RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 DCP1AQ9NPI6 582 aaPredicted RBP12.99□□□□□ -0.33
LGR5-203ENST00000540815 RBM28Q9NW13 759 aaKnown RBP12.99□□□□□ -0.33
LGR5-203ENST00000540815 ZNF446Q9NWS9 450 aa12.99□□□□□ -0.33
LGR5-203ENST00000540815 AATFQ9NY61 560 aaKnown RBP eCLIP12.99□□□□□ -0.33
LGR5-203ENST00000540815 TOB1P50616 345 aaPredicted RBP12.99□□□□□ -0.33
LGR5-203ENST00000540815 DPCR1Q3MIW9 517 aa12.99□□□□□ -0.33
LGR5-203ENST00000540815 SBK1Q52WX2 424 aa12.99□□□□□ -0.33
LGR5-203ENST00000540815 CCDC82Q8N4S0 544 aa12.99□□□□□ -0.33
LGR5-203ENST00000540815 ARPP21Q9UBL0 812 aaPredicted RBP12.99□□□□□ -0.33
LGR5-203ENST00000540815 PRDM1O75626 825 aa12.98□□□□□ -0.33
LGR5-203ENST00000540815 DDAH1O94760 285 aa12.98□□□□□ -0.33
LGR5-203ENST00000540815 GRAPQ13588 217 aa12.98□□□□□ -0.33
LGR5-203ENST00000540815 KRI1Q8N9T8 703 aaKnown RBP12.98□□□□□ -0.33
LGR5-203ENST00000540815 GRAPLQ8TC17 118 aaPredicted RBP12.98□□□□□ -0.33
LGR5-203ENST00000540815 CLIC6Q96NY7 704 aa12.98□□□□□ -0.33
LGR5-203ENST00000540815 TUBE1Q9UJT0 475 aa12.98□□□□□ -0.33
LGR5-203ENST00000540815 LEMD3Q9Y2U8 911 aa12.98□□□□□ -0.33
LGR5-203ENST00000540815 EP400Q96L91 3159 aa12.98□□□□□ -0.33
LGR5-203ENST00000540815 PRPF3O43395 683 aaKnown RBP12.98□□□□□ -0.33
LGR5-203ENST00000540815 AKAP17AQ02040 695 aaKnown RBP12.98□□□□□ -0.33
LGR5-203ENST00000540815 FUT2Q10981 343 aa12.98□□□□□ -0.33
LGR5-203ENST00000540815 ZCCHC17Q9NP64 241 aaKnown RBP12.98□□□□□ -0.33
LGR5-203ENST00000540815 SMTNL1A8MU46 457 aa12.98□□□□□ -0.33
LGR5-203ENST00000540815 ONECUT3O60422 494 aaPredicted RBP12.98□□□□□ -0.33
LGR5-203ENST00000540815 XBP1P17861 261 aa12.98□□□□□ -0.33
LGR5-203ENST00000540815 GYS2P54840 703 aa12.98□□□□□ -0.33
LGR5-203ENST00000540815 CEP135Q66GS9 1140 aa12.98□□□□□ -0.33
LGR5-203ENST00000540815 ELOA2Q8IYF1 753 aaPredicted RBP12.98□□□□□ -0.33
LGR5-203ENST00000540815 UBR3Q6ZT12 1888 aa12.97□□□□□ -0.33
LGR5-203ENST00000540815 AFF2P51816 1311 aa12.97□□□□□ -0.33
LGR5-203ENST00000540815 ADRA2BP18089 450 aa12.97□□□□□ -0.33
LGR5-203ENST00000540815 TROAPQ12815 778 aa12.97□□□□□ -0.33
LGR5-203ENST00000540815 PKN1Q16512 942 aa12.97□□□□□ -0.33
LGR5-203ENST00000540815 CCDC66A2RUB6 948 aa12.97□□□□□ -0.33
LGR5-203ENST00000540815 CYP2D6P10635 497 aa12.97□□□□□ -0.33
LGR5-203ENST00000540815 PTPREP23469 700 aa12.97□□□□□ -0.33
LGR5-203ENST00000540815 NR5A1Q13285 461 aa12.97□□□□□ -0.33
LGR5-203ENST00000540815 DZIP1Q86YF9 867 aaKnown RBP12.97□□□□□ -0.33
LGR5-203ENST00000540815 CNBD1Q8NA66 436 aa12.97□□□□□ -0.33
LGR5-203ENST00000540815 FBXO2Q9UK22 296 aaPredicted RBP12.97□□□□□ -0.33
LGR5-203ENST00000540815 KCNH3Q9ULD8 1083 aa12.97□□□□□ -0.33
LGR5-203ENST00000540815 CEP131Q9UPN4 1083 aa12.97□□□□□ -0.33
LGR5-203ENST00000540815 ERCC6LQ2NKX8 1250 aa12.96□□□□□ -0.33
LGR5-203ENST00000540815 KRBA2Q6ZNG9 492 aa12.96□□□□□ -0.33
LGR5-203ENST00000540815 WDR66Q8TBY9 1149 aa12.96□□□□□ -0.33
LGR5-203ENST00000540815 OXER1Q8TDS5 423 aa12.96□□□□□ -0.33
LGR5-203ENST00000540815 PHF20Q9BVI0 1012 aa12.96□□□□□ -0.33
LGR5-203ENST00000540815 ANKIB1Q9P2G1 1089 aa12.96□□□□□ -0.33
LGR5-203ENST00000540815 XDHP47989 1333 aa12.96□□□□□ -0.33
LGR5-203ENST00000540815 BIN1O00499 593 aa12.96□□□□□ -0.34
LGR5-203ENST00000540815 TRIM66O15016 1216 aa12.96□□□□□ -0.34
LGR5-203ENST00000540815 PLEKHA8P1O95397 391 aa12.96□□□□□ -0.34
LGR5-203ENST00000540815 NT5C2P49902 561 aa12.96□□□□□ -0.34
LGR5-203ENST00000540815 GRIK5Q16478 980 aa12.96□□□□□ -0.34
LGR5-203ENST00000540815 C15orf52Q6ZUT6 534 aaKnown RBP12.96□□□□□ -0.34
LGR5-203ENST00000540815 TMTC3Q6ZXV5 915 aa12.96□□□□□ -0.34
LGR5-203ENST00000540815 FILIP1Q7Z7B0 1213 aa12.96□□□□□ -0.34
LGR5-203ENST00000540815 SEPT12Q8IYM1 358 aa12.96□□□□□ -0.34
LGR5-203ENST00000540815 ZNF579Q8NAF0 562 aaKnown RBP12.96□□□□□ -0.34
LGR5-203ENST00000540815 GPR101Q96P66 508 aaPredicted RBP12.96□□□□□ -0.34
LGR5-203ENST00000540815 NEMFO60524 1076 aa12.95□□□□□ -0.34
LGR5-203ENST00000540815 TPM4P67936 248 aa12.95□□□□□ -0.34
LGR5-203ENST00000540815 PDE4BQ07343 736 aa12.95□□□□□ -0.34
LGR5-203ENST00000540815 PRR5LQ6MZQ0 368 aa12.95□□□□□ -0.34
LGR5-203ENST00000540815 EPC1Q9H2F5 836 aa12.95□□□□□ -0.34
LGR5-203ENST00000540815 PCDHB6Q9Y5E3 794 aa12.95□□□□□ -0.34
LGR5-203ENST00000540815 IKBKBO14920 756 aa12.95□□□□□ -0.34
LGR5-203ENST00000540815 NMT2O60551 498 aa12.95□□□□□ -0.34
LGR5-203ENST00000540815 KRT2P35908 639 aa12.95□□□□□ -0.34
LGR5-203ENST00000540815 VPS54Q9P1Q0 977 aa12.95□□□□□ -0.34
LGR5-203ENST00000540815 NAV1Q8NEY1 1877 aa12.95□□□□□ -0.34
LGR5-203ENST00000540815 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.94□□□□□ -0.34
LGR5-203ENST00000540815 LDHBP07195 334 aaKnown RBP12.94□□□□□ -0.34
LGR5-203ENST00000540815 NCAPHQ15003 741 aa12.94□□□□□ -0.34
LGR5-203ENST00000540815 LONRF3Q496Y0 759 aa12.94□□□□□ -0.34
LGR5-203ENST00000540815 MEX3CQ5U5Q3 659 aaKnown RBP12.94□□□□□ -0.34
LGR5-203ENST00000540815 ZNF804AQ7Z570 1209 aa12.94□□□□□ -0.34
LGR5-203ENST00000540815 METTL16Q86W50 562 aaKnown RBP12.94□□□□□ -0.34
LGR5-203ENST00000540815 CNNM3Q8NE01 707 aa12.94□□□□□ -0.34
LGR5-203ENST00000540815 NOL10Q9BSC4 688 aaKnown RBP12.94□□□□□ -0.34
LGR5-203ENST00000540815 CABP5Q9NP86 173 aa12.94□□□□□ -0.34
LGR5-203ENST00000540815 FEZ2Q9UHY8 353 aaPredicted RBP12.94□□□□□ -0.34
LGR5-203ENST00000540815 SRPRBQ9Y5M8 271 aaKnown RBP12.94□□□□□ -0.34
LGR5-203ENST00000540815 V9GY48 417 aaPredicted RBP12.94□□□□□ -0.34
LGR5-203ENST00000540815 CNTNAP5Q8WYK1 1306 aa12.94□□□□□ -0.34
LGR5-203ENST00000540815 GSTO1P78417 241 aa12.94□□□□□ -0.34
LGR5-203ENST00000540815 RAD51AP2Q09MP3 1159 aa12.94□□□□□ -0.34
LGR5-203ENST00000540815 PNOCQ13519 176 aa12.94□□□□□ -0.34
LGR5-203ENST00000540815 LRRC8AQ8IWT6 810 aa12.94□□□□□ -0.34
LGR5-203ENST00000540815 CTCFLQ8NI51 663 aaPredicted RBP12.94□□□□□ -0.34
LGR5-203ENST00000540815 CERKQ8TCT0 537 aa12.94□□□□□ -0.34
LGR5-203ENST00000540815 MKRN1Q9UHC7 482 aaKnown RBP12.94□□□□□ -0.34
LGR5-203ENST00000540815 LCMT1Q9UIC8 334 aa12.94□□□□□ -0.34
LGR5-203ENST00000540815 hCG_1642624A0A1W2PR95 340 aa12.94□□□□□ -0.34
LGR5-203ENST00000540815 FAM47AQ5JRC9 791 aa12.94□□□□□ -0.34
LGR5-203ENST00000540815 MCM9Q9NXL9 1143 aa12.94□□□□□ -0.34
LGR5-203ENST00000540815 HOOK1Q9UJC3 728 aaKnown RBP12.94□□□□□ -0.34
LGR5-203ENST00000540815 ROBO3Q96MS0 1386 aa12.93□□□□□ -0.34
LGR5-203ENST00000540815 GYS1P13807 737 aa12.93□□□□□ -0.34
LGR5-203ENST00000540815 HSPA1LP34931 641 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms