RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 RBM28Q9NW13 759 aaKnown RBP11.09□□□□□ -0.63
PAAF1-209ENST00000540659 ZNF541Q9H0D2 1346 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 STK36Q9NRP7 1315 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 KIF28PB7ZC32 967 aa11.08□□□□□ -0.64
PAAF1-209ENST00000540659 HLA-DOAP06340 250 aa11.08□□□□□ -0.64
PAAF1-209ENST00000540659 GUCY1A2P33402 732 aa11.08□□□□□ -0.64
PAAF1-209ENST00000540659 HDLBPQ00341 1268 aaKnown RBP11.08□□□□□ -0.64
PAAF1-209ENST00000540659 AKAP17AQ02040 695 aaKnown RBP11.08□□□□□ -0.64
PAAF1-209ENST00000540659 KRT40Q6A162 431 aa11.08□□□□□ -0.64
PAAF1-209ENST00000540659 RSBN1LQ6PCB5 846 aaPredicted RBP11.08□□□□□ -0.64
PAAF1-209ENST00000540659 NBPF11Q86T75 865 aa11.08□□□□□ -0.64
PAAF1-209ENST00000540659 ZFPM1Q8IX07 1006 aa11.08□□□□□ -0.64
PAAF1-209ENST00000540659 CRACR2BQ8N4Y2 399 aaPredicted RBP11.08□□□□□ -0.64
PAAF1-209ENST00000540659 FBXO18Q8NFZ0 1043 aa11.08□□□□□ -0.64
PAAF1-209ENST00000540659 CTCFLQ8NI51 663 aaPredicted RBP11.08□□□□□ -0.64
PAAF1-209ENST00000540659 JDP2Q8WYK2 163 aa11.08□□□□□ -0.64
PAAF1-209ENST00000540659 WASF1Q92558 559 aa11.08□□□□□ -0.64
PAAF1-209ENST00000540659 TDRD3Q9H7E2 651 aaKnown RBP11.08□□□□□ -0.64
PAAF1-209ENST00000540659 NMRK2Q9NPI5 230 aa11.08□□□□□ -0.64
PAAF1-209ENST00000540659 SERPINA10Q9UK55 444 aa11.08□□□□□ -0.64
PAAF1-209ENST00000540659 STX8Q9UNK0 236 aa11.08□□□□□ -0.64
PAAF1-209ENST00000540659 ZBTB12Q9Y330 459 aaPredicted RBP11.08□□□□□ -0.64
PAAF1-209ENST00000540659 hCG_1642624A0A1W2PR95 340 aa11.07□□□□□ -0.64
PAAF1-209ENST00000540659 GLTPD2A6NH11 291 aa11.07□□□□□ -0.64
PAAF1-209ENST00000540659 DEXIO95424 95 aa11.07□□□□□ -0.64
PAAF1-209ENST00000540659 SLURP2P0DP57 97 aa11.07□□□□□ -0.64
PAAF1-209ENST00000540659 RCAN1P53805 252 aa11.07□□□□□ -0.64
PAAF1-209ENST00000540659 UBE2HP62256 183 aa11.07□□□□□ -0.64
PAAF1-209ENST00000540659 TROAPQ12815 778 aa11.07□□□□□ -0.64
PAAF1-209ENST00000540659 CCDC178Q5BJE1 867 aa11.07□□□□□ -0.64
PAAF1-209ENST00000540659 RCSD1Q6JBY9 416 aa11.07□□□□□ -0.64
PAAF1-209ENST00000540659 ZSCAN29Q8IWY8 852 aaPredicted RBP11.07□□□□□ -0.64
PAAF1-209ENST00000540659 PNMA1Q8ND90 353 aa11.07□□□□□ -0.64
PAAF1-209ENST00000540659 PIBF1Q8WXW3 757 aa11.07□□□□□ -0.64
PAAF1-209ENST00000540659 ZNF396Q96N95 335 aaPredicted RBP11.07□□□□□ -0.64
PAAF1-209ENST00000540659 FTOQ9C0B1 505 aaKnown RBP eCLIP11.07□□□□□ -0.64
PAAF1-209ENST00000540659 TMEM63CQ9P1W3 806 aa11.07□□□□□ -0.64
PAAF1-209ENST00000540659 HDAC9Q9UKV0 1011 aa11.07□□□□□ -0.64
PAAF1-209ENST00000540659 MYH4Q9Y623 1939 aa11.07□□□□□ -0.64
PAAF1-209ENST00000540659 GOLGA6L3A6NEY3 463 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 FZD9O00144 591 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 MPHOSPH10O00566 681 aaKnown RBP11.06□□□□□ -0.64
PAAF1-209ENST00000540659 KIF3CO14782 793 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 AKR1B1P15121 316 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 KIF23Q02241 960 aaPredicted RBP11.06□□□□□ -0.64
PAAF1-209ENST00000540659 PPP2R5BQ15173 497 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 ZSCAN23Q3MJ62 389 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 TMTC3Q6ZXV5 915 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 DGKHQ86XP1 1220 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 NEDD1Q8NHV4 660 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 LEO1Q8WVC0 666 aaPredicted RBP11.06□□□□□ -0.64
PAAF1-209ENST00000540659 USP28Q96RU2 1077 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 TMEM47Q9BQJ4 181 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 TRIM34Q9BYJ4 488 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 SCAND2PQ9GZW5 306 aaPredicted RBP11.06□□□□□ -0.64
PAAF1-209ENST00000540659 TCP11L1Q9NUJ3 509 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 FAM198AQ9UFP1 575 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 CFAP45Q9UL16 551 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 ZNRF3Q9ULT6 936 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 KCNJ14Q9UNX9 436 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 SCN4AP35499 1836 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 CNTNAP5Q8WYK1 1306 aa11.06□□□□□ -0.64
PAAF1-209ENST00000540659 CLRN2A0PK11 232 aa11.05□□□□□ -0.64
PAAF1-209ENST00000540659 GOLGA6L4A6NEF3 574 aa11.05□□□□□ -0.64
PAAF1-209ENST00000540659 DDTLA6NHG4 134 aaPredicted RBP11.05□□□□□ -0.64
PAAF1-209ENST00000540659 FAM196BA6NMK8 535 aa11.05□□□□□ -0.64
PAAF1-209ENST00000540659 TCP10L2B9ZVM9 353 aa11.05□□□□□ -0.64
PAAF1-209ENST00000540659 VIL1P09327 827 aaKnown RBP11.05□□□□□ -0.64
PAAF1-209ENST00000540659 EIF6P56537 245 aaKnown RBP11.05□□□□□ -0.64
PAAF1-209ENST00000540659 RASGRP2Q7LDG7 609 aa11.05□□□□□ -0.64
PAAF1-209ENST00000540659 OGFOD1Q8N543 542 aa11.05□□□□□ -0.64
PAAF1-209ENST00000540659 SRBD1Q8N5C6 995 aaKnown RBP11.05□□□□□ -0.64
PAAF1-209ENST00000540659 PRMT6Q96LA8 375 aaPredicted RBP11.05□□□□□ -0.64
PAAF1-209ENST00000540659 RNF26Q9BY78 433 aaPredicted RBP11.05□□□□□ -0.64
PAAF1-209ENST00000540659 SWAP70Q9UH65 585 aa11.05□□□□□ -0.64
PAAF1-209ENST00000540659 SERPINB13Q9UIV8 391 aa11.05□□□□□ -0.64
PAAF1-209ENST00000540659 V9GY48 417 aaPredicted RBP11.05□□□□□ -0.64
PAAF1-209ENST00000540659 GREB1LQ9C091 1923 aaPredicted RBP11.04□□□□□ -0.64
PAAF1-209ENST00000540659 SYCE3A1L190 88 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 PRPF3O43395 683 aaKnown RBP11.04□□□□□ -0.64
PAAF1-209ENST00000540659 DDNO94850 711 aaPredicted RBP11.04□□□□□ -0.64
PAAF1-209ENST00000540659 GOLGA8HP0CJ92 632 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 KIF5BP33176 963 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 SHMT1P34896 483 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 GABPAQ06546 454 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 GRM4Q14833 912 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 TNIP1Q15025 636 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 DLGAP5Q15398 846 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 PPP4R3BQ5MIZ7 849 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 DPY19L2Q6NUT2 758 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 BRAPQ7Z569 592 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 CLEC10AQ8IUN9 316 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 STAG2Q8N3U4 1231 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 BICD2Q8TD16 824 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 ANKS1AQ92625 1134 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 SYAP1Q96A49 352 aaPredicted RBP11.04□□□□□ -0.64
PAAF1-209ENST00000540659 CEP95Q96GE4 821 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 IDI2Q9BXS1 227 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 TMOD2Q9NZR1 351 aa11.04□□□□□ -0.64
PAAF1-209ENST00000540659 VPS54Q9P1Q0 977 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms