RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 JAK2O60674 1132 aa16.65■□□□□ 0.26
CYB561A3-216ENST00000540755 CELF2O95319 508 aaKnown RBP16.65■□□□□ 0.26
CYB561A3-216ENST00000540755 HSPA8P11142 646 aaKnown RBP16.65■□□□□ 0.26
CYB561A3-216ENST00000540755 TFAP4Q01664 338 aa16.65■□□□□ 0.26
CYB561A3-216ENST00000540755 IFIT1BQ5T764 474 aaKnown RBP16.65■□□□□ 0.26
CYB561A3-216ENST00000540755 SAMD7Q7Z3H4 446 aa16.65■□□□□ 0.26
CYB561A3-216ENST00000540755 SAPCD2Q86UD0 394 aa16.65■□□□□ 0.26
CYB561A3-216ENST00000540755 SLC44A5Q8NCS7 719 aa16.65■□□□□ 0.26
CYB561A3-216ENST00000540755 TMOD2Q9NZR1 351 aa16.65■□□□□ 0.26
CYB561A3-216ENST00000540755 SERPINB13Q9UIV8 391 aa16.65■□□□□ 0.26
CYB561A3-216ENST00000540755 ATRNL1Q5VV63 1379 aa16.65■□□□□ 0.26
CYB561A3-216ENST00000540755 GREB1LQ9C091 1923 aaPredicted RBP16.64■□□□□ 0.25
CYB561A3-216ENST00000540755 PLIN4Q96Q06 1357 aa16.64■□□□□ 0.25
CYB561A3-216ENST00000540755 GOLGA8AA7E2F4 631 aa16.64■□□□□ 0.25
CYB561A3-216ENST00000540755 TSPY3P0CV98 308 aa16.64■□□□□ 0.25
CYB561A3-216ENST00000540755 TSPY8P0CW00 308 aa16.64■□□□□ 0.25
CYB561A3-216ENST00000540755 DLK2Q6UY11 383 aa16.64■□□□□ 0.25
CYB561A3-216ENST00000540755 MICU3Q86XE3 530 aa16.64■□□□□ 0.25
CYB561A3-216ENST00000540755 DGKHQ86XP1 1220 aa16.64■□□□□ 0.25
CYB561A3-216ENST00000540755 ZNF654Q8IZM8 581 aa16.64■□□□□ 0.25
CYB561A3-216ENST00000540755 ANKS1AQ92625 1134 aa16.64■□□□□ 0.25
CYB561A3-216ENST00000540755 ZBED3Q96IU2 234 aaPredicted RBP16.64■□□□□ 0.25
CYB561A3-216ENST00000540755 KIF3AQ9Y496 699 aa16.64■□□□□ 0.25
CYB561A3-216ENST00000540755 H7C1D1 291 aa16.63■□□□□ 0.25
CYB561A3-216ENST00000540755 CPLX1O14810 134 aa16.63■□□□□ 0.25
CYB561A3-216ENST00000540755 CDKL5O76039 1030 aa16.63■□□□□ 0.25
CYB561A3-216ENST00000540755 LBX1P52954 281 aa16.63■□□□□ 0.25
CYB561A3-216ENST00000540755 CACNB3P54284 484 aa16.63■□□□□ 0.25
CYB561A3-216ENST00000540755 ZNF280AP59817 542 aaPredicted RBP16.63■□□□□ 0.25
CYB561A3-216ENST00000540755 PPP2R5BQ15173 497 aa16.63■□□□□ 0.25
CYB561A3-216ENST00000540755 SPDYE2Q495Y8 402 aa16.63■□□□□ 0.25
CYB561A3-216ENST00000540755 LARP1BQ659C4 914 aaKnown RBP16.63■□□□□ 0.25
CYB561A3-216ENST00000540755 CPLX2Q6PUV4 134 aaKnown RBP16.63■□□□□ 0.25
CYB561A3-216ENST00000540755 NEDD1Q8NHV4 660 aa16.63■□□□□ 0.25
CYB561A3-216ENST00000540755 GBP4Q96PP9 640 aa16.63■□□□□ 0.25
CYB561A3-216ENST00000540755 ZNF70Q9UC06 446 aaPredicted RBP16.63■□□□□ 0.25
CYB561A3-216ENST00000540755 DDAH1O94760 285 aa16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 CALM1P0DP23 149 aa16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 CALM2P0DP24 149 aa16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 CALM3P0DP25 149 aa16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 ZSCAN22P10073 491 aaPredicted RBP16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 ECE1P42892 770 aa16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 MAP2K1Q02750 393 aaPredicted RBP16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 TBC1D10BQ4KMP7 808 aaPredicted RBP16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 FKBP1CQ5VVH2 108 aa16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 PAXIP1Q6ZW49 1069 aaPredicted RBP16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 CDC37L1Q7L3B6 337 aa16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 CATIPQ7Z7H3 387 aa16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 RAB11FIP4Q86YS3 637 aa16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 ZFPM1Q8IX07 1006 aa16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 FAM184AQ8NB25 1140 aa16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 MYL10Q9BUA6 226 aa16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 IL17RBQ9NRM6 502 aa16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 FAM217BQ9NTX9 383 aaPredicted RBP16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 PI4KBQ9UBF8 816 aa16.62■□□□□ 0.25
CYB561A3-216ENST00000540755 CCDC196A0A1B0GTZ2 297 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 DDTLA6NHG4 134 aaPredicted RBP16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 AOC2O75106 756 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 RXRAP19793 462 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 CDC27P30260 824 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 TCP10Q12799 353 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 GRM1Q13255 1194 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 RCSD1Q6JBY9 416 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 SH3BP5LQ7L8J4 393 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 DDX11Q96FC9 970 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 MYOZ2Q9NPC6 264 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 MTMR6Q9Y217 621 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 MYH6P13533 1939 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 POLR2AP24928 1970 aaKnown RBP16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 MYO1BO43795 1136 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 NMT2O60551 498 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 DTNBO60941 627 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 ADD1P35611 737 aaKnown RBP16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 TROAPQ12815 778 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 NTRK3Q16288 839 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 RTN1Q16799 776 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 USP48Q86UV5 1035 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 METTL16Q86W50 562 aaKnown RBP16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 FOXP4Q8IVH2 680 aaPredicted RBP16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 RGS22Q8NE09 1264 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 HHIPL1Q96JK4 782 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 ZNF408Q9H9D4 720 aa16.61■□□□□ 0.25
CYB561A3-216ENST00000540755 ASTN2O75129 1339 aaPredicted RBP16.6■□□□□ 0.25
CYB561A3-216ENST00000540755 WNT10BO00744 389 aa16.6■□□□□ 0.25
CYB561A3-216ENST00000540755 F13A1P00488 732 aa16.6■□□□□ 0.25
CYB561A3-216ENST00000540755 FDPSP14324 419 aaKnown RBP16.6■□□□□ 0.25
CYB561A3-216ENST00000540755 MCM4P33991 863 aa16.6■□□□□ 0.25
CYB561A3-216ENST00000540755 SHMT1P34896 483 aa16.6■□□□□ 0.25
CYB561A3-216ENST00000540755 NOVP48745 357 aa16.6■□□□□ 0.25
CYB561A3-216ENST00000540755 FANCBQ8NB91 859 aa16.6■□□□□ 0.25
CYB561A3-216ENST00000540755 NUP133Q8WUM0 1156 aa16.6■□□□□ 0.25
CYB561A3-216ENST00000540755 FAM151AQ8WW52 585 aa16.6■□□□□ 0.25
CYB561A3-216ENST00000540755 RBM28Q9NW13 759 aaKnown RBP16.6■□□□□ 0.25
CYB561A3-216ENST00000540755 STK36Q9NRP7 1315 aa16.59■□□□□ 0.25
CYB561A3-216ENST00000540755 CLRN2A0PK11 232 aa16.59■□□□□ 0.25
CYB561A3-216ENST00000540755 ADM5C9JUS6 153 aa16.59■□□□□ 0.25
CYB561A3-216ENST00000540755 BAG4O95429 457 aaKnown RBP16.59■□□□□ 0.25
CYB561A3-216ENST00000540755 IFNAR1P17181 557 aa16.59■□□□□ 0.25
CYB561A3-216ENST00000540755 KIF4BQ2VIQ3 1234 aa16.59■□□□□ 0.25
CYB561A3-216ENST00000540755 KRT26Q7Z3Y9 468 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms