RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 ZNF444Q8N0Y2 327 aaPredicted RBP20.6■□□□□ 0.89
SLC3A2-213ENST00000539458 NBPF3Q9H094 633 aa20.6■□□□□ 0.89
SLC3A2-213ENST00000539458 U3KPZ7 1027 aaPredicted RBP20.6■□□□□ 0.89
SLC3A2-213ENST00000539458 PTPRFP10586 1907 aa20.59■□□□□ 0.89
SLC3A2-213ENST00000539458 IGF2BP3O00425 579 aaKnown RBP eCLIP20.59■□□□□ 0.89
SLC3A2-213ENST00000539458 ORC4O43929 436 aa20.59■□□□□ 0.89
SLC3A2-213ENST00000539458 PCP11498 1178 aaKnown RBP20.59■□□□□ 0.89
SLC3A2-213ENST00000539458 STAG1Q8WVM7 1258 aa20.59■□□□□ 0.89
SLC3A2-213ENST00000539458 MAP4K1Q92918 833 aa20.59■□□□□ 0.89
SLC3A2-213ENST00000539458 PTPN18Q99952 460 aa20.59■□□□□ 0.89
SLC3A2-213ENST00000539458 LSG1Q9H089 658 aaKnown RBP20.59■□□□□ 0.89
SLC3A2-213ENST00000539458 SAGE1Q9NXZ1 904 aa20.59■□□□□ 0.89
SLC3A2-213ENST00000539458 TACC3Q9Y6A5 838 aa20.59■□□□□ 0.89
SLC3A2-213ENST00000539458 LOC285556D6RIA3 1793 aa20.59■□□□□ 0.89
SLC3A2-213ENST00000539458 PLIN4Q96Q06 1357 aa20.59■□□□□ 0.89
SLC3A2-213ENST00000539458 ALDH1A1P00352 501 aa20.58■□□□□ 0.89
SLC3A2-213ENST00000539458 MTMR2Q13614 643 aa20.58■□□□□ 0.89
SLC3A2-213ENST00000539458 MOGSQ13724 837 aa20.58■□□□□ 0.89
SLC3A2-213ENST00000539458 SH3D19Q5HYK7 790 aa20.58■□□□□ 0.89
SLC3A2-213ENST00000539458 AKNAD1Q5T1N1 836 aa20.58■□□□□ 0.89
SLC3A2-213ENST00000539458 OTUD7BQ6GQQ9 843 aa20.58■□□□□ 0.89
SLC3A2-213ENST00000539458 FASTKD5Q7L8L6 764 aaKnown RBP20.58■□□□□ 0.89
SLC3A2-213ENST00000539458 TBC1D10CQ8IV04 446 aa20.58■□□□□ 0.89
SLC3A2-213ENST00000539458 RNF41Q9H4P4 317 aaPredicted RBP20.58■□□□□ 0.89
SLC3A2-213ENST00000539458 ANO2Q9NQ90 1003 aa20.58■□□□□ 0.89
SLC3A2-213ENST00000539458 C19orf81C9J6K1 198 aa20.57■□□□□ 0.88
SLC3A2-213ENST00000539458 USP17L10C9JJH3 530 aa20.57■□□□□ 0.88
SLC3A2-213ENST00000539458 BACE1P56817 501 aa20.57■□□□□ 0.88
SLC3A2-213ENST00000539458 ICA1Q05084 483 aa20.57■□□□□ 0.88
SLC3A2-213ENST00000539458 MFSD6Q6ZSS7 791 aa20.57■□□□□ 0.88
SLC3A2-213ENST00000539458 PROCA1Q8NCQ7 364 aaPredicted RBP20.57■□□□□ 0.88
SLC3A2-213ENST00000539458 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.57■□□□□ 0.88
SLC3A2-213ENST00000539458 KANSL2Q9H9L4 492 aa20.57■□□□□ 0.88
SLC3A2-213ENST00000539458 INCENPQ9NQS7 918 aa20.57■□□□□ 0.88
SLC3A2-213ENST00000539458 RNF186Q9NXI6 227 aa20.57■□□□□ 0.88
SLC3A2-213ENST00000539458 BTBD19C9JJ37 291 aa20.56■□□□□ 0.88
SLC3A2-213ENST00000539458 TSPY3P0CV98 308 aa20.56■□□□□ 0.88
SLC3A2-213ENST00000539458 TSPY8P0CW00 308 aa20.56■□□□□ 0.88
SLC3A2-213ENST00000539458 HMGCS2P54868 508 aa20.56■□□□□ 0.88
SLC3A2-213ENST00000539458 TFAP4Q01664 338 aa20.56■□□□□ 0.88
SLC3A2-213ENST00000539458 ANKRD23Q86SG2 305 aa20.56■□□□□ 0.88
SLC3A2-213ENST00000539458 FAM43AQ8N2R8 423 aa20.56■□□□□ 0.88
SLC3A2-213ENST00000539458 NEDD1Q8NHV4 660 aa20.56■□□□□ 0.88
SLC3A2-213ENST00000539458 FEZ1Q99689 392 aa20.56■□□□□ 0.88
SLC3A2-213ENST00000539458 KIAA1683Q9H0B3 1180 aa20.56■□□□□ 0.88
SLC3A2-213ENST00000539458 ZCCHC17Q9NP64 241 aaKnown RBP20.56■□□□□ 0.88
SLC3A2-213ENST00000539458 TOMM22Q9NS69 142 aa20.56■□□□□ 0.88
SLC3A2-213ENST00000539458 RBM8AQ9Y5S9 174 aaKnown RBP20.56■□□□□ 0.88
SLC3A2-213ENST00000539458 IGKV6D-41A0A0C4DH26 115 aa20.55■□□□□ 0.88
SLC3A2-213ENST00000539458 TSPY2A6NKD2 308 aa20.55■□□□□ 0.88
SLC3A2-213ENST00000539458 TRPA1O75762 1119 aa20.55■□□□□ 0.88
SLC3A2-213ENST00000539458 NT5C2P49902 561 aa20.55■□□□□ 0.88
SLC3A2-213ENST00000539458 USP14P54578 494 aa20.55■□□□□ 0.88
SLC3A2-213ENST00000539458 FAM47AQ5JRC9 791 aa20.55■□□□□ 0.88
SLC3A2-213ENST00000539458 GADL1Q6ZQY3 521 aa20.55■□□□□ 0.88
SLC3A2-213ENST00000539458 CLEC10AQ8IUN9 316 aa20.55■□□□□ 0.88
SLC3A2-213ENST00000539458 ACER1Q8TDN7 264 aa20.55■□□□□ 0.88
SLC3A2-213ENST00000539458 SH2D4AQ9H788 454 aa20.55■□□□□ 0.88
SLC3A2-213ENST00000539458 ARHGEF10LQ9HCE6 1279 aa20.55■□□□□ 0.88
SLC3A2-213ENST00000539458 NEDD4P46934 1319 aa20.54■□□□□ 0.88
SLC3A2-213ENST00000539458 RANBP6O60518 1105 aaKnown RBP20.54■□□□□ 0.88
SLC3A2-213ENST00000539458 CYP21A2P08686 494 aa20.54■□□□□ 0.88
SLC3A2-213ENST00000539458 RRP12Q5JTH9 1297 aaKnown RBP20.54■□□□□ 0.88
SLC3A2-213ENST00000539458 GPAT2Q6NUI2 795 aa20.54■□□□□ 0.88
SLC3A2-213ENST00000539458 USP17L2Q6R6M4 530 aa20.54■□□□□ 0.88
SLC3A2-213ENST00000539458 SIAH1Q8IUQ4 282 aa20.54■□□□□ 0.88
SLC3A2-213ENST00000539458 CFHR5Q9BXR6 569 aa20.54■□□□□ 0.88
SLC3A2-213ENST00000539458 TMOD4Q9NZQ9 345 aa20.54■□□□□ 0.88
SLC3A2-213ENST00000539458 AGTPBP1Q9UPW5 1226 aa20.54■□□□□ 0.88
SLC3A2-213ENST00000539458 A0A1W2PRG0 241 aa20.53■□□□□ 0.88
SLC3A2-213ENST00000539458 SLC34A2O95436 690 aa20.53■□□□□ 0.88
SLC3A2-213ENST00000539458 EEF2P13639 858 aaKnown RBP20.53■□□□□ 0.88
SLC3A2-213ENST00000539458 C12orf42Q96LP6 360 aa20.53■□□□□ 0.88
SLC3A2-213ENST00000539458 CNNM2Q9H8M5 875 aa20.53■□□□□ 0.88
SLC3A2-213ENST00000539458 NYAP2Q9P242 653 aa20.53■□□□□ 0.88
SLC3A2-213ENST00000539458 SLC45A1Q9Y2W3 748 aa20.53■□□□□ 0.88
SLC3A2-213ENST00000539458 TMX2Q9Y320 296 aa20.53■□□□□ 0.88
SLC3A2-213ENST00000539458 PDHXO00330 501 aa20.52■□□□□ 0.88
SLC3A2-213ENST00000539458 ZYXQ15942 572 aaKnown RBP20.52■□□□□ 0.88
SLC3A2-213ENST00000539458 PPP4R3BQ5MIZ7 849 aa20.52■□□□□ 0.88
SLC3A2-213ENST00000539458 ESR2Q92731 530 aa20.52■□□□□ 0.88
SLC3A2-213ENST00000539458 CEP95Q96GE4 821 aa20.52■□□□□ 0.88
SLC3A2-213ENST00000539458 EMILIN3Q9NT22 766 aa20.52■□□□□ 0.88
SLC3A2-213ENST00000539458 MTMR4Q9NYA4 1195 aa20.52■□□□□ 0.88
SLC3A2-213ENST00000539458 REC8O95072 547 aa20.51■□□□□ 0.87
SLC3A2-213ENST00000539458 ATP2B2Q01814 1243 aa20.51■□□□□ 0.87
SLC3A2-213ENST00000539458 NECTIN1Q15223 517 aa20.51■□□□□ 0.87
SLC3A2-213ENST00000539458 TAF1CQ15572 869 aaPredicted RBP20.51■□□□□ 0.87
SLC3A2-213ENST00000539458 TREML2Q5T2D2 321 aa20.51■□□□□ 0.87
SLC3A2-213ENST00000539458 KRT23Q9C075 422 aa20.51■□□□□ 0.87
SLC3A2-213ENST00000539458 TTLL1O95922 423 aa20.5■□□□□ 0.87
SLC3A2-213ENST00000539458 PABPC4Q13310 644 aaKnown RBP eCLIP20.5■□□□□ 0.87
SLC3A2-213ENST00000539458 IL17RBQ9NRM6 502 aa20.5■□□□□ 0.87
SLC3A2-213ENST00000539458 TCP11L1Q9NUJ3 509 aa20.5■□□□□ 0.87
SLC3A2-213ENST00000539458 SYNPO2Q9UMS6 1093 aa20.5■□□□□ 0.87
SLC3A2-213ENST00000539458 B4E1Z4 1266 aa20.49■□□□□ 0.87
SLC3A2-213ENST00000539458 SLC27A2O14975 620 aa20.49■□□□□ 0.87
SLC3A2-213ENST00000539458 KDM4AO75164 1064 aa20.49■□□□□ 0.87
SLC3A2-213ENST00000539458 TBC1D8O95759 1140 aa20.49■□□□□ 0.87
SLC3A2-213ENST00000539458 CRHR2Q13324 411 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms