RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 PLEKHA4Q9H4M7 779 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 SUFUQ9UMX1 484 aa9.86□□□□□ -0.83
DDB1-217ENST00000540166 KCPQ6ZWJ8 1503 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 ZNF804BA4D1E1 1349 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 UBN2Q6ZU65 1347 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 TADA3O75528 432 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 TAF5LO75529 589 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 TXLNAP40222 546 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 PPP2R5AQ15172 486 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 SLC10A5Q5PT55 438 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 SLF2Q8IX21 1173 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 A0A087WWV3 80 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 HIBADHP31937 336 aaKnown RBP9.85□□□□□ -0.83
DDB1-217ENST00000540166 CCT2P78371 535 aaKnown RBP9.85□□□□□ -0.83
DDB1-217ENST00000540166 APOBRQ0VD83 1088 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 MKRN3Q13064 507 aaKnown RBP9.85□□□□□ -0.83
DDB1-217ENST00000540166 SUPT20HL1Q3ZLR7 823 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 E4F1Q66K89 784 aaPredicted RBP9.85□□□□□ -0.83
DDB1-217ENST00000540166 PACS2Q86VP3 889 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 DZIP1Q86YF9 867 aaKnown RBP9.85□□□□□ -0.83
DDB1-217ENST00000540166 TTC14Q96N46 770 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 NEK1Q96PY6 1258 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 ZSWIM6Q9HCJ5 1215 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 NEURL1BA8MQ27 555 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 PSMD14O00487 310 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 SLC27A2O14975 620 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 CHRM1P11229 460 aaPredicted RBP9.85□□□□□ -0.83
DDB1-217ENST00000540166 CTCFP49711 727 aaPredicted RBP9.85□□□□□ -0.83
DDB1-217ENST00000540166 FAM160A1Q05DH4 1040 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 SF3B3Q15393 1217 aaKnown RBP9.85□□□□□ -0.83
DDB1-217ENST00000540166 EP400NLQ6ZTU2 488 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 PPFIBP1Q86W92 1011 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 HOOK2Q96ED9 719 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 ISCA1Q9BUE6 129 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 GLIS2Q9BZE0 524 aaPredicted RBP9.85□□□□□ -0.83
DDB1-217ENST00000540166 TM6SF1Q9BZW5 370 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 GREM2Q9H772 168 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 RAI14Q9P0K7 980 aa9.85□□□□□ -0.83
DDB1-217ENST00000540166 CTAGE15A4D2H0 777 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 CCDC85CA6NKD9 419 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 CPLX1O14810 134 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 TBC1D8O95759 1140 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 CTAGE8P0CG41 777 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 HSPA1AP0DMV8 641 aaKnown RBP9.84□□□□□ -0.83
DDB1-217ENST00000540166 HSPA1BP0DMV9 641 aaKnown RBP9.84□□□□□ -0.83
DDB1-217ENST00000540166 CTAGE6Q86UF2 777 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 POTEDQ86YR6 584 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 CTAGE4Q8IX94 777 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 OTUD6BQ8N6M0 293 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 CAGE1Q8TC20 777 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 MRPS27Q92552 414 aaKnown RBP9.84□□□□□ -0.83
DDB1-217ENST00000540166 KLRG1Q96E93 195 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 SLC10A4Q96EP9 437 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 COA1Q9GZY4 146 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 GBA2Q9HCG7 927 aaPredicted RBP9.84□□□□□ -0.83
DDB1-217ENST00000540166 HOOK1Q9UJC3 728 aaKnown RBP9.84□□□□□ -0.83
DDB1-217ENST00000540166 TUBB4BP68371 445 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 SARNPP82979 210 aaKnown RBP9.84□□□□□ -0.83
DDB1-217ENST00000540166 RNF187Q5TA31 235 aaPredicted RBP9.84□□□□□ -0.83
DDB1-217ENST00000540166 TBC1D16Q8TBP0 767 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 GGA3Q9NZ52 723 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 CSADQ9Y600 493 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 MYO3BQ8WXR4 1341 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 LTBP3Q9NS15 1303 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 ARHGAP6O43182 974 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 FANCCQ00597 558 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 TRIM28Q13263 835 aaKnown RBP9.84□□□□□ -0.83
DDB1-217ENST00000540166 LRRN4CLQ8ND94 238 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 FAM71BQ8TC56 605 aa9.84□□□□□ -0.83
DDB1-217ENST00000540166 BICC1Q9H694 974 aaKnown RBP9.84□□□□□ -0.83
DDB1-217ENST00000540166 RNF216Q9NWF9 866 aaPredicted RBP9.84□□□□□ -0.83
DDB1-217ENST00000540166 BIN2Q9UBW5 565 aaPredicted RBP9.84□□□□□ -0.83
DDB1-217ENST00000540166 PPFIA4O75335 1185 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 ZRANB2O95218 330 aaKnown RBP eCLIP9.83□□□□□ -0.843e-9■□□□□ 8.6
DDB1-217ENST00000540166 CCDC148Q8NFR7 591 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 BAG1Q99933 345 aaPredicted RBP9.83□□□□□ -0.84
DDB1-217ENST00000540166 FAM204AQ9H8W3 233 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 GPRC5DQ9NZD1 345 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 ABCC12Q96J65 1359 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 SBF2Q86WG5 1849 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 ZNF541Q9H0D2 1346 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 JAK2O60674 1132 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 ECM2O94769 699 aaPredicted RBP9.83□□□□□ -0.84
DDB1-217ENST00000540166 TUBBP07437 444 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 MCM3P25205 808 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 Q6ZUG5 572 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 FAM212AQ96EL1 285 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 CAPNS2Q96L46 248 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 LZTFL1Q9NQ48 299 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 CREBZFQ9NS37 354 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 NEBLO76041 1014 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 CORO7P57737 925 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 IQCB1Q15051 598 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 CEP57Q86XR8 500 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 AMOTL1Q8IY63 956 aa9.83□□□□□ -0.84
DDB1-217ENST00000540166 OSBPL5Q9H0X9 879 aaPredicted RBP9.83□□□□□ -0.84
DDB1-217ENST00000540166 BSDC1Q9NW68 430 aaPredicted RBP9.83□□□□□ -0.84
DDB1-217ENST00000540166 RPS6KB1P23443 525 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 TSR1Q2NL82 804 aaKnown RBP9.82□□□□□ -0.84
DDB1-217ENST00000540166 ANGEL2Q5VTE6 544 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms