RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 ABCB5Q2M3G0 1257 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 CERKLQ49MI3 558 aaPredicted RBP10.47□□□□□ -0.73
DDB1-212ENST00000538470 SLC9C2Q5TAH2 1124 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 SIRT2Q8IXJ6 389 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 DPF3Q92784 378 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 DEFB118Q96PH6 123 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 DNAJC2Q99543 621 aaKnown RBP10.47□□□□□ -0.73
DDB1-212ENST00000538470 P2RX7Q99572 595 aaKnown RBP10.47□□□□□ -0.73
DDB1-212ENST00000538470 NUDT12Q9BQG2 462 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 HMX1Q9NP08 348 aaPredicted RBP10.47□□□□□ -0.73
DDB1-212ENST00000538470 RCAN3Q9UKA8 241 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 NR2E3Q9Y5X4 410 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 RPTORQ8N122 1335 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 ZNF532Q9HCE3 1301 aa10.47□□□□□ -0.73
DDB1-212ENST00000538470 GREB1LQ9C091 1923 aaPredicted RBP10.46□□□□□ -0.73
DDB1-212ENST00000538470 TCRBV5S4A2TA0A5A2 114 aa10.46□□□□□ -0.73
DDB1-212ENST00000538470 TFRCP02786 760 aaKnown RBP10.46□□□□□ -0.73
DDB1-212ENST00000538470 POLR3DP05423 398 aaPredicted RBP10.46□□□□□ -0.73
DDB1-212ENST00000538470 VCAM1P19320 739 aa10.46□□□□□ -0.73
DDB1-212ENST00000538470 FXR1P51114 621 aaKnown RBP eCLIP10.46□□□□□ -0.733e-6■■■□□ 19
DDB1-212ENST00000538470 CCNA1P78396 465 aa10.46□□□□□ -0.73
DDB1-212ENST00000538470 RAB3GAP1Q15042 981 aa10.46□□□□□ -0.73
DDB1-212ENST00000538470 LBX2Q6XYB7 198 aa10.46□□□□□ -0.73
DDB1-212ENST00000538470 CCAR1Q8IX12 1150 aaKnown RBP10.46□□□□□ -0.73
DDB1-212ENST00000538470 TRIB2Q92519 343 aa10.46□□□□□ -0.73
DDB1-212ENST00000538470 APBA2Q99767 749 aa10.46□□□□□ -0.73
DDB1-212ENST00000538470 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.46□□□□□ -0.732e-6■■□□□ 12.2
DDB1-212ENST00000538470 TXNRD2Q9NNW7 524 aa10.46□□□□□ -0.73
DDB1-212ENST00000538470 PAG1Q9NWQ8 432 aa10.46□□□□□ -0.73
DDB1-212ENST00000538470 MCM9Q9NXL9 1143 aa10.46□□□□□ -0.73
DDB1-212ENST00000538470 RBPJLQ9UBG7 517 aa10.46□□□□□ -0.73
DDB1-212ENST00000538470 SWAP70Q9UH65 585 aa10.46□□□□□ -0.73
DDB1-212ENST00000538470 COLQQ9Y215 455 aaPredicted RBP10.46□□□□□ -0.73
DDB1-212ENST00000538470 RABGAP1Q9Y3P9 1069 aa10.46□□□□□ -0.73
DDB1-212ENST00000538470 APBB1O00213 710 aa10.45□□□□□ -0.74
DDB1-212ENST00000538470 GLRX3O76003 335 aaKnown RBP10.45□□□□□ -0.74
DDB1-212ENST00000538470 ZKSCAN1P17029 563 aaPredicted RBP10.45□□□□□ -0.74
DDB1-212ENST00000538470 ATP5JP18859 108 aa10.45□□□□□ -0.74
DDB1-212ENST00000538470 ADD2P35612 726 aa10.45□□□□□ -0.74
DDB1-212ENST00000538470 RGS2P41220 211 aa10.45□□□□□ -0.74
DDB1-212ENST00000538470 PLCD1P51178 756 aa10.45□□□□□ -0.74
DDB1-212ENST00000538470 ZYXQ15942 572 aaKnown RBP10.45□□□□□ -0.74
DDB1-212ENST00000538470 MAP3K21Q5TCX8 1036 aa10.45□□□□□ -0.74
DDB1-212ENST00000538470 CATSPERGQ6ZRH7 1159 aa10.45□□□□□ -0.74
DDB1-212ENST00000538470 GPR142Q7Z601 462 aa10.45□□□□□ -0.74
DDB1-212ENST00000538470 NECAB2Q7Z6G3 386 aa10.45□□□□□ -0.74
DDB1-212ENST00000538470 PLEKHH3Q7Z736 793 aa10.45□□□□□ -0.74
DDB1-212ENST00000538470 AMOTL1Q8IY63 956 aa10.45□□□□□ -0.74
DDB1-212ENST00000538470 LCORLQ8N3X6 602 aa10.45□□□□□ -0.74
DDB1-212ENST00000538470 HAUS7Q99871 368 aa10.45□□□□□ -0.74
DDB1-212ENST00000538470 PAGR1Q9BTK6 254 aa10.45□□□□□ -0.74
DDB1-212ENST00000538470 DCP1AQ9NPI6 582 aaPredicted RBP10.45□□□□□ -0.74
DDB1-212ENST00000538470 ATP8A2Q9NTI2 1148 aa10.45□□□□□ -0.74
DDB1-212ENST00000538470 A0A1W2PPC1 479 aa10.44□□□□□ -0.74
DDB1-212ENST00000538470 CYP2B6P20813 491 aa10.44□□□□□ -0.74
DDB1-212ENST00000538470 MORN1Q5T089 497 aa10.44□□□□□ -0.74
DDB1-212ENST00000538470 ZSCAN25Q6NSZ9 544 aa10.44□□□□□ -0.74
DDB1-212ENST00000538470 CHRDL2Q6WN34 429 aa10.44□□□□□ -0.74
DDB1-212ENST00000538470 TMEM179Q6ZVK1 233 aa10.44□□□□□ -0.74
DDB1-212ENST00000538470 USP6NLQ92738 828 aa10.44□□□□□ -0.74
DDB1-212ENST00000538470 LRRCC1Q9C099 1032 aa10.44□□□□□ -0.74
DDB1-212ENST00000538470 PORCNQ9H237 461 aa10.44□□□□□ -0.74
DDB1-212ENST00000538470 SH2D4AQ9H788 454 aa10.44□□□□□ -0.74
DDB1-212ENST00000538470 CWC22Q9HCG8 908 aaKnown RBP10.44□□□□□ -0.74
DDB1-212ENST00000538470 COL11A1P12107 1806 aaPredicted RBP10.44□□□□□ -0.74
DDB1-212ENST00000538470 RANBP2P49792 3224 aaKnown RBP10.43□□□□□ -0.74
DDB1-212ENST00000538470 SPDYE16A6NNV3 312 aaPredicted RBP10.43□□□□□ -0.74
DDB1-212ENST00000538470 EVI5O60447 810 aa10.43□□□□□ -0.74
DDB1-212ENST00000538470 CNMDO75829 334 aa10.43□□□□□ -0.74
DDB1-212ENST00000538470 MBD4O95243 580 aa10.43□□□□□ -0.74
DDB1-212ENST00000538470 PRKAR2AP13861 404 aaKnown RBP10.43□□□□□ -0.74
DDB1-212ENST00000538470 GUCY1A2P33402 732 aa10.43□□□□□ -0.74
DDB1-212ENST00000538470 MAP2K5Q13163 448 aa10.43□□□□□ -0.74
DDB1-212ENST00000538470 SEPT2Q15019 361 aa10.43□□□□□ -0.74
DDB1-212ENST00000538470 UBE3CQ15386 1083 aa10.43□□□□□ -0.74
DDB1-212ENST00000538470 ACER1Q8TDN7 264 aa10.43□□□□□ -0.74
DDB1-212ENST00000538470 SDR42E1Q8WUS8 393 aa10.43□□□□□ -0.74
DDB1-212ENST00000538470 LPAR1Q92633 364 aa10.43□□□□□ -0.74
DDB1-212ENST00000538470 DDRGK1Q96HY6 314 aa10.43□□□□□ -0.74
DDB1-212ENST00000538470 PRO3102Q9H379 93 aa10.43□□□□□ -0.74
DDB1-212ENST00000538470 BOLA2Q9H3K6 86 aa10.43□□□□□ -0.74
DDB1-212ENST00000538470 RPAP3Q9H6T3 665 aaPredicted RBP10.43□□□□□ -0.74
DDB1-212ENST00000538470 OGDHLQ9ULD0 1010 aa10.43□□□□□ -0.74
DDB1-212ENST00000538470 SLC15A5A6NIM6 579 aa10.42□□□□□ -0.74
DDB1-212ENST00000538470 MPHOSPH10O00566 681 aaKnown RBP10.42□□□□□ -0.74
DDB1-212ENST00000538470 TRIM32Q13049 653 aa10.42□□□□□ -0.74
DDB1-212ENST00000538470 GRB14Q14449 540 aa10.42□□□□□ -0.74
DDB1-212ENST00000538470 Q3C1V9 767 aa10.42□□□□□ -0.74
DDB1-212ENST00000538470 POTEEQ6S8J3 1075 aa10.42□□□□□ -0.74
DDB1-212ENST00000538470 MB21D1Q8N884 522 aa10.42□□□□□ -0.74
DDB1-212ENST00000538470 EDC3Q96F86 508 aaKnown RBP10.42□□□□□ -0.74
DDB1-212ENST00000538470 GPATCH3Q96I76 525 aa10.42□□□□□ -0.74
DDB1-212ENST00000538470 PAWRQ96IZ0 340 aaKnown RBP10.42□□□□□ -0.74
DDB1-212ENST00000538470 CCDC17Q96LX7 622 aa10.42□□□□□ -0.74
DDB1-212ENST00000538470 NBPF3Q9H094 633 aa10.42□□□□□ -0.74
DDB1-212ENST00000538470 C11orf49Q9H6J7 331 aa10.42□□□□□ -0.74
DDB1-212ENST00000538470 ARMT1Q9H993 441 aa10.42□□□□□ -0.74
DDB1-212ENST00000538470 ARHGEF10LQ9HCE6 1279 aa10.42□□□□□ -0.74
DDB1-212ENST00000538470 IVNS1ABPQ9Y6Y0 642 aa10.42□□□□□ -0.74
DDB1-212ENST00000538470 MYH4Q9Y623 1939 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms