RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 DYNLL1P63167 89 aaKnown RBP8.96□□□□□ -0.98
YBX3-209ENST00000540747 G3BP1Q13283 466 aaKnown RBP eCLIP8.96□□□□□ -0.98
YBX3-209ENST00000540747 GRB14Q14449 540 aa8.96□□□□□ -0.98
YBX3-209ENST00000540747 ATF7IPQ6VMQ6 1270 aa8.96□□□□□ -0.98
YBX3-209ENST00000540747 CATSPERGQ6ZRH7 1159 aa8.96□□□□□ -0.98
YBX3-209ENST00000540747 TRPV1Q8NER1 839 aa8.96□□□□□ -0.98
YBX3-209ENST00000540747 NOL10Q9BSC4 688 aaKnown RBP8.96□□□□□ -0.98
YBX3-209ENST00000540747 PAGR1Q9BTK6 254 aa8.96□□□□□ -0.98
YBX3-209ENST00000540747 KIAA1683Q9H0B3 1180 aa8.96□□□□□ -0.98
YBX3-209ENST00000540747 BTBD7Q9P203 1132 aa8.96□□□□□ -0.98
YBX3-209ENST00000540747 SAP30BPQ9UHR5 308 aaKnown RBP8.96□□□□□ -0.98
YBX3-209ENST00000540747 DBNLQ9UJU6 430 aaKnown RBP8.96□□□□□ -0.98
YBX3-209ENST00000540747 NOP58Q9Y2X3 529 aaKnown RBP8.96□□□□□ -0.98
YBX3-209ENST00000540747 MUC3AQ02505 3323 aa8.96□□□□□ -0.98
YBX3-209ENST00000540747 A0A0G2JMZ2 1700 aa8.95□□□□□ -0.98
YBX3-209ENST00000540747 SPDYE16A6NNV3 312 aaPredicted RBP8.95□□□□□ -0.98
YBX3-209ENST00000540747 USP17L15C9J2P7 530 aa8.95□□□□□ -0.98
YBX3-209ENST00000540747 USP17L13C9JLJ4 530 aa8.95□□□□□ -0.98
YBX3-209ENST00000540747 USP17L11C9JVI0 530 aa8.95□□□□□ -0.98
YBX3-209ENST00000540747 USP17L18D6R9N7 530 aa8.95□□□□□ -0.98
YBX3-209ENST00000540747 USP17L22D6RA61 530 aa8.95□□□□□ -0.98
YBX3-209ENST00000540747 USP17L17D6RBQ6 530 aa8.95□□□□□ -0.98
YBX3-209ENST00000540747 USP17L19D6RCP7 530 aa8.95□□□□□ -0.98
YBX3-209ENST00000540747 USP17L20D6RJB6 530 aa8.95□□□□□ -0.98
YBX3-209ENST00000540747 CYBAP13498 195 aa8.95□□□□□ -0.98
YBX3-209ENST00000540747 VCAM1P19320 739 aa8.95□□□□□ -0.98
YBX3-209ENST00000540747 SHMT1P34896 483 aa8.95□□□□□ -0.98
YBX3-209ENST00000540747 MDM2Q00987 491 aaPredicted RBP8.95□□□□□ -0.98
YBX3-209ENST00000540747 USP17L24Q0WX57 530 aa8.95□□□□□ -0.98
YBX3-209ENST00000540747 TTC39AQ5SRH9 613 aa8.95□□□□□ -0.98
YBX3-209ENST00000540747 CRACR2BQ8N4Y2 399 aaPredicted RBP8.95□□□□□ -0.98
YBX3-209ENST00000540747 NPLOC4Q8TAT6 608 aa8.95□□□□□ -0.98
YBX3-209ENST00000540747 ACER1Q8TDN7 264 aa8.95□□□□□ -0.98
YBX3-209ENST00000540747 EDC3Q96F86 508 aaKnown RBP8.95□□□□□ -0.98
YBX3-209ENST00000540747 COL25A1Q9BXS0 654 aaPredicted RBP8.95□□□□□ -0.98
YBX3-209ENST00000540747 TLR7Q9NYK1 1049 aaKnown RBP8.95□□□□□ -0.98
YBX3-209ENST00000540747 DDX20Q9UHI6 824 aaKnown RBP8.95□□□□□ -0.98
YBX3-209ENST00000540747 RLFQ13129 1914 aa8.94□□□□□ -0.98
YBX3-209ENST00000540747 DNM1LO00429 736 aa8.94□□□□□ -0.98
YBX3-209ENST00000540747 MSCO60682 206 aa8.94□□□□□ -0.98
YBX3-209ENST00000540747 HLA-DOAP06340 250 aa8.94□□□□□ -0.98
YBX3-209ENST00000540747 CCNA1P78396 465 aa8.94□□□□□ -0.98
YBX3-209ENST00000540747 ATP8B2P98198 1209 aa8.94□□□□□ -0.98
YBX3-209ENST00000540747 GABPAQ06546 454 aa8.94□□□□□ -0.98
YBX3-209ENST00000540747 SNX17Q15036 470 aa8.94□□□□□ -0.98
YBX3-209ENST00000540747 CCDC158Q5M9N0 1113 aa8.94□□□□□ -0.98
YBX3-209ENST00000540747 MFSD14CQ5VZR4 134 aa8.94□□□□□ -0.98
YBX3-209ENST00000540747 TMED8Q6PL24 325 aaPredicted RBP8.94□□□□□ -0.98
YBX3-209ENST00000540747 LPAR1Q92633 364 aa8.94□□□□□ -0.98
YBX3-209ENST00000540747 RIOK1Q9BRS2 568 aaKnown RBP8.94□□□□□ -0.98
YBX3-209ENST00000540747 SERPINB13Q9UIV8 391 aa8.94□□□□□ -0.98
YBX3-209ENST00000540747 CHD9Q3L8U1 2897 aa8.94□□□□□ -0.98
YBX3-209ENST00000540747 MYH1P12882 1939 aa8.93□□□□□ -0.98
YBX3-209ENST00000540747 IPO8O15397 1037 aaKnown RBP8.93□□□□□ -0.98
YBX3-209ENST00000540747 BCAR3O75815 825 aa8.93□□□□□ -0.98
YBX3-209ENST00000540747 GLRX3O76003 335 aaKnown RBP8.93□□□□□ -0.98
YBX3-209ENST00000540747 CYP7A1P22680 504 aa8.93□□□□□ -0.98
YBX3-209ENST00000540747 CYP2C19P33261 490 aa8.93□□□□□ -0.98
YBX3-209ENST00000540747 USP14P54578 494 aa8.93□□□□□ -0.98
YBX3-209ENST00000540747 RTP1P59025 263 aa8.93□□□□□ -0.98
YBX3-209ENST00000540747 OLFML2BQ68BL8 750 aa8.93□□□□□ -0.98
YBX3-209ENST00000540747 CERS3Q8IU89 383 aa8.93□□□□□ -0.98
YBX3-209ENST00000540747 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.93□□□□□ -0.98
YBX3-209ENST00000540747 TMEM57Q8N5G2 664 aa8.93□□□□□ -0.98
YBX3-209ENST00000540747 EAF2Q96CJ1 260 aaPredicted RBP8.93□□□□□ -0.98
YBX3-209ENST00000540747 NDUFB9Q9Y6M9 179 aa8.93□□□□□ -0.98
YBX3-209ENST00000540747 A0A1W2PRG0 241 aa8.92□□□□□ -0.98
YBX3-209ENST00000540747 CENPBP07199 599 aaPredicted RBP8.92□□□□□ -0.98
YBX3-209ENST00000540747 PLCD1P51178 756 aa8.92□□□□□ -0.98
YBX3-209ENST00000540747 EVX2Q03828 476 aa8.92□□□□□ -0.98
YBX3-209ENST00000540747 ZYXQ15942 572 aaKnown RBP8.92□□□□□ -0.98
YBX3-209ENST00000540747 ABCB5Q2M3G0 1257 aa8.92□□□□□ -0.98
YBX3-209ENST00000540747 C1orf53Q5VUE5 145 aa8.92□□□□□ -0.98
YBX3-209ENST00000540747 MIGA1Q8NAN2 632 aa8.92□□□□□ -0.98
YBX3-209ENST00000540747 SHCBP1Q8NEM2 672 aa8.92□□□□□ -0.98
YBX3-209ENST00000540747 CLUAP1Q96AJ1 413 aa8.92□□□□□ -0.98
YBX3-209ENST00000540747 FEZ1Q99689 392 aa8.92□□□□□ -0.98
YBX3-209ENST00000540747 MOV10L1Q9BXT6 1211 aaKnown RBP8.92□□□□□ -0.98
YBX3-209ENST00000540747 TRIM34Q9BYJ4 488 aa8.92□□□□□ -0.98
YBX3-209ENST00000540747 SENP6Q9GZR1 1112 aaPredicted RBP8.92□□□□□ -0.98
YBX3-209ENST00000540747 RPAP3Q9H6T3 665 aaPredicted RBP8.92□□□□□ -0.98
YBX3-209ENST00000540747 ANTXR1Q9H6X2 564 aa8.92□□□□□ -0.98
YBX3-209ENST00000540747 ROBO3Q96MS0 1386 aa8.91□□□□□ -0.98
YBX3-209ENST00000540747 COBLO75128 1261 aa8.91□□□□□ -0.98
YBX3-209ENST00000540747 SURF6O75683 361 aaKnown RBP8.91□□□□□ -0.98
YBX3-209ENST00000540747 IDH1O75874 414 aaKnown RBP8.91□□□□□ -0.98
YBX3-209ENST00000540747 ADORA2AP29274 412 aa8.91□□□□□ -0.98
YBX3-209ENST00000540747 ATN1P54259 1190 aaPredicted RBP8.91□□□□□ -0.98
YBX3-209ENST00000540747 ATP2B2Q01814 1243 aa8.91□□□□□ -0.98
YBX3-209ENST00000540747 SEPT2Q15019 361 aa8.91□□□□□ -0.98
YBX3-209ENST00000540747 RAB3GAP1Q15042 981 aa8.91□□□□□ -0.98
YBX3-209ENST00000540747 CERKLQ49MI3 558 aaPredicted RBP8.91□□□□□ -0.98
YBX3-209ENST00000540747 KIAA1755Q5JYT7 1200 aa8.91□□□□□ -0.98
YBX3-209ENST00000540747 C9orf50Q5SZB4 431 aa8.91□□□□□ -0.98
YBX3-209ENST00000540747 TTC6Q86TZ1 520 aa8.91□□□□□ -0.98
YBX3-209ENST00000540747 SIAH1Q8IUQ4 282 aa8.91□□□□□ -0.98
YBX3-209ENST00000540747 CCAR1Q8IX12 1150 aaKnown RBP8.91□□□□□ -0.98
YBX3-209ENST00000540747 MAGEB6Q8N7X4 407 aa8.91□□□□□ -0.98
YBX3-209ENST00000540747 PDLIM7Q9NR12 457 aa8.91□□□□□ -0.98
YBX3-209ENST00000540747 SEPT4O43236 478 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms