RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 NTRK3Q16288 839 aa17.63■□□□□ 0.41
PXN-208ENST00000538144 KIF4BQ2VIQ3 1234 aa17.63■□□□□ 0.41
PXN-208ENST00000538144 FKBP1CQ5VVH2 108 aa17.63■□□□□ 0.41
PXN-208ENST00000538144 ANKS1AQ92625 1134 aa17.63■□□□□ 0.41
PXN-208ENST00000538144 CEP95Q96GE4 821 aa17.63■□□□□ 0.41
PXN-208ENST00000538144 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.63■□□□□ 0.41
PXN-208ENST00000538144 TMEM39BQ9GZU3 492 aa17.63■□□□□ 0.41
PXN-208ENST00000538144 KAT14Q9H8E8 782 aa17.63■□□□□ 0.41
PXN-208ENST00000538144 NID2Q14112 1375 aa17.63■□□□□ 0.41
PXN-208ENST00000538144 MPHOSPH10O00566 681 aaKnown RBP17.63■□□□□ 0.41
PXN-208ENST00000538144 DDNO94850 711 aaPredicted RBP17.63■□□□□ 0.41
PXN-208ENST00000538144 RCAN1P53805 252 aa17.63■□□□□ 0.41
PXN-208ENST00000538144 CPLX2Q6PUV4 134 aaKnown RBP17.63■□□□□ 0.41
PXN-208ENST00000538144 PHKBQ93100 1093 aa17.63■□□□□ 0.41
PXN-208ENST00000538144 GPRC5DQ9NZD1 345 aa17.63■□□□□ 0.41
PXN-208ENST00000538144 ASTN2O75129 1339 aaPredicted RBP17.62■□□□□ 0.41
PXN-208ENST00000538144 DDAH1O94760 285 aa17.62■□□□□ 0.41
PXN-208ENST00000538144 FOSBP53539 338 aa17.62■□□□□ 0.41
PXN-208ENST00000538144 FAM83AQ86UY5 434 aa17.62■□□□□ 0.41
PXN-208ENST00000538144 CMTR1Q8N1G2 835 aaKnown RBP17.62■□□□□ 0.41
PXN-208ENST00000538144 PNMA1Q8ND90 353 aa17.62■□□□□ 0.41
PXN-208ENST00000538144 TMEM47Q9BQJ4 181 aa17.62■□□□□ 0.41
PXN-208ENST00000538144 ORC3Q9UBD5 711 aaPredicted RBP17.62■□□□□ 0.41
PXN-208ENST00000538144 MTMR6Q9Y217 621 aa17.62■□□□□ 0.41
PXN-208ENST00000538144 CCDC196A0A1B0GTZ2 297 aa17.61■□□□□ 0.41
PXN-208ENST00000538144 CDKL5O76039 1030 aa17.61■□□□□ 0.41
PXN-208ENST00000538144 CALM1P0DP23 149 aa17.61■□□□□ 0.41
PXN-208ENST00000538144 CALM2P0DP24 149 aa17.61■□□□□ 0.41
PXN-208ENST00000538144 CALM3P0DP25 149 aa17.61■□□□□ 0.41
PXN-208ENST00000538144 ZSCAN22P10073 491 aaPredicted RBP17.61■□□□□ 0.41
PXN-208ENST00000538144 CERKLQ49MI3 558 aaPredicted RBP17.61■□□□□ 0.41
PXN-208ENST00000538144 TATDN1Q6P1N9 297 aa17.61■□□□□ 0.41
PXN-208ENST00000538144 METTL16Q86W50 562 aaKnown RBP17.61■□□□□ 0.41
PXN-208ENST00000538144 CDAN1Q8IWY9 1227 aa17.61■□□□□ 0.41
PXN-208ENST00000538144 CCDC82Q8N4S0 544 aa17.61■□□□□ 0.41
PXN-208ENST00000538144 KIF3AQ9Y496 699 aa17.61■□□□□ 0.41
PXN-208ENST00000538144 PLIN4Q96Q06 1357 aa17.61■□□□□ 0.41
PXN-208ENST00000538144 EPS15P42566 896 aa17.61■□□□□ 0.41
PXN-208ENST00000538144 TNNI2P48788 182 aa17.61■□□□□ 0.41
PXN-208ENST00000538144 CLEC10AQ8IUN9 316 aa17.61■□□□□ 0.41
PXN-208ENST00000538144 CCDC17Q96LX7 622 aa17.61■□□□□ 0.41
PXN-208ENST00000538144 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.61■□□□□ 0.412e-6■■■□□ 18.4
PXN-208ENST00000538144 HACL1Q9UJ83 578 aa17.61■□□□□ 0.41
PXN-208ENST00000538144 MTMR7Q9Y216 660 aa17.61■□□□□ 0.41
PXN-208ENST00000538144 RASA3Q14644 834 aa17.6■□□□□ 0.41
PXN-208ENST00000538144 PPP2R5BQ15173 497 aa17.6■□□□□ 0.41
PXN-208ENST00000538144 SHROOM1Q2M3G4 852 aaPredicted RBP17.6■□□□□ 0.41
PXN-208ENST00000538144 L1TD1Q5T7N2 865 aaKnown RBP17.6■□□□□ 0.41
PXN-208ENST00000538144 CDC37L1Q7L3B6 337 aa17.6■□□□□ 0.41
PXN-208ENST00000538144 TRPM4Q8TD43 1214 aa17.6■□□□□ 0.41
PXN-208ENST00000538144 MTMR4Q9NYA4 1195 aa17.6■□□□□ 0.41
PXN-208ENST00000538144 GREB1LQ9C091 1923 aaPredicted RBP17.6■□□□□ 0.41
PXN-208ENST00000538144 MYH6P13533 1939 aa17.59■□□□□ 0.41
PXN-208ENST00000538144 IGKV6D-41A0A0C4DH26 115 aa17.59■□□□□ 0.41
PXN-208ENST00000538144 H3BQV1 296 aa17.59■□□□□ 0.41
PXN-208ENST00000538144 IFNAR1P17181 557 aa17.59■□□□□ 0.41
PXN-208ENST00000538144 SSRP1Q08945 709 aaKnown RBP17.59■□□□□ 0.41
PXN-208ENST00000538144 FOXD4L6Q3SYB3 417 aaPredicted RBP17.59■□□□□ 0.41
PXN-208ENST00000538144 IFFO2Q5TF58 517 aa17.59■□□□□ 0.41
PXN-208ENST00000538144 FOXD4L3Q6VB84 417 aaPredicted RBP17.59■□□□□ 0.41
PXN-208ENST00000538144 CTCFLQ8NI51 663 aaPredicted RBP17.59■□□□□ 0.41
PXN-208ENST00000538144 CHAMP1Q96JM3 812 aa17.59■□□□□ 0.41
PXN-208ENST00000538144 SLC26A6Q9BXS9 759 aa17.59■□□□□ 0.41
PXN-208ENST00000538144 RBM28Q9NW13 759 aaKnown RBP17.59■□□□□ 0.41
PXN-208ENST00000538144 HERC5Q9UII4 1024 aaKnown RBP17.59■□□□□ 0.41
PXN-208ENST00000538144 MYH4Q9Y623 1939 aa17.59■□□□□ 0.41
PXN-208ENST00000538144 GDF11O95390 407 aa17.58■□□□□ 0.41
PXN-208ENST00000538144 PLEKHA8P1O95397 391 aa17.58■□□□□ 0.41
PXN-208ENST00000538144 F13A1P00488 732 aa17.58■□□□□ 0.41
PXN-208ENST00000538144 TOP1P11387 765 aaKnown RBP17.58■□□□□ 0.41
PXN-208ENST00000538144 PDIA4P13667 645 aaKnown RBP17.58■□□□□ 0.41
PXN-208ENST00000538144 NOVP48745 357 aa17.58■□□□□ 0.41
PXN-208ENST00000538144 PGAP2Q9UHJ9 254 aa17.58■□□□□ 0.41
PXN-208ENST00000538144 TAOK2Q9UL54 1235 aa17.58■□□□□ 0.41
PXN-208ENST00000538144 ISY1Q9ULR0 285 aaKnown RBP17.58■□□□□ 0.41
PXN-208ENST00000538144 TCHHQ07283 1943 aa17.58■□□□□ 0.4
PXN-208ENST00000538144 UBE2Q2LH0YL09 131 aa17.58■□□□□ 0.4
PXN-208ENST00000538144 TNFAIP1Q13829 316 aa17.58■□□□□ 0.4
PXN-208ENST00000538144 RRP1BQ14684 758 aaKnown RBP17.58■□□□□ 0.4
PXN-208ENST00000538144 MIGA2Q7L4E1 593 aa17.58■□□□□ 0.4
PXN-208ENST00000538144 NBPF11Q86T75 865 aa17.58■□□□□ 0.4
PXN-208ENST00000538144 CLIP2Q9UDT6 1046 aa17.58■□□□□ 0.4
PXN-208ENST00000538144 GOLGA6L22H0YM25 854 aa17.57■□□□□ 0.4
PXN-208ENST00000538144 SOCS7O14512 581 aa17.57■□□□□ 0.4
PXN-208ENST00000538144 GRIN3BO60391 1043 aa17.57■□□□□ 0.4
PXN-208ENST00000538144 FMNL1O95466 1100 aaPredicted RBP17.57■□□□□ 0.4
PXN-208ENST00000538144 TTLL1O95922 423 aa17.57■□□□□ 0.4
PXN-208ENST00000538144 ATP2B2Q01814 1243 aa17.57■□□□□ 0.4
PXN-208ENST00000538144 GUCY1B3Q02153 619 aa17.57■□□□□ 0.4
PXN-208ENST00000538144 ABCB5Q2M3G0 1257 aa17.57■□□□□ 0.4
PXN-208ENST00000538144 ANGEL2Q5VTE6 544 aaKnown RBP17.57■□□□□ 0.4
PXN-208ENST00000538144 FERMT3Q86UX7 667 aa17.57■□□□□ 0.4
PXN-208ENST00000538144 AIFM3Q96NN9 605 aa17.57■□□□□ 0.4
PXN-208ENST00000538144 POLR2AP24928 1970 aaKnown RBP17.57■□□□□ 0.4
PXN-208ENST00000538144 BAZ2BQ9UIF8 2168 aaKnown RBP17.57■□□□□ 0.4
PXN-208ENST00000538144 LMOD1P29536 600 aaPredicted RBP17.56■□□□□ 0.4
PXN-208ENST00000538144 HIRAP54198 1017 aaPredicted RBP17.56■□□□□ 0.4
PXN-208ENST00000538144 KLHL40Q2TBA0 621 aa17.56■□□□□ 0.4
PXN-208ENST00000538144 TMTC3Q6ZXV5 915 aa17.56■□□□□ 0.4
PXN-208ENST00000538144 TRIM22Q8IYM9 498 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms