RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 CYP2C8P10632 490 aa15.98■□□□□ 0.15
CCDC130-202ENST00000540216 OSBPP22059 807 aa15.98■□□□□ 0.15
CCDC130-202ENST00000540216 HOXA7P31268 230 aaPredicted RBP15.98■□□□□ 0.15
CCDC130-202ENST00000540216 NMIQ13287 307 aaPredicted RBP15.98■□□□□ 0.15
CCDC130-202ENST00000540216 SEPT2Q15019 361 aa15.98■□□□□ 0.15
CCDC130-202ENST00000540216 CCDC129Q6ZRS4 1044 aa15.98■□□□□ 0.15
CCDC130-202ENST00000540216 SMCR8Q8TEV9 937 aaPredicted RBP15.98■□□□□ 0.15
CCDC130-202ENST00000540216 ABHD8Q96I13 439 aa15.98■□□□□ 0.15
CCDC130-202ENST00000540216 DIAPH3Q9NSV4 1193 aa15.98■□□□□ 0.15
CCDC130-202ENST00000540216 CCDC171Q6TFL3 1326 aa15.97■□□□□ 0.15
CCDC130-202ENST00000540216 GNRH1P01148 92 aa15.97■□□□□ 0.15
CCDC130-202ENST00000540216 NEFLP07196 543 aa15.97■□□□□ 0.15
CCDC130-202ENST00000540216 BCRP11274 1271 aa15.97■□□□□ 0.15
CCDC130-202ENST00000540216 AKR1B1P15121 316 aa15.97■□□□□ 0.15
CCDC130-202ENST00000540216 LACTBP83111 547 aaPredicted RBP15.97■□□□□ 0.15
CCDC130-202ENST00000540216 ALX1Q15699 326 aa15.97■□□□□ 0.15
CCDC130-202ENST00000540216 FBXO46Q6PJ61 603 aaPredicted RBP15.97■□□□□ 0.15
CCDC130-202ENST00000540216 CD99L2Q8TCZ2 262 aa15.97■□□□□ 0.15
CCDC130-202ENST00000540216 SH2D4AQ9H788 454 aa15.97■□□□□ 0.15
CCDC130-202ENST00000540216 CPA4Q9UI42 421 aa15.97■□□□□ 0.15
CCDC130-202ENST00000540216 ZMYM6O95789 1325 aa15.96■□□□□ 0.15
CCDC130-202ENST00000540216 SMIM22K7EJ46 135 aa15.96■□□□□ 0.15
CCDC130-202ENST00000540216 FOXP2O15409 715 aa15.96■□□□□ 0.15
CCDC130-202ENST00000540216 CENPBP07199 599 aaPredicted RBP15.96■□□□□ 0.15
CCDC130-202ENST00000540216 RASA1P20936 1047 aa15.96■□□□□ 0.15
CCDC130-202ENST00000540216 GCLCP48506 637 aaPredicted RBP15.96■□□□□ 0.15
CCDC130-202ENST00000540216 IRX3P78415 501 aaPredicted RBP15.96■□□□□ 0.15
CCDC130-202ENST00000540216 ICA1Q05084 483 aa15.96■□□□□ 0.15
CCDC130-202ENST00000540216 PDE4BQ07343 736 aa15.96■□□□□ 0.15
CCDC130-202ENST00000540216 PPARAQ07869 468 aa15.96■□□□□ 0.15
CCDC130-202ENST00000540216 OTOP1Q7RTM1 612 aa15.96■□□□□ 0.15
CCDC130-202ENST00000540216 ASCC2Q9H1I8 757 aaPredicted RBP15.96■□□□□ 0.15
CCDC130-202ENST00000540216 KANSL2Q9H9L4 492 aa15.96■□□□□ 0.15
CCDC130-202ENST00000540216 EFCC1Q9HA90 598 aa15.96■□□□□ 0.15
CCDC130-202ENST00000540216 MKNK2Q9HBH9 465 aa15.96■□□□□ 0.15
CCDC130-202ENST00000540216 ARHGEF10LQ9HCE6 1279 aa15.96■□□□□ 0.15
CCDC130-202ENST00000540216 TRIM17Q9Y577 477 aa15.96■□□□□ 0.15
CCDC130-202ENST00000540216 GSPT1P15170 499 aaKnown RBP15.95■□□□□ 0.14
CCDC130-202ENST00000540216 FAM110CQ1W6H9 321 aa15.95■□□□□ 0.14
CCDC130-202ENST00000540216 ACER1Q8TDN7 264 aa15.95■□□□□ 0.14
CCDC130-202ENST00000540216 GTF3C2Q8WUA4 911 aaPredicted RBP15.95■□□□□ 0.14
CCDC130-202ENST00000540216 EMILIN3Q9NT22 766 aa15.95■□□□□ 0.14
CCDC130-202ENST00000540216 GREB1LQ9C091 1923 aaPredicted RBP15.94■□□□□ 0.14
CCDC130-202ENST00000540216 VCAM1P19320 739 aa15.94■□□□□ 0.14
CCDC130-202ENST00000540216 VPS53Q5VIR6 699 aa15.94■□□□□ 0.14
CCDC130-202ENST00000540216 ZNF589Q86UQ0 364 aaPredicted RBP15.94■□□□□ 0.14
CCDC130-202ENST00000540216 ZNF444Q8N0Y2 327 aaPredicted RBP15.94■□□□□ 0.14
CCDC130-202ENST00000540216 LPAR1Q92633 364 aa15.94■□□□□ 0.14
CCDC130-202ENST00000540216 ANAPC4Q9UJX5 808 aa15.94■□□□□ 0.14
CCDC130-202ENST00000540216 PLIN4Q96Q06 1357 aa15.93■□□□□ 0.14
CCDC130-202ENST00000540216 A0A1W2PRG0 241 aa15.93■□□□□ 0.14
CCDC130-202ENST00000540216 USP17L15C9J2P7 530 aa15.93■□□□□ 0.14
CCDC130-202ENST00000540216 USP17L13C9JLJ4 530 aa15.93■□□□□ 0.14
CCDC130-202ENST00000540216 USP17L11C9JVI0 530 aa15.93■□□□□ 0.14
CCDC130-202ENST00000540216 USP17L18D6R9N7 530 aa15.93■□□□□ 0.14
CCDC130-202ENST00000540216 USP17L22D6RA61 530 aa15.93■□□□□ 0.14
CCDC130-202ENST00000540216 USP17L17D6RBQ6 530 aa15.93■□□□□ 0.14
CCDC130-202ENST00000540216 USP17L19D6RCP7 530 aa15.93■□□□□ 0.14
CCDC130-202ENST00000540216 USP17L20D6RJB6 530 aa15.93■□□□□ 0.14
CCDC130-202ENST00000540216 HSPD1P10809 573 aaKnown RBP15.93■□□□□ 0.14
CCDC130-202ENST00000540216 PRMT2P55345 433 aa15.93■□□□□ 0.14
CCDC130-202ENST00000540216 USP17L24Q0WX57 530 aa15.93■□□□□ 0.14
CCDC130-202ENST00000540216 ZYXQ15942 572 aaKnown RBP15.93■□□□□ 0.14
CCDC130-202ENST00000540216 CWC27Q6UX04 472 aaKnown RBP15.93■□□□□ 0.14
CCDC130-202ENST00000540216 TMX2Q9Y320 296 aa15.93■□□□□ 0.14
CCDC130-202ENST00000540216 RAD50Q92878 1312 aa15.93■□□□□ 0.14
CCDC130-202ENST00000540216 FGAP02671 866 aa15.92■□□□□ 0.14
CCDC130-202ENST00000540216 HOXD10P28358 340 aa15.92■□□□□ 0.14
CCDC130-202ENST00000540216 FCGRTP55899 365 aa15.92■□□□□ 0.14
CCDC130-202ENST00000540216 HERVK_113P62684 666 aa15.92■□□□□ 0.14
CCDC130-202ENST00000540216 SIAH1Q8IUQ4 282 aa15.92■□□□□ 0.14
CCDC130-202ENST00000540216 CCDC136Q96JN2 1154 aa15.92■□□□□ 0.14
CCDC130-202ENST00000540216 SYNPO2Q9UMS6 1093 aa15.92■□□□□ 0.14
CCDC130-202ENST00000540216 PTPN22Q9Y2R2 807 aa15.92■□□□□ 0.14
CCDC130-202ENST00000540216 PCP11498 1178 aaKnown RBP15.91■□□□□ 0.14
CCDC130-202ENST00000540216 EEF2P13639 858 aaKnown RBP15.91■□□□□ 0.14
CCDC130-202ENST00000540216 PSMC4P43686 418 aa15.91■□□□□ 0.14
CCDC130-202ENST00000540216 CAP1Q01518 475 aa15.91■□□□□ 0.14
CCDC130-202ENST00000540216 PPP4R3BQ5MIZ7 849 aa15.91■□□□□ 0.14
CCDC130-202ENST00000540216 CLEC10AQ8IUN9 316 aa15.91■□□□□ 0.14
CCDC130-202ENST00000540216 STK11IPQ8N1F8 1099 aa15.91■□□□□ 0.14
CCDC130-202ENST00000540216 ANKRD13CQ8N6S4 541 aa15.91■□□□□ 0.14
CCDC130-202ENST00000540216 RUFY2Q8WXA3 655 aa15.91■□□□□ 0.14
CCDC130-202ENST00000540216 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.91■□□□□ 0.14
CCDC130-202ENST00000540216 ARHGAP39Q9C0H5 1083 aa15.91■□□□□ 0.14
CCDC130-202ENST00000540216 VCPKMTQ9H867 229 aa15.91■□□□□ 0.14
CCDC130-202ENST00000540216 GOPCQ9HD26 462 aa15.91■□□□□ 0.14
CCDC130-202ENST00000540216 NYAP2Q9P242 653 aa15.91■□□□□ 0.14
CCDC130-202ENST00000540216 MORF4L1Q9UBU8 362 aa15.91■□□□□ 0.14
CCDC130-202ENST00000540216 HPS5Q9UPZ3 1129 aa15.91■□□□□ 0.14
CCDC130-202ENST00000540216 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
CCDC130-202ENST00000540216 IGKV6D-41A0A0C4DH26 115 aa15.9■□□□□ 0.14
CCDC130-202ENST00000540216 ORC4O43929 436 aa15.9■□□□□ 0.14
CCDC130-202ENST00000540216 PRDM1O75626 825 aa15.9■□□□□ 0.14
CCDC130-202ENST00000540216 FMNL1O95466 1100 aaPredicted RBP15.9■□□□□ 0.14
CCDC130-202ENST00000540216 TSPY3P0CV98 308 aa15.9■□□□□ 0.14
CCDC130-202ENST00000540216 TSPY8P0CW00 308 aa15.9■□□□□ 0.14
CCDC130-202ENST00000540216 LBX2Q6XYB7 198 aa15.9■□□□□ 0.14
CCDC130-202ENST00000540216 CATSPERGQ6ZRH7 1159 aa15.9■□□□□ 0.14
CCDC130-202ENST00000540216 NEDD1Q8NHV4 660 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms