RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 CARD8Q9Y2G2 431 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 USP31Q70CQ4 1352 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 PIK3C2AO00443 1686 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 FIBPO43427 364 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 SNX1Q13596 522 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 TCEAL1Q15170 157 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 RASA2Q15283 850 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 CCDC150Q8NCX0 1101 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 MSANTD4Q8NCY6 345 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 FBXO18Q8NFZ0 1043 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 SH3TC2Q8TF17 1288 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 ZBTB10Q96DT7 871 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 CASS4Q9NQ75 786 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 A1CFQ9NQ94 594 aaKnown RBP6.97□□□□□ -1.29
LMO3-225ENST00000541295 MIS18AQ9NYP9 233 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 PPP1R9AQ9ULJ8 1098 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 GOLGA6L4A6NEF3 574 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 HDAC4P56524 1084 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 ITIH3Q06033 890 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 USP4Q13107 963 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 SYCP2LQ5T4T6 812 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 ARHGAP22Q7Z5H3 698 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 PARD3BQ8TEW8 1205 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 TTC14Q96N46 770 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 IER2Q9BTL4 223 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 MBIPQ9NS73 344 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 KCTD5Q9NXV2 234 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 DKK3Q9UBP4 350 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 INTUQ9ULD6 942 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 PAIP2BQ9ULR5 123 aaKnown RBP6.97□□□□□ -1.29
LMO3-225ENST00000541295 PEAK1Q9H792 1746 aa6.97□□□□□ -1.29
LMO3-225ENST00000541295 KIF2AO00139 706 aaPredicted RBP6.96□□□□□ -1.29
LMO3-225ENST00000541295 CPLX1O14810 134 aa6.96□□□□□ -1.29
LMO3-225ENST00000541295 SPTLC2O15270 562 aa6.96□□□□□ -1.29
LMO3-225ENST00000541295 CLNS1AP54105 237 aaKnown RBP6.96□□□□□ -1.29
LMO3-225ENST00000541295 GNAI1P63096 354 aa6.96□□□□□ -1.29
LMO3-225ENST00000541295 KRT24Q2M2I5 525 aa6.96□□□□□ -1.29
LMO3-225ENST00000541295 ATF7IPQ6VMQ6 1270 aa6.96□□□□□ -1.29
LMO3-225ENST00000541295 RSPH3Q86UC2 560 aa6.96□□□□□ -1.29
LMO3-225ENST00000541295 C11orf74Q86VG3 221 aa6.96□□□□□ -1.29
LMO3-225ENST00000541295 ITPRIPQ8IWB1 547 aa6.96□□□□□ -1.29
LMO3-225ENST00000541295 TSPYL6Q8N831 410 aa6.96□□□□□ -1.29
LMO3-225ENST00000541295 CABLES1Q8TDN4 633 aa6.96□□□□□ -1.29
LMO3-225ENST00000541295 LRRC59Q96AG4 307 aaKnown RBP6.96□□□□□ -1.29
LMO3-225ENST00000541295 PAPOLAP51003 745 aaKnown RBP6.96□□□□□ -1.3
LMO3-225ENST00000541295 SUZ12Q15022 739 aaKnown RBP6.96□□□□□ -1.3
LMO3-225ENST00000541295 NLGN1Q8N2Q7 840 aa6.96□□□□□ -1.3
LMO3-225ENST00000541295 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.96□□□□□ -1.3
LMO3-225ENST00000541295 IRX2Q9BZI1 471 aaPredicted RBP6.96□□□□□ -1.3
LMO3-225ENST00000541295 KIF9Q9HAQ2 790 aa6.96□□□□□ -1.3
LMO3-225ENST00000541295 AASDHPPTQ9NRN7 309 aa6.96□□□□□ -1.3
LMO3-225ENST00000541295 HELLSQ9NRZ9 838 aa6.96□□□□□ -1.3
LMO3-225ENST00000541295 ZNF446Q9NWS9 450 aa6.96□□□□□ -1.3
LMO3-225ENST00000541295 ZNF335Q9H4Z2 1342 aaPredicted RBP6.96□□□□□ -1.3
LMO3-225ENST00000541295 FOXN3O00409 490 aaPredicted RBP6.96□□□□□ -1.3
LMO3-225ENST00000541295 AKR1B10O60218 316 aa6.96□□□□□ -1.3
LMO3-225ENST00000541295 ADD2P35612 726 aa6.96□□□□□ -1.3
LMO3-225ENST00000541295 MTHFSDQ2M296 383 aaKnown RBP6.96□□□□□ -1.3
LMO3-225ENST00000541295 CAPRIN2Q6IMN6 1127 aaKnown RBP6.96□□□□□ -1.3
LMO3-225ENST00000541295 SLC7A5P1Q8MH63 180 aa6.96□□□□□ -1.3
LMO3-225ENST00000541295 ZNF496Q96IT1 587 aaPredicted RBP6.96□□□□□ -1.3
LMO3-225ENST00000541295 SLKQ9H2G2 1235 aaPredicted RBP6.96□□□□□ -1.3
LMO3-225ENST00000541295 ZSWIM4Q9H7M6 989 aa6.96□□□□□ -1.3
LMO3-225ENST00000541295 EPB41L4AQ9HCS5 686 aaPredicted RBP6.96□□□□□ -1.3
LMO3-225ENST00000541295 NOB1Q9ULX3 412 aaKnown RBP6.96□□□□□ -1.3
LMO3-225ENST00000541295 CPP00450 1065 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 CUL4BQ13620 913 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 RAPGEF1Q13905 1077 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 CLPPQ16740 277 aaPredicted RBP6.95□□□□□ -1.3
LMO3-225ENST00000541295 CCBE1Q6UXH8 406 aaPredicted RBP6.95□□□□□ -1.3
LMO3-225ENST00000541295 DZIP1LQ8IYY4 767 aaKnown RBP6.95□□□□□ -1.3
LMO3-225ENST00000541295 TEX19Q8NA77 164 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 APPL2Q8NEU8 664 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 DYDC1Q8WWB3 177 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 SPOCK2Q92563 424 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 TMEM87BQ96K49 555 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 PCDH12Q9NPG4 1184 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 MSH6P52701 1360 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 MUSKO15146 869 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 PRPF40AO75400 957 aaKnown RBP6.95□□□□□ -1.3
LMO3-225ENST00000541295 GCP02774 474 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 FERP16591 822 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 UBXN2AP68543 259 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 LRRFIP1Q32MZ4 808 aaKnown RBP6.95□□□□□ -1.3
LMO3-225ENST00000541295 TWISTNBQ3B726 338 aaPredicted RBP6.95□□□□□ -1.3
LMO3-225ENST00000541295 ZNF397Q8NF99 534 aaPredicted RBP6.95□□□□□ -1.3
LMO3-225ENST00000541295 LRRC45Q96CN5 670 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.95□□□□□ -1.3
LMO3-225ENST00000541295 TTC12Q9H892 705 aaPredicted RBP6.95□□□□□ -1.3
LMO3-225ENST00000541295 CROTQ9UKG9 612 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.95□□□□□ -1.3
LMO3-225ENST00000541295 C1orf167Q5SNV9 1468 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 USP11P51784 963 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 PDE3AQ14432 1141 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 SMC1AQ14683 1233 aaKnown RBP6.95□□□□□ -1.3
LMO3-225ENST00000541295 IRGCQ6NXR0 463 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 FAM117BQ6P1L5 589 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 KIAA1524Q8TCG1 905 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 BICD2Q8TD16 824 aa6.95□□□□□ -1.3
LMO3-225ENST00000541295 APPBP2Q92624 585 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms