RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 EDC4Q6P2E9 1401 aaKnown RBP12.47□□□□□ -0.41
LINC00346-201ENST00000538077 JAK2O60674 1132 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 HPDP32754 393 aaPredicted RBP12.47□□□□□ -0.41
LINC00346-201ENST00000538077 PAK1Q13153 545 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 CASC4Q6P4E1 433 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 NELFBQ8WX92 580 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
LINC00346-201ENST00000538077 SLU7O95391 586 aaKnown RBP12.47□□□□□ -0.41
LINC00346-201ENST00000538077 TECP42680 631 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 MMS19Q96T76 1030 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 MTRF1LQ9UGC7 380 aaKnown RBP12.47□□□□□ -0.41
LINC00346-201ENST00000538077 ANAPC4Q9UJX5 808 aa12.47□□□□□ -0.41
LINC00346-201ENST00000538077 SYNJ2BP-COX16A0A087WUM0 186 aa12.46□□□□□ -0.41
LINC00346-201ENST00000538077 CARD10Q9BWT7 1032 aa12.46□□□□□ -0.41
LINC00346-201ENST00000538077 COX16Q9P0S2 106 aa12.46□□□□□ -0.41
LINC00346-201ENST00000538077 PPEF1O14829 653 aaPredicted RBP12.46□□□□□ -0.41
LINC00346-201ENST00000538077 PNOCQ13519 176 aa12.46□□□□□ -0.41
LINC00346-201ENST00000538077 NOP9Q86U38 636 aaKnown RBP12.46□□□□□ -0.41
LINC00346-201ENST00000538077 NLRX1Q86UT6 975 aa12.46□□□□□ -0.41
LINC00346-201ENST00000538077 TRMT44Q8IYL2 757 aaKnown RBP12.46□□□□□ -0.41
LINC00346-201ENST00000538077 SEPT10Q9P0V9 454 aa12.46□□□□□ -0.41
LINC00346-201ENST00000538077 NEURL1BA8MQ27 555 aa12.46□□□□□ -0.41
LINC00346-201ENST00000538077 GAS7O60861 476 aa12.46□□□□□ -0.41
LINC00346-201ENST00000538077 YARSP54577 528 aaKnown RBP12.46□□□□□ -0.41
LINC00346-201ENST00000538077 DCUN1D2Q6PH85 259 aa12.46□□□□□ -0.41
LINC00346-201ENST00000538077 SPICE1Q8N0Z3 855 aa12.46□□□□□ -0.41
LINC00346-201ENST00000538077 MYL5Q02045 173 aa12.46□□□□□ -0.42
LINC00346-201ENST00000538077 PPP1R16BQ96T49 567 aa12.46□□□□□ -0.42
LINC00346-201ENST00000538077 RILPL1Q5EBL4 403 aa12.46□□□□□ -0.42
LINC00346-201ENST00000538077 CDC37L1Q7L3B6 337 aa12.46□□□□□ -0.42
LINC00346-201ENST00000538077 ST7Q9NRC1 585 aa12.46□□□□□ -0.42
LINC00346-201ENST00000538077 CTTNBP2NLQ9P2B4 639 aa12.46□□□□□ -0.42
LINC00346-201ENST00000538077 ARHGEF10O15013 1369 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 ITIH3Q06033 890 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 DEPTORQ8TB45 409 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 RABEP2Q9H5N1 569 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 TBX22Q9Y458 520 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC00346-201ENST00000538077 E7EWF7 191 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 TNNC1P63316 161 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC00346-201ENST00000538077 SUGCTQ9HAC7 445 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 ATP10AO60312 1499 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 ITKQ08881 620 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 LRRC24Q50LG9 513 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 ANKS4BQ8N8V4 417 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 SNX21Q969T3 373 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 LRRIQ1Q96JM4 1722 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 COBLO75128 1261 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 RPS8P62241 208 aaKnown RBP12.45□□□□□ -0.42
LINC00346-201ENST00000538077 CERKLQ49MI3 558 aaPredicted RBP12.45□□□□□ -0.42
LINC00346-201ENST00000538077 ANKRD35Q8N283 1001 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 KIAA1524Q8TCG1 905 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 RIOK1Q9BRS2 568 aaKnown RBP12.45□□□□□ -0.42
LINC00346-201ENST00000538077 STK10O94804 968 aaKnown RBP12.45□□□□□ -0.42
LINC00346-201ENST00000538077 HSPA1LP34931 641 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 EIF4A1P60842 406 aaKnown RBP12.45□□□□□ -0.42
LINC00346-201ENST00000538077 KRT25Q7Z3Z0 450 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 KLHL7Q8IXQ5 586 aa12.45□□□□□ -0.42
LINC00346-201ENST00000538077 USP17L12C9JPN9 530 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 USP17L21D6R901 530 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 CHRNDQ07001 517 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 POLA2Q14181 598 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 SCYL2Q6P3W7 929 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 SULF1Q8IWU6 871 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 TAB3Q8N5C8 712 aaPredicted RBP12.44□□□□□ -0.42
LINC00346-201ENST00000538077 DBNDD1Q9H9R9 158 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 TRIM35Q9UPQ4 493 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 KDM6BO15054 1643 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 KSR1Q8IVT5 923 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 SPC25Q9HBM1 224 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 ANKFY1Q9P2R3 1169 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 CETN3O15182 167 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 FLOT1O75955 427 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 CPLX4Q7Z7G2 160 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 C4orf50Q6ZRC1 276 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 CNGA4Q8IV77 575 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 FAM193BQ96PV7 902 aaPredicted RBP12.44□□□□□ -0.42
LINC00346-201ENST00000538077 ZSCAN10Q96SZ4 725 aaPredicted RBP12.44□□□□□ -0.42
LINC00346-201ENST00000538077 PCDHB13Q9Y5F0 798 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 KDRP35968 1356 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 KRT40Q6A162 431 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 SPATA24Q86W54 205 aa12.44□□□□□ -0.42
LINC00346-201ENST00000538077 LSM14BQ9BX40 385 aaKnown RBP12.44□□□□□ -0.42
LINC00346-201ENST00000538077 GPBP1Q86WP2 473 aa12.43□□□□□ -0.42
LINC00346-201ENST00000538077 UTP11Q9Y3A2 253 aaKnown RBP12.43□□□□□ -0.42
LINC00346-201ENST00000538077 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
LINC00346-201ENST00000538077 DKC1O60832 514 aaKnown RBP eCLIP12.43□□□□□ -0.42
LINC00346-201ENST00000538077 CRKLP46109 303 aaKnown RBP12.43□□□□□ -0.42
LINC00346-201ENST00000538077 PPP2R3AQ06190 1150 aa12.43□□□□□ -0.42
LINC00346-201ENST00000538077 CYP26C1Q6V0L0 522 aa12.43□□□□□ -0.42
LINC00346-201ENST00000538077 NSMCE1Q8WV22 266 aa12.43□□□□□ -0.42
LINC00346-201ENST00000538077 RTEL1Q9NZ71 1219 aa12.43□□□□□ -0.42
LINC00346-201ENST00000538077 PHKG2P15735 406 aa12.43□□□□□ -0.42
LINC00346-201ENST00000538077 MAN1A1P33908 653 aa12.43□□□□□ -0.42
LINC00346-201ENST00000538077 CCDC121Q6ZUS5 278 aa12.43□□□□□ -0.42
LINC00346-201ENST00000538077 OTUD6AQ7L8S5 288 aa12.43□□□□□ -0.42
LINC00346-201ENST00000538077 UBL4BQ8N7F7 174 aa12.43□□□□□ -0.42
LINC00346-201ENST00000538077 KBTBD3Q8NAB2 608 aa12.43□□□□□ -0.42
LINC00346-201ENST00000538077 GTF3C6Q969F1 213 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms