RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 AKNAD1Q5T1N1 836 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 ADALQ6DHV7 355 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 ZNF608Q9ULD9 1512 aaPredicted RBP12.31□□□□□ -0.44
PBX1-212ENST00000540236 ADAMTS2O95450 1211 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 SYF2O95926 243 aaKnown RBP12.31□□□□□ -0.44
PBX1-212ENST00000540236 MSH2P43246 934 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 PAPOLAP51003 745 aaKnown RBP12.31□□□□□ -0.44
PBX1-212ENST00000540236 CYP27A1Q02318 531 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 LMBRD2Q68DH5 695 aaPredicted RBP12.31□□□□□ -0.44
PBX1-212ENST00000540236 STMN2Q93045 179 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 EPN3Q9H201 632 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 GRIN2BQ13224 1484 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 SUPT3HO75486 399 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 GRIPAP1Q4V328 841 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 ACBD5Q5T8D3 534 aaPredicted RBP12.31□□□□□ -0.44
PBX1-212ENST00000540236 ZNF449Q6P9G9 518 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 KLHL23Q8NBE8 558 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 LRRC1Q9BTT6 524 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 PDCD2Q16342 344 aaPredicted RBP12.31□□□□□ -0.44
PBX1-212ENST00000540236 IFT74Q96LB3 600 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 LRWD1Q9UFC0 647 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 TOM1L2Q6ZVM7 507 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 ARFGAP2Q8N6H7 521 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 CHMP2BQ9UQN3 213 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 BZW2Q9Y6E2 419 aaKnown RBP12.3□□□□□ -0.44
PBX1-212ENST00000540236 GSTTP1A0A1W2PQM5 241 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 CTNND1O60716 968 aaKnown RBP12.3□□□□□ -0.44
PBX1-212ENST00000540236 DESP17661 470 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 TRIM65Q6PJ69 517 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 ARHGAP18Q8N392 663 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 KLHL29Q96CT2 875 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 PLEKHF1Q96S99 279 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 TCHPQ9BT92 498 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 AMOTQ4VCS5 1084 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 COG1Q8WTW3 980 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 ZKSCAN3Q9BRR0 538 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 KCNJ14Q9UNX9 436 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 MAP3K2Q9Y2U5 619 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 HEXIM1O94992 359 aaKnown RBP12.3□□□□□ -0.44
PBX1-212ENST00000540236 ATP6V1G2O95670 118 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 USP14P54578 494 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 RAD23BP54727 409 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 EZH2Q15910 746 aaKnown RBP12.3□□□□□ -0.44
PBX1-212ENST00000540236 NBPF9Q3BBW0 867 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 ZNF589Q86UQ0 364 aaPredicted RBP12.3□□□□□ -0.44
PBX1-212ENST00000540236 TRIM22Q8IYM9 498 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 CCDC155Q8N6L0 562 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 STIM2Q9P246 746 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 MYO1AQ9UBC5 1043 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 MAGI3Q5TCQ9 1506 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 BIVM-ERCC5R4GMW8 1640 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 PI4KAP2A4QPH2 592 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 PI4KAP1Q8N8J0 262 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 MS4A14Q96JA4 679 aa12.3□□□□□ -0.44
PBX1-212ENST00000540236 ARHGEF11O15085 1522 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 hCG_1642624A0A1W2PR95 340 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 RASSF10A6NK89 507 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 UBTFL6P0CB48 400 aaPredicted RBP12.29□□□□□ -0.44
PBX1-212ENST00000540236 MAP7D1Q3KQU3 841 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 TMTC1Q8IUR5 882 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 MAN1B1Q9UKM7 699 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 LSP1P33241 339 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 SWT1Q5T5J6 900 aaKnown RBP12.29□□□□□ -0.44
PBX1-212ENST00000540236 RSRC2Q7L4I2 434 aaKnown RBP12.29□□□□□ -0.44
PBX1-212ENST00000540236 TEKT4Q8WW24 435 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 TTC14Q96N46 770 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 CABP5Q9NP86 173 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 CEP104O60308 925 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 TUBB4BP68371 445 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 ADCY2Q08462 1091 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 LRRC14Q15048 493 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 CUL5Q93034 780 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 SLC4A4Q9Y6R1 1079 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 PRC1O43663 620 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 PECAM1P16284 738 aaPredicted RBP12.29□□□□□ -0.44
PBX1-212ENST00000540236 ZNF174Q15697 407 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 PREPLQ4J6C6 727 aaPredicted RBP12.29□□□□□ -0.44
PBX1-212ENST00000540236 TUBBP07437 444 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 GNAT2P19087 354 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 TUBB2AQ13885 445 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 DDX23Q9BUQ8 820 aaKnown RBP12.29□□□□□ -0.44
PBX1-212ENST00000540236 TUBB2BQ9BVA1 445 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 PCDHA5Q9Y5H7 936 aa12.29□□□□□ -0.44
PBX1-212ENST00000540236 EEF2P13639 858 aaKnown RBP12.28□□□□□ -0.44
PBX1-212ENST00000540236 IARSP41252 1262 aaKnown RBP12.28□□□□□ -0.44
PBX1-212ENST00000540236 NFRKBQ6P4R8 1299 aa12.28□□□□□ -0.44
PBX1-212ENST00000540236 CYFIP2Q96F07 1278 aa12.28□□□□□ -0.44
PBX1-212ENST00000540236 MLXIPQ9HAP2 919 aa12.28□□□□□ -0.44
PBX1-212ENST00000540236 PAPOLBQ9NRJ5 636 aaKnown RBP12.28□□□□□ -0.44
PBX1-212ENST00000540236 KDRP35968 1356 aa12.28□□□□□ -0.44
PBX1-212ENST00000540236 ZFYP08048 801 aaPredicted RBP12.28□□□□□ -0.44
PBX1-212ENST00000540236 SETDB1Q15047 1291 aa12.28□□□□□ -0.44
PBX1-212ENST00000540236 ARHGAP22Q7Z5H3 698 aa12.28□□□□□ -0.44
PBX1-212ENST00000540236 PPFIBP2Q8ND30 876 aa12.28□□□□□ -0.44
PBX1-212ENST00000540236 TSGA10Q9BZW7 698 aa12.28□□□□□ -0.44
PBX1-212ENST00000540236 DLGAP2Q9P1A6 1054 aa12.28□□□□□ -0.44
PBX1-212ENST00000540236 SCOCQ9UIL1 159 aa12.28□□□□□ -0.44
PBX1-212ENST00000540236 MDM1Q8TC05 714 aa12.28□□□□□ -0.44
PBX1-212ENST00000540236 SEC16BQ96JE7 1060 aa12.28□□□□□ -0.44
PBX1-212ENST00000540236 AP1M1Q9BXS5 423 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms