZMH5 540 aa14.52□□□□□ -0.09
COPA-205ENST00000541366 GTF3C2Q8WUA4 911 aaPredicted RBP14.52□□□□□ -0.09
COPA-205ENST00000541366 CDCA7LQ96GN5 454 aa14.52□□□□□ -0.09
COPA-205ENST00000541366 NOL10Q9BSC4 688 aaKnown RBP14.52□□□□□ -0.09
COPA-205ENST00000541366 FOCADQ5VW36 1801 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 TRIM43BA6NCK2 446 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 USP17L15C9J2P7 530 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 USP17L13C9JLJ4 530 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 USP17L11C9JVI0 530 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 USP17L18D6R9N7 530 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 USP17L22D6RA61 530 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 USP17L17D6RBQ6 530 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 USP17L19D6RCP7 530 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 USP17L20D6RJB6 530 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 IGHA2P01877 340 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 CYBAP13498 195 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 FOSL2P15408 326 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 PPP4CP60510 307 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 CCNA1P78396 465 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 USP17L24Q0WX57 530 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 GRB14Q14449 540 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 CATSPERGQ6ZRH7 1159 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 USP38Q8NB14 1042 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 ACER1Q8TDN7 264 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 FERMT2Q96AC1 680 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 TRIM43Q96BQ3 446 aaPredicted RBP14.51□□□□□ -0.09
COPA-205ENST00000541366 PDLIM7Q9NR12 457 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 RAPGEFL1Q9UHV5 662 aa14.51□□□□□ -0.09
COPA-205ENST00000541366 MSCO60682 206 aa14.5□□□□□ -0.09
COPA-205ENST00000541366 GLRX3O76003 335 aaKnown RBP14.5□□□□□ -0.09
COPA-205ENST00000541366 BAG3O95817 575 aa14.5□□□□□ -0.09
COPA-205ENST00000541366 HOXC6P09630 235 aa14.5□□□□□ -0.09
COPA-205ENST00000541366 VCAM1P19320 739 aa14.5□□□□□ -0.09
COPA-205ENST00000541366 ITGB8P26012 769 aa14.5□□□□□ -0.09
COPA-205ENST00000541366 PRAMEF19Q5SWL8 479 aa14.5□□□□□ -0.09
COPA-205ENST00000541366 C12orf42Q96LP6 360 aa14.5□□□□□ -0.09
COPA-205ENST00000541366 FEZ1Q99689 392 aa14.5□□□□□ -0.09
COPA-205ENST00000541366 GINM1Q9NU53 330 aa14.5□□□□□ -0.09
COPA-205ENST00000541366 IVNS1ABPQ9Y6Y0 642 aa14.5□□□□□ -0.09
COPA-205ENST00000541366 SPDYE16A6NNV3 312 aaPredicted RBP14.49□□□□□ -0.09
COPA-205ENST00000541366 CYP2E1P05181 493 aaPredicted RBP14.49□□□□□ -0.09
COPA-205ENST00000541366 ADCYAP1R1P41586 468 aa14.49□□□□□ -0.09
COPA-205ENST00000541366 EPHB4P54760 987 aa14.49□□□□□ -0.09
COPA-205ENST00000541366 SMAD3P84022 425 aaKnown RBP14.49□□□□□ -0.09
COPA-205ENST00000541366 RAB3GAP1Q15042 981 aa14.49□□□□□ -0.09
COPA-205ENST00000541366 PNMA6EA0A0J9YXQ4 647 aa14.48□□□□□ -0.09
COPA-205ENST00000541366 KBTBD13C9JR72 458 aa14.48□□□□□ -0.09
COPA-205ENST00000541366 HLA-DOAP06340 250 aa14.48□□□□□ -0.09
COPA-205ENST00000541366 UQCRFS1P1P0C7P4 283 aa14.48□□□□□ -0.09
COPA-205ENST00000541366 PLCG2P16885 1265 aa14.48□□□□□ -0.09
COPA-205ENST00000541366 COL9A1P20849 921 aa14.48□□□□□ -0.09
COPA-205ENST00000541366 MTX1Q13505 466 aa14.48□□□□□ -0.09
COPA-205ENST00000541366 ARRDC4Q8NCT1 418 aa14.48□□□□□ -0.09
COPA-205ENST00000541366 PIH1D3Q9NQM4 214 aaKnown RBP14.48□□□□□ -0.09
COPA-205ENST00000541366 HDAC5Q9UQL6 1122 aa14.48□□□□□ -0.09
COPA-205ENST00000541366 MYH1P12882 1939 aa14.48□□□□□ -0.09
COPA-205ENST00000541366 SMCHD1A6NHR9 2005 aa14.48□□□□□ -0.09
COPA-205ENST00000541366 MYO9BQ13459 2157 aa14.47□□□□□ -0.09
COPA-205ENST00000541366 COBLO75128 1261 aa14.47□□□□□ -0.09
COPA-205ENST00000541366 ADORA2AP29274 412 aa14.47□□□□□ -0.09
COPA-205ENST00000541366 TLE2Q04725 743 aa14.47□□□□□ -0.09
COPA-205ENST00000541366 GRIN2CQ14957 1233 aa14.47□□□□□ -0.09
COPA-205ENST00000541366 SNX17Q15036 470 aa14.47□□□□□ -0.09
COPA-205ENST00000541366 LRRC41Q15345 812 aa14.47□□□□□ -0.09
COPA-205ENST00000541366 TTC39AQ5SRH9 613 aa14.47□□□□□ -0.09
COPA-205ENST00000541366 TATDN1Q6P1N9 297 aa14.47□□□□□ -0.09
COPA-205ENST00000541366 LBX2Q6XYB7 198 aa14.47□□□□□ -0.09
COPA-205ENST00000541366 DPP9Q86TI2 863 aa14.47□□□□□ -0.09
COPA-205ENST00000541366 MIGA1Q8NAN2 632 aa14.47□□□□□ -0.09
COPA-205ENST00000541366 DBNDD2Q9BQY9 259 aa14.47□□□□□ -0.09
COPA-205ENST00000541366 MOV10L1Q9BXT6 1211 aaKnown RBP14.47□□□□□ -0.09
COPA-205ENST00000541366 API5Q9BZZ5 524 aaKnown RBP14.47□□□□□ -0.09
COPA-205ENST00000541366 RPAP3Q9H6T3 665 aaPredicted RBP14.47□□□□□ -0.09
COPA-205ENST00000541366 ZAP70P43403 619 aa14.46□□□□□ -0.09
COPA-205ENST00000541366 G3BP1Q13283 466 aaKnown RBP eCLIP14.46□□□□□ -0.097e-14■■■■□ 19.5
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms