RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 TMEM47Q9BQJ4 181 aa14.26□□□□□ -0.13
AP003559.1-201ENST00000540906 MRIQ9BWK5 157 aa14.26□□□□□ -0.13
AP003559.1-201ENST00000540906 DNAJC18Q9H819 358 aa14.26□□□□□ -0.13
AP003559.1-201ENST00000540906 TCP11L1Q9NUJ3 509 aa14.26□□□□□ -0.13
AP003559.1-201ENST00000540906 CNTNAP5Q8WYK1 1306 aa14.26□□□□□ -0.13
AP003559.1-201ENST00000540906 MYH8P13535 1937 aa14.26□□□□□ -0.13
AP003559.1-201ENST00000540906 DDTLA6NHG4 134 aaPredicted RBP14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 ELP1O95163 1332 aa14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 LIG1P18858 919 aa14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 SHMT1P34896 483 aa14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 PRELPP51888 382 aa14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 HDLBPQ00341 1268 aaKnown RBP14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 DALRD3Q5D0E6 543 aaKnown RBP14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 RSBN1LQ6PCB5 846 aaPredicted RBP14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 DGKHQ86XP1 1220 aa14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 STAG2Q8N3U4 1231 aa14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 NEDD1Q8NHV4 660 aa14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 TDRD3Q9H7E2 651 aaKnown RBP14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 SERPINA10Q9UK55 444 aa14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 VIL1P09327 827 aaKnown RBP14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 PNMA1Q8ND90 353 aa14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 NLGN2Q8NFZ4 835 aa14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 CEP95Q96GE4 821 aa14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 MTMR7Q9Y216 660 aa14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 CLIC4Q9Y696 253 aa14.25□□□□□ -0.13
AP003559.1-201ENST00000540906 GREB1LQ9C091 1923 aaPredicted RBP14.24□□□□□ -0.13
AP003559.1-201ENST00000540906 CCDC196A0A1B0GTZ2 297 aa14.24□□□□□ -0.13
AP003559.1-201ENST00000540906 SHTN1A0MZ66 631 aa14.24□□□□□ -0.13
AP003559.1-201ENST00000540906 SYCE3A1L190 88 aa14.24□□□□□ -0.13
AP003559.1-201ENST00000540906 ZNF445P59923 1031 aa14.24□□□□□ -0.13
AP003559.1-201ENST00000540906 MYSM1Q5VVJ2 828 aa14.24□□□□□ -0.13
AP003559.1-201ENST00000540906 OXER1Q8TDS5 423 aa14.24□□□□□ -0.13
AP003559.1-201ENST00000540906 PIBF1Q8WXW3 757 aa14.24□□□□□ -0.13
AP003559.1-201ENST00000540906 FHDC1Q9C0D6 1143 aaPredicted RBP14.24□□□□□ -0.13
AP003559.1-201ENST00000540906 KAT14Q9H8E8 782 aa14.24□□□□□ -0.13
AP003559.1-201ENST00000540906 V9GY48 417 aaPredicted RBP14.24□□□□□ -0.13
AP003559.1-201ENST00000540906 IGKV6D-41A0A0C4DH26 115 aa14.23□□□□□ -0.13
AP003559.1-201ENST00000540906 ADAMTS3O15072 1205 aa14.23□□□□□ -0.13
AP003559.1-201ENST00000540906 DEXIO95424 95 aa14.23□□□□□ -0.13
AP003559.1-201ENST00000540906 GRM4Q14833 912 aa14.23□□□□□ -0.13
AP003559.1-201ENST00000540906 GRIPAP1Q4V328 841 aa14.23□□□□□ -0.13
AP003559.1-201ENST00000540906 IDI2Q9BXS1 227 aa14.23□□□□□ -0.13
AP003559.1-201ENST00000540906 RNF26Q9BY78 433 aaPredicted RBP14.23□□□□□ -0.13
AP003559.1-201ENST00000540906 SCAND2PQ9GZW5 306 aaPredicted RBP14.23□□□□□ -0.13
AP003559.1-201ENST00000540906 CPVLQ9H3G5 476 aa14.23□□□□□ -0.13
AP003559.1-201ENST00000540906 RBM28Q9NW13 759 aaKnown RBP14.23□□□□□ -0.13
AP003559.1-201ENST00000540906 VPS54Q9P1Q0 977 aa14.23□□□□□ -0.13
AP003559.1-201ENST00000540906 MAD2L2Q9UI95 211 aa14.23□□□□□ -0.13
AP003559.1-201ENST00000540906 RCOR1Q9UKL0 485 aa14.23□□□□□ -0.13
AP003559.1-201ENST00000540906 STX8Q9UNK0 236 aa14.23□□□□□ -0.13
AP003559.1-201ENST00000540906 PLIN4Q96Q06 1357 aa14.23□□□□□ -0.13
AP003559.1-201ENST00000540906 BTBD18B2RXH4 712 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 PRPF3O43395 683 aaKnown RBP14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 CALM1P0DP23 149 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 CALM2P0DP24 149 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 CALM3P0DP25 149 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 NOVP48745 357 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 RASSF7Q02833 373 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 CXCL9Q07325 125 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 TRIM22Q8IYM9 498 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 CTCFLQ8NI51 663 aaPredicted RBP14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 SERPINB13Q9UIV8 391 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 GOLGA6L3A6NEY3 463 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 MMP1P03956 469 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 GOLGA8HP0CJ92 632 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 EIF6P56537 245 aaKnown RBP14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 NR5A1Q13285 461 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 NPY5RQ15761 445 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 NIM1KQ8IY84 436 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 ZNRF3Q9ULT6 936 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 BCS1LQ9Y276 419 aa14.22□□□□□ -0.13
AP003559.1-201ENST00000540906 CLRN2A0PK11 232 aa14.21□□□□□ -0.13
AP003559.1-201ENST00000540906 FAM205CA6NFA0 338 aa14.21□□□□□ -0.13
AP003559.1-201ENST00000540906 CYTH3O43739 400 aa14.21□□□□□ -0.13
AP003559.1-201ENST00000540906 XRCC6P12956 609 aaKnown RBP eCLIP14.21□□□□□ -0.13
AP003559.1-201ENST00000540906 U2AF2P26368 475 aaKnown RBP eCLIP14.21□□□□□ -0.13
AP003559.1-201ENST00000540906 PPP2R5BQ15173 497 aa14.21□□□□□ -0.13
AP003559.1-201ENST00000540906 CSPP1Q1MSJ5 1256 aa14.21□□□□□ -0.13
AP003559.1-201ENST00000540906 NOM1Q5C9Z4 860 aaKnown RBP14.21□□□□□ -0.13
AP003559.1-201ENST00000540906 RGS22Q8NE09 1264 aa14.21□□□□□ -0.13
AP003559.1-201ENST00000540906 ZNF396Q96N95 335 aaPredicted RBP14.21□□□□□ -0.13
AP003559.1-201ENST00000540906 GOLPH3LQ9H4A5 285 aa14.21□□□□□ -0.13
AP003559.1-201ENST00000540906 RTEL1Q9NZ71 1219 aa14.21□□□□□ -0.13
AP003559.1-201ENST00000540906 SPDYE2BA6NHP3 402 aa14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 SPDYE6P0CI01 402 aa14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 EARS2Q5JPH6 523 aaKnown RBP14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 BRAPQ7Z569 592 aa14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 CDAN1Q8IWY9 1227 aa14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 DIS3L2Q8IYB7 885 aaKnown RBP14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 LINC00301Q8NCQ3 95 aa14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 WASF1Q92558 559 aa14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 PANK2Q9BZ23 570 aa14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 TAOK3Q9H2K8 898 aa14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 ZNF287Q9HBT7 754 aa14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 CFAP45Q9UL16 551 aa14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 CD2APQ9Y5K6 639 aa14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 PALM3A6NDB9 673 aaPredicted RBP14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 NT5C2P49902 561 aa14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 JAG1P78504 1218 aa14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 TRIM29Q14134 588 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms