RNA–Protein interactions for RNA: ENST00000541182.1

ARF1-214, Transcript of ADP ribosylation factor 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARF1, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-214ENST00000541182 TDRD3Q9H7E2 651 aaKnown RBP20.56■□□□□ 0.88
ARF1-214ENST00000541182 HDAC9Q9UKV0 1011 aa20.56■□□□□ 0.88
ARF1-214ENST00000541182 ELP1O95163 1332 aa20.56■□□□□ 0.88
ARF1-214ENST00000541182 GUCY1A2P33402 732 aa20.56■□□□□ 0.88
ARF1-214ENST00000541182 UBE2HP62256 183 aa20.56■□□□□ 0.88
ARF1-214ENST00000541182 KRT40Q6A162 431 aa20.56■□□□□ 0.88
ARF1-214ENST00000541182 TMTC3Q6ZXV5 915 aa20.56■□□□□ 0.88
ARF1-214ENST00000541182 ZBTB12Q9Y330 459 aaPredicted RBP20.56■□□□□ 0.88
ARF1-214ENST00000541182 PLIN4Q96Q06 1357 aa20.56■□□□□ 0.88
ARF1-214ENST00000541182 PLEKHA8P1O95397 391 aa20.55■□□□□ 0.88
ARF1-214ENST00000541182 CXCL9Q07325 125 aa20.55■□□□□ 0.88
ARF1-214ENST00000541182 TCP10Q12799 353 aa20.55■□□□□ 0.88
ARF1-214ENST00000541182 TRIM29Q14134 588 aa20.55■□□□□ 0.88
ARF1-214ENST00000541182 CAVIN1Q6NZI2 390 aaKnown RBP20.55■□□□□ 0.88
ARF1-214ENST00000541182 OGFOD1Q8N543 542 aa20.55■□□□□ 0.88
ARF1-214ENST00000541182 AGBL3Q8NEM8 1001 aa20.55■□□□□ 0.88
ARF1-214ENST00000541182 JDP2Q8WYK2 163 aa20.55■□□□□ 0.88
ARF1-214ENST00000541182 TMEM47Q9BQJ4 181 aa20.55■□□□□ 0.88
ARF1-214ENST00000541182 CFAP45Q9UL16 551 aa20.55■□□□□ 0.88
ARF1-214ENST00000541182 STX8Q9UNK0 236 aa20.55■□□□□ 0.88
ARF1-214ENST00000541182 KIF23Q02241 960 aaPredicted RBP20.54■□□□□ 0.88
ARF1-214ENST00000541182 ATL3Q6DD88 541 aa20.54■□□□□ 0.88
ARF1-214ENST00000541182 LTBP3Q9NS15 1303 aa20.54■□□□□ 0.88
ARF1-214ENST00000541182 SPDYE2BA6NHP3 402 aa20.54■□□□□ 0.88
ARF1-214ENST00000541182 SPDYE6P0CI01 402 aa20.54■□□□□ 0.88
ARF1-214ENST00000541182 KIF5BP33176 963 aa20.54■□□□□ 0.88
ARF1-214ENST00000541182 SHMT1P34896 483 aa20.54■□□□□ 0.88
ARF1-214ENST00000541182 NOVP48745 357 aa20.54■□□□□ 0.88
ARF1-214ENST00000541182 BRAPQ7Z569 592 aa20.54■□□□□ 0.88
ARF1-214ENST00000541182 SPATA32Q96LK8 384 aa20.54■□□□□ 0.88
ARF1-214ENST00000541182 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.54■□□□□ 0.88
ARF1-214ENST00000541182 DDTLA6NHG4 134 aaPredicted RBP20.53■□□□□ 0.88
ARF1-214ENST00000541182 PRPF3O43395 683 aaKnown RBP20.53■□□□□ 0.88
ARF1-214ENST00000541182 SH3BP5LQ7L8J4 393 aa20.53■□□□□ 0.88
ARF1-214ENST00000541182 NLGN2Q8NFZ4 835 aa20.53■□□□□ 0.88
ARF1-214ENST00000541182 LEO1Q8WVC0 666 aaPredicted RBP20.53■□□□□ 0.88
ARF1-214ENST00000541182 CEP95Q96GE4 821 aa20.53■□□□□ 0.88
ARF1-214ENST00000541182 GREB1LQ9C091 1923 aaPredicted RBP20.53■□□□□ 0.88
ARF1-214ENST00000541182 ENTPD3O75355 529 aa20.53■□□□□ 0.88
ARF1-214ENST00000541182 AKAP17AQ02040 695 aaKnown RBP20.53■□□□□ 0.88
ARF1-214ENST00000541182 CIAPIN1Q6FI81 312 aa20.53■□□□□ 0.88
ARF1-214ENST00000541182 SRBD1Q8N5C6 995 aaKnown RBP20.53■□□□□ 0.88
ARF1-214ENST00000541182 ZNF396Q96N95 335 aaPredicted RBP20.53■□□□□ 0.88
ARF1-214ENST00000541182 PI4KBQ9UBF8 816 aa20.53■□□□□ 0.88
ARF1-214ENST00000541182 KIF28PB7ZC32 967 aa20.52■□□□□ 0.88
ARF1-214ENST00000541182 AKR1B1P15121 316 aa20.52■□□□□ 0.88
ARF1-214ENST00000541182 DEKP35659 375 aaKnown RBP20.52■□□□□ 0.88
ARF1-214ENST00000541182 DLGAP5Q15398 846 aa20.52■□□□□ 0.88
ARF1-214ENST00000541182 TAOK2Q9UL54 1235 aa20.52■□□□□ 0.88
ARF1-214ENST00000541182 BAZ2BQ9UIF8 2168 aaKnown RBP20.52■□□□□ 0.88
ARF1-214ENST00000541182 CNTNAP5Q8WYK1 1306 aa20.51■□□□□ 0.87
ARF1-214ENST00000541182 GRM4Q14833 912 aa20.51■□□□□ 0.87
ARF1-214ENST00000541182 PKN1Q16512 942 aa20.51■□□□□ 0.87
ARF1-214ENST00000541182 ZSCAN29Q8IWY8 852 aaPredicted RBP20.51■□□□□ 0.87
ARF1-214ENST00000541182 V9GY48 417 aaPredicted RBP20.51■□□□□ 0.87
ARF1-214ENST00000541182 COL2A1P02458 1487 aaPredicted RBP20.51■□□□□ 0.87
ARF1-214ENST00000541182 ATRNL1Q5VV63 1379 aa20.51■□□□□ 0.87
ARF1-214ENST00000541182 IGKV6D-41A0A0C4DH26 115 aa20.51■□□□□ 0.87
ARF1-214ENST00000541182 TOP1P11387 765 aaKnown RBP20.51■□□□□ 0.87
ARF1-214ENST00000541182 MTMR14Q8NCE2 650 aa20.51■□□□□ 0.87
ARF1-214ENST00000541182 DNAJC18Q9H819 358 aa20.51■□□□□ 0.87
ARF1-214ENST00000541182 SPON1Q9HCB6 807 aa20.51■□□□□ 0.87
ARF1-214ENST00000541182 MTMR4Q9NYA4 1195 aa20.51■□□□□ 0.87
ARF1-214ENST00000541182 TMEM63CQ9P1W3 806 aa20.51■□□□□ 0.87
ARF1-214ENST00000541182 RBM27Q9P2N5 1060 aaKnown RBP20.51■□□□□ 0.87
ARF1-214ENST00000541182 MMP1P03956 469 aa20.5■□□□□ 0.87
ARF1-214ENST00000541182 USP28Q96RU2 1077 aa20.5■□□□□ 0.87
ARF1-214ENST00000541182 TMOD2Q9NZR1 351 aa20.5■□□□□ 0.87
ARF1-214ENST00000541182 MAD2L2Q9UI95 211 aa20.5■□□□□ 0.87
ARF1-214ENST00000541182 U2AF2P26368 475 aaKnown RBP eCLIP20.49■□□□□ 0.87
ARF1-214ENST00000541182 TNIP1Q15025 636 aa20.49■□□□□ 0.87
ARF1-214ENST00000541182 MYSM1Q5VVJ2 828 aa20.49■□□□□ 0.87
ARF1-214ENST00000541182 FOXP4Q8IVH2 680 aaPredicted RBP20.49■□□□□ 0.87
ARF1-214ENST00000541182 RCOR1Q9UKL0 485 aa20.49■□□□□ 0.87
ARF1-214ENST00000541182 MYH4Q9Y623 1939 aa20.49■□□□□ 0.87
ARF1-214ENST00000541182 SLURP2P0DP57 97 aa20.49■□□□□ 0.87
ARF1-214ENST00000541182 GNAQP50148 359 aa20.49■□□□□ 0.87
ARF1-214ENST00000541182 CEBPZQ03701 1054 aaKnown RBP20.49■□□□□ 0.87
ARF1-214ENST00000541182 ZSCAN23Q3MJ62 389 aa20.49■□□□□ 0.87
ARF1-214ENST00000541182 METTL16Q86W50 562 aaKnown RBP20.49■□□□□ 0.87
ARF1-214ENST00000541182 STAG2Q8N3U4 1231 aa20.49■□□□□ 0.87
ARF1-214ENST00000541182 CCDC17Q96LX7 622 aa20.49■□□□□ 0.87
ARF1-214ENST00000541182 FTOQ9C0B1 505 aaKnown RBP eCLIP20.49■□□□□ 0.87
ARF1-214ENST00000541182 ZNF70Q9UC06 446 aaPredicted RBP20.49■□□□□ 0.87
ARF1-214ENST00000541182 hCG_1642624A0A1W2PR95 340 aa20.48■□□□□ 0.87
ARF1-214ENST00000541182 PALM3A6NDB9 673 aaPredicted RBP20.48■□□□□ 0.87
ARF1-214ENST00000541182 RASSF7Q02833 373 aa20.48■□□□□ 0.87
ARF1-214ENST00000541182 KCNJ14Q9UNX9 436 aa20.48■□□□□ 0.87
ARF1-214ENST00000541182 XBP1P17861 261 aa20.48■□□□□ 0.87
ARF1-214ENST00000541182 GNL2Q13823 731 aaKnown RBP20.48■□□□□ 0.87
ARF1-214ENST00000541182 SAFBQ15424 915 aaKnown RBP eCLIP20.48■□□□□ 0.87
ARF1-214ENST00000541182 SPDYE2Q495Y8 402 aa20.48■□□□□ 0.87
ARF1-214ENST00000541182 RTEL1Q9NZ71 1219 aa20.48■□□□□ 0.87
ARF1-214ENST00000541182 CLRN2A0PK11 232 aa20.47■□□□□ 0.87
ARF1-214ENST00000541182 PRELPP51888 382 aa20.47■□□□□ 0.87
ARF1-214ENST00000541182 TPRNQ4KMQ1 711 aa20.47■□□□□ 0.87
ARF1-214ENST00000541182 TATDN1Q6P1N9 297 aa20.47■□□□□ 0.87
ARF1-214ENST00000541182 SYAP1Q96A49 352 aaPredicted RBP20.47■□□□□ 0.87
ARF1-214ENST00000541182 FAM196BA6NMK8 535 aa20.46■□□□□ 0.87
ARF1-214ENST00000541182 TCP10L2B9ZVM9 353 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms