RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 SF3A1Q15459 793 aaKnown RBP12.85□□□□□ -0.35
SEMA4D-221ENST00000537934 PTPN21Q16825 1174 aa12.85□□□□□ -0.35
SEMA4D-221ENST00000537934 SUSD4Q5VX71 490 aa12.85□□□□□ -0.35
SEMA4D-221ENST00000537934 FMNL3Q8IVF7 1028 aa12.85□□□□□ -0.35
SEMA4D-221ENST00000537934 NEK1Q96PY6 1258 aa12.85□□□□□ -0.35
SEMA4D-221ENST00000537934 MCM3P25205 808 aa12.85□□□□□ -0.35
SEMA4D-221ENST00000537934 IRX1P78414 480 aaPredicted RBP12.85□□□□□ -0.35
SEMA4D-221ENST00000537934 CRYMQ14894 314 aa12.85□□□□□ -0.35
SEMA4D-221ENST00000537934 WLSQ5T9L3 541 aa12.85□□□□□ -0.35
SEMA4D-221ENST00000537934 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.85□□□□□ -0.35
SEMA4D-221ENST00000537934 RGS17Q9UGC6 210 aaPredicted RBP12.85□□□□□ -0.35
SEMA4D-221ENST00000537934 NIP7Q9Y221 180 aaKnown RBP eCLIP12.85□□□□□ -0.35
SEMA4D-221ENST00000537934 MED23Q9ULK4 1368 aa12.85□□□□□ -0.35
SEMA4D-221ENST00000537934 H0YHG0 523 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 EIF3HO15372 352 aaKnown RBP eCLIP12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 NEBLO76041 1014 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 FOSBP53539 338 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 STIM1Q13586 685 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 ZNF569Q5MCW4 686 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 USPL1Q5W0Q7 1092 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 AACSQ86V21 672 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 SPATS2Q86XZ4 545 aaKnown RBP12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 EAF2Q96CJ1 260 aaPredicted RBP12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 ADGRG1Q9Y653 693 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 A0A0D9SFI3 127 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 PTPDC1A2A3K4 754 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 IRS4O14654 1257 aaPredicted RBP12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 CTDNEP1O95476 244 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 YEATS4O95619 227 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 MRPL12P52815 198 aaKnown RBP12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 STK38Q15208 465 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 B4GALNT4Q76KP1 1039 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 COG1Q8WTW3 980 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 CAPS2Q9BXY5 557 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 CD248Q9HCU0 757 aa12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 TLR7Q9NYK1 1049 aaKnown RBP12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 SRP68Q9UHB9 627 aaKnown RBP12.84□□□□□ -0.35
SEMA4D-221ENST00000537934 MYO1FO00160 1098 aa12.83□□□□□ -0.35
SEMA4D-221ENST00000537934 RXRBP28702 533 aa12.83□□□□□ -0.35
SEMA4D-221ENST00000537934 RC3H1Q5TC82 1133 aaKnown RBP12.83□□□□□ -0.35
SEMA4D-221ENST00000537934 CCDC148Q8NFR7 591 aa12.83□□□□□ -0.35
SEMA4D-221ENST00000537934 CCDC8Q9H0W5 538 aaPredicted RBP12.83□□□□□ -0.35
SEMA4D-221ENST00000537934 ODF2LQ9ULJ1 636 aa12.83□□□□□ -0.35
SEMA4D-221ENST00000537934 BCORQ6W2J9 1755 aa12.83□□□□□ -0.36
SEMA4D-221ENST00000537934 GOLGA6CA6NDK9 693 aa12.83□□□□□ -0.36
SEMA4D-221ENST00000537934 RPS6KA4O75676 772 aa12.83□□□□□ -0.36
SEMA4D-221ENST00000537934 GOLGA6DP0CG33 693 aa12.83□□□□□ -0.36
SEMA4D-221ENST00000537934 GGCXP38435 758 aa12.83□□□□□ -0.36
SEMA4D-221ENST00000537934 TFCP2Q12800 502 aa12.83□□□□□ -0.36
SEMA4D-221ENST00000537934 MTF1Q14872 753 aa12.83□□□□□ -0.36
SEMA4D-221ENST00000537934 LRRC24Q50LG9 513 aa12.83□□□□□ -0.36
SEMA4D-221ENST00000537934 OLFM4Q6UX06 510 aa12.83□□□□□ -0.36
SEMA4D-221ENST00000537934 NOA1Q8NC60 698 aaKnown RBP12.83□□□□□ -0.36
SEMA4D-221ENST00000537934 PANX2Q96RD6 677 aa12.83□□□□□ -0.36
SEMA4D-221ENST00000537934 PLA2G12BQ9BX93 195 aa12.83□□□□□ -0.36
SEMA4D-221ENST00000537934 GOLGA6AQ9NYA3 693 aa12.83□□□□□ -0.36
SEMA4D-221ENST00000537934 GRIN2DO15399 1336 aa12.83□□□□□ -0.36
SEMA4D-221ENST00000537934 C4BP0C0L5 1744 aa12.83□□□□□ -0.36
SEMA4D-221ENST00000537934 SPTLC2O15270 562 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 PAX7P23759 505 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 CMA1P23946 247 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 BIRC2Q13490 618 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 BICDL1Q6ZP65 573 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 OTUD6BQ8N6M0 293 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 RIN2Q8WYP3 895 aaPredicted RBP12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 NAPGQ99747 312 aaPredicted RBP12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 NAA15Q9BXJ9 866 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 PUS3Q9BZE2 481 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 POLR3EQ9NVU0 708 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 KLHL33A6NCF5 533 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 SOWAHDA6NJG2 315 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 KIAA0754O94854 1291 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 POTEAQ6S8J7 498 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 ATG9AQ7Z3C6 839 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 TTLL11Q8NHH1 800 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 GREM2Q9H772 168 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 RTCBQ9Y3I0 505 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 CLIC4Q9Y696 253 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 A6NNZ2 444 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 AGPSO00116 658 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 IRF6O14896 467 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 MEFVO15553 781 aaPredicted RBP12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 CSF1RP07333 972 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 PFKFB1P16118 471 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 ARHGAP25P42331 645 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 USP14P54578 494 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 CTSWP56202 376 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 SARNPP82979 210 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 SF3B2Q13435 895 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 CCDC57Q2TAC2 916 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 TUBB8Q3ZCM7 444 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 IQCA1Q86XH1 822 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 SLC35F6Q8N357 371 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 FBXO41Q8TF61 875 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 CRACR2AQ9BSW2 395 aa12.82□□□□□ -0.36
SEMA4D-221ENST00000537934 SALL1Q9NSC2 1324 aa12.81□□□□□ -0.36
SEMA4D-221ENST00000537934 TAF5LO75529 589 aa12.81□□□□□ -0.36
SEMA4D-221ENST00000537934 GNGT1P63211 74 aa12.81□□□□□ -0.36
SEMA4D-221ENST00000537934 NAIF1Q69YI7 327 aaPredicted RBP12.81□□□□□ -0.36
SEMA4D-221ENST00000537934 ARHGEF1Q92888 912 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms