RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 ACER1Q8TDN7 264 aa29.14■■■□□ 2.26
LEMD3-203ENST00000541171 RIOK1Q9BRS2 568 aaKnown RBP29.14■■■□□ 2.26
LEMD3-203ENST00000541171 CABP5Q9NP86 173 aa29.14■■■□□ 2.26
LEMD3-203ENST00000541171 XRCC5P13010 732 aaKnown RBP29.13■■■□□ 2.25
LEMD3-203ENST00000541171 ZKSCAN1P17029 563 aaPredicted RBP29.13■■■□□ 2.25
LEMD3-203ENST00000541171 TTF1Q15361 905 aaPredicted RBP29.13■■■□□ 2.25
LEMD3-203ENST00000541171 SLC9C2Q5TAH2 1124 aa29.13■■■□□ 2.25
LEMD3-203ENST00000541171 TMED8Q6PL24 325 aaPredicted RBP29.13■■■□□ 2.25
LEMD3-203ENST00000541171 C7orf61Q8IZ16 206 aa29.13■■■□□ 2.25
LEMD3-203ENST00000541171 C12orf42Q96LP6 360 aa29.13■■■□□ 2.25
LEMD3-203ENST00000541171 NBPF3Q9H094 633 aa29.13■■■□□ 2.25
LEMD3-203ENST00000541171 STAP2Q9UGK3 403 aa29.13■■■□□ 2.25
LEMD3-203ENST00000541171 USP14P54578 494 aa29.12■■■□□ 2.25
LEMD3-203ENST00000541171 CLASRPQ8N2M8 674 aaKnown RBP29.12■■■□□ 2.25
LEMD3-203ENST00000541171 DNAJC2Q99543 621 aaKnown RBP29.12■■■□□ 2.25
LEMD3-203ENST00000541171 ZBED9Q6R2W3 1325 aa29.12■■■□□ 2.25
LEMD3-203ENST00000541171 PDE6AP16499 860 aa29.11■■■□□ 2.25
LEMD3-203ENST00000541171 SHMT1P34896 483 aa29.11■■■□□ 2.25
LEMD3-203ENST00000541171 RGS2P41220 211 aa29.11■■■□□ 2.25
LEMD3-203ENST00000541171 CCL14Q16627 93 aa29.11■■■□□ 2.25
LEMD3-203ENST00000541171 MAP3K21Q5TCX8 1036 aa29.11■■■□□ 2.25
LEMD3-203ENST00000541171 WDR78Q5VTH9 848 aa29.11■■■□□ 2.25
LEMD3-203ENST00000541171 CATSPERGQ6ZRH7 1159 aa29.11■■■□□ 2.25
LEMD3-203ENST00000541171 USP6NLQ92738 828 aa29.11■■■□□ 2.25
LEMD3-203ENST00000541171 C11orf49Q9H6J7 331 aa29.11■■■□□ 2.25
LEMD3-203ENST00000541171 RABGAP1Q9Y3P9 1069 aa29.11■■■□□ 2.25
LEMD3-203ENST00000541171 GOLIM4O00461 696 aa29.1■■■□□ 2.25
LEMD3-203ENST00000541171 CNMDO75829 334 aa29.1■■■□□ 2.25
LEMD3-203ENST00000541171 MNX1P50219 401 aaPredicted RBP29.1■■■□□ 2.25
LEMD3-203ENST00000541171 CACNB2Q08289 660 aaPredicted RBP29.1■■■□□ 2.25
LEMD3-203ENST00000541171 MORN1Q5T089 497 aa29.1■■■□□ 2.25
LEMD3-203ENST00000541171 TRMT44Q8IYL2 757 aaKnown RBP29.1■■■□□ 2.25
LEMD3-203ENST00000541171 CRNKL1Q9BZJ0 848 aaKnown RBP29.1■■■□□ 2.25
LEMD3-203ENST00000541171 KIAA1683Q9H0B3 1180 aa29.1■■■□□ 2.25
LEMD3-203ENST00000541171 MCM9Q9NXL9 1143 aa29.1■■■□□ 2.25
LEMD3-203ENST00000541171 OGDHLQ9ULD0 1010 aa29.1■■■□□ 2.25
LEMD3-203ENST00000541171 ZMYND8Q9ULU4 1186 aaPredicted RBP29.1■■■□□ 2.25
LEMD3-203ENST00000541171 RANBP2P49792 3224 aaKnown RBP29.09■■■□□ 2.25
LEMD3-203ENST00000541171 IFIT2P09913 472 aaKnown RBP29.09■■■□□ 2.25
LEMD3-203ENST00000541171 MS4A1P11836 297 aa29.09■■■□□ 2.25
LEMD3-203ENST00000541171 VCAM1P19320 739 aa29.09■■■□□ 2.25
LEMD3-203ENST00000541171 EVX2Q03828 476 aa29.09■■■□□ 2.25
LEMD3-203ENST00000541171 KIF1BPQ96EK5 621 aa29.09■■■□□ 2.25
LEMD3-203ENST00000541171 ZNF532Q9HCE3 1301 aa29.09■■■□□ 2.25
LEMD3-203ENST00000541171 MPHOSPH10O00566 681 aaKnown RBP29.08■■■□□ 2.25
LEMD3-203ENST00000541171 CCNA1P78396 465 aa29.08■■■□□ 2.25
LEMD3-203ENST00000541171 SEPT2Q15019 361 aa29.08■■■□□ 2.25
LEMD3-203ENST00000541171 COG6Q9Y2V7 657 aa29.08■■■□□ 2.25
LEMD3-203ENST00000541171 CCND3P30281 292 aaPredicted RBP29.07■■■□□ 2.24
LEMD3-203ENST00000541171 GUCY1A2P33402 732 aa29.07■■■□□ 2.24
LEMD3-203ENST00000541171 RPAP2Q8IXW5 612 aaPredicted RBP29.07■■■□□ 2.24
LEMD3-203ENST00000541171 EDC3Q96F86 508 aaKnown RBP29.07■■■□□ 2.24
LEMD3-203ENST00000541171 APBA2Q99767 749 aa29.07■■■□□ 2.24
LEMD3-203ENST00000541171 RPAP3Q9H6T3 665 aaPredicted RBP29.07■■■□□ 2.24
LEMD3-203ENST00000541171 ALPK3Q96L96 1907 aa29.06■■■□□ 2.24
LEMD3-203ENST00000541171 HMMRO75330 724 aa29.06■■■□□ 2.24
LEMD3-203ENST00000541171 MAP2K5Q13163 448 aa29.06■■■□□ 2.24
LEMD3-203ENST00000541171 SDR42E1Q8WUS8 393 aa29.06■■■□□ 2.24
LEMD3-203ENST00000541171 GLRX3O76003 335 aaKnown RBP29.05■■■□□ 2.24
LEMD3-203ENST00000541171 GABPAQ06546 454 aa29.05■■■□□ 2.24
LEMD3-203ENST00000541171 SIRT2Q8IXJ6 389 aa29.05■■■□□ 2.24
LEMD3-203ENST00000541171 LCORLQ8N3X6 602 aa29.05■■■□□ 2.24
LEMD3-203ENST00000541171 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.05■■■□□ 2.24
LEMD3-203ENST00000541171 BTBD7Q9P203 1132 aa29.05■■■□□ 2.24
LEMD3-203ENST00000541171 CYP2D6P10635 497 aa29.04■■■□□ 2.24
LEMD3-203ENST00000541171 SYN1P17600 705 aa29.04■■■□□ 2.24
LEMD3-203ENST00000541171 DDX19BQ9UMR2 479 aa29.04■■■□□ 2.24
LEMD3-203ENST00000541171 DDX60LQ5H9U9 1706 aaKnown RBP29.03■■■□□ 2.24
LEMD3-203ENST00000541171 A0A1W2PPC1 479 aa29.03■■■□□ 2.24
LEMD3-203ENST00000541171 TCRBV5S4A2TA0A5A2 114 aa29.03■■■□□ 2.24
LEMD3-203ENST00000541171 ARMT1Q9H993 441 aa29.03■■■□□ 2.24
LEMD3-203ENST00000541171 DCP1AQ9NPI6 582 aaPredicted RBP29.03■■■□□ 2.24
LEMD3-203ENST00000541171 SZT2Q5T011 3432 aa29.03■■■□□ 2.24
LEMD3-203ENST00000541171 SPDYE16A6NNV3 312 aaPredicted RBP29.02■■■□□ 2.24
LEMD3-203ENST00000541171 PTPREP23469 700 aa29.02■■■□□ 2.24
LEMD3-203ENST00000541171 SLFNL1Q499Z3 407 aa29.02■■■□□ 2.24
LEMD3-203ENST00000541171 BOLA2Q9H3K6 86 aa29.02■■■□□ 2.24
LEMD3-203ENST00000541171 ZBTB40Q9NUA8 1239 aa29.02■■■□□ 2.24
LEMD3-203ENST00000541171 FLRT1Q9NZU1 646 aa29.02■■■□□ 2.24
LEMD3-203ENST00000541171 IVNS1ABPQ9Y6Y0 642 aa29.02■■■□□ 2.24
LEMD3-203ENST00000541171 PFASO15067 1338 aa29.01■■■□□ 2.23
LEMD3-203ENST00000541171 A0A1W2PRG0 241 aa29.01■■■□□ 2.23
LEMD3-203ENST00000541171 SLC15A5A6NIM6 579 aa29.01■■■□□ 2.23
LEMD3-203ENST00000541171 SOX1O00570 391 aaPredicted RBP29.01■■■□□ 2.23
LEMD3-203ENST00000541171 RAB11FIP3O75154 756 aa29.01■■■□□ 2.23
LEMD3-203ENST00000541171 LHX8Q68G74 356 aa29.01■■■□□ 2.23
LEMD3-203ENST00000541171 LBX2Q6XYB7 198 aa29.01■■■□□ 2.23
LEMD3-203ENST00000541171 SLC44A5Q8NCS7 719 aa29.01■■■□□ 2.23
LEMD3-203ENST00000541171 GDF15Q99988 308 aa29.01■■■□□ 2.23
LEMD3-203ENST00000541171 NAV1Q8NEY1 1877 aa29.01■■■□□ 2.23
LEMD3-203ENST00000541171 PRKAB2O43741 272 aa29■■■□□ 2.23
LEMD3-203ENST00000541171 MFSD14CQ5VZR4 134 aa29■■■□□ 2.23
LEMD3-203ENST00000541171 DYNLL2Q96FJ2 89 aa29■■■□□ 2.23
LEMD3-203ENST00000541171 LRCH3Q96II8 777 aa29■■■□□ 2.23
LEMD3-203ENST00000541171 PAG1Q9NWQ8 432 aa29■■■□□ 2.23
LEMD3-203ENST00000541171 ATP2B2Q01814 1243 aa28.99■■■□□ 2.23
LEMD3-203ENST00000541171 TANGO6Q9C0B7 1094 aa28.99■■■□□ 2.23
LEMD3-203ENST00000541171 MBD4O95243 580 aa28.98■■■□□ 2.23
LEMD3-203ENST00000541171 CNGA1P29973 690 aa28.97■■■□□ 2.23
LEMD3-203ENST00000541171 ADD2P35612 726 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms