RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 MYL10Q9BUA6 226 aa13.72□□□□□ -0.21
SPARC-207ENST00000537849 DEFB129Q9H1M3 183 aa13.72□□□□□ -0.21
SPARC-207ENST00000537849 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.72□□□□□ -0.21
SPARC-207ENST00000537849 MTMR4Q9NYA4 1195 aa13.72□□□□□ -0.21
SPARC-207ENST00000537849 JAK2O60674 1132 aa13.71□□□□□ -0.21
SPARC-207ENST00000537849 GJB2P29033 226 aa13.71□□□□□ -0.21
SPARC-207ENST00000537849 GUCY1A2P33402 732 aa13.71□□□□□ -0.21
SPARC-207ENST00000537849 METAP2P50579 478 aaKnown RBP eCLIP13.71□□□□□ -0.21
SPARC-207ENST00000537849 SHROOM1Q2M3G4 852 aaPredicted RBP13.71□□□□□ -0.21
SPARC-207ENST00000537849 SIAH1Q8IUQ4 282 aa13.71□□□□□ -0.21
SPARC-207ENST00000537849 APOBEC3FQ8IUX4 373 aaKnown RBP13.71□□□□□ -0.21
SPARC-207ENST00000537849 FANCBQ8NB91 859 aa13.71□□□□□ -0.21
SPARC-207ENST00000537849 ZDHHC9Q9Y397 364 aa13.71□□□□□ -0.21
SPARC-207ENST00000537849 BAZ2BQ9UIF8 2168 aaKnown RBP13.71□□□□□ -0.22
SPARC-207ENST00000537849 GOLGA8AA7E2F4 631 aa13.7□□□□□ -0.22
SPARC-207ENST00000537849 TOP1P11387 765 aaKnown RBP13.7□□□□□ -0.22
SPARC-207ENST00000537849 FDPSP14324 419 aaKnown RBP13.7□□□□□ -0.22
SPARC-207ENST00000537849 PPP2R5BQ15173 497 aa13.7□□□□□ -0.22
SPARC-207ENST00000537849 NBPF12Q5TAG4 269 aaPredicted RBP13.7□□□□□ -0.22
SPARC-207ENST00000537849 MIGA2Q7L4E1 593 aa13.7□□□□□ -0.22
SPARC-207ENST00000537849 CATIPQ7Z7H3 387 aa13.7□□□□□ -0.22
SPARC-207ENST00000537849 MICU3Q86XE3 530 aa13.7□□□□□ -0.22
SPARC-207ENST00000537849 MAP3K14Q99558 947 aa13.7□□□□□ -0.22
SPARC-207ENST00000537849 TRIM34Q9BYJ4 488 aa13.7□□□□□ -0.22
SPARC-207ENST00000537849 SCN4AP35499 1836 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 PITPNM2Q9BZ72 1349 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 MYH4Q9Y623 1939 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 PHF20L1A8MW92 1017 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 DHX16O60231 1041 aaKnown RBP13.69□□□□□ -0.22
SPARC-207ENST00000537849 DDAH1O94760 285 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 CALM1P0DP23 149 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 CALM2P0DP24 149 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 CALM3P0DP25 149 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 PKP1Q13835 747 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 ABCB5Q2M3G0 1257 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 USP50Q70EL3 339 aaPredicted RBP13.69□□□□□ -0.22
SPARC-207ENST00000537849 CCDC144CPQ8IYA2 1237 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 PNMA1Q8ND90 353 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 NUP133Q8WUM0 1156 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 MKL1Q969V6 931 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 KAT14Q9H8E8 782 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 GGA3Q9NZ52 723 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 NYAP2Q9P242 653 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 CLIP2Q9UDT6 1046 aa13.69□□□□□ -0.22
SPARC-207ENST00000537849 PTPDC1A2A3K4 754 aa13.68□□□□□ -0.22
SPARC-207ENST00000537849 MPHOSPH10O00566 681 aaKnown RBP13.68□□□□□ -0.22
SPARC-207ENST00000537849 IFNAR1P17181 557 aa13.68□□□□□ -0.22
SPARC-207ENST00000537849 SYT1P21579 422 aa13.68□□□□□ -0.22
SPARC-207ENST00000537849 EPHX2P34913 555 aa13.68□□□□□ -0.22
SPARC-207ENST00000537849 CAP2P40123 477 aa13.68□□□□□ -0.22
SPARC-207ENST00000537849 NUCB2P80303 420 aa13.68□□□□□ -0.22
SPARC-207ENST00000537849 FUT2Q10981 343 aa13.68□□□□□ -0.22
SPARC-207ENST00000537849 SEPT2Q15019 361 aa13.68□□□□□ -0.22
SPARC-207ENST00000537849 RTN1Q16799 776 aa13.68□□□□□ -0.22
SPARC-207ENST00000537849 PRAMEF18Q5VWM3 479 aa13.68□□□□□ -0.22
SPARC-207ENST00000537849 TMEM179Q6ZVK1 233 aa13.68□□□□□ -0.22
SPARC-207ENST00000537849 NBPF11Q86T75 865 aa13.68□□□□□ -0.22
SPARC-207ENST00000537849 CLEC10AQ8IUN9 316 aa13.68□□□□□ -0.22
SPARC-207ENST00000537849 ZC3H15Q8WU90 426 aaKnown RBP13.68□□□□□ -0.22
SPARC-207ENST00000537849 DDX11Q96FC9 970 aa13.68□□□□□ -0.22
SPARC-207ENST00000537849 TAF1DQ9H5J8 278 aaPredicted RBP13.68□□□□□ -0.22
SPARC-207ENST00000537849 KANSL2Q9H9L4 492 aa13.68□□□□□ -0.22
SPARC-207ENST00000537849 STX8Q9UNK0 236 aa13.68□□□□□ -0.22
SPARC-207ENST00000537849 WDR90Q96KV7 1748 aa13.67□□□□□ -0.22
SPARC-207ENST00000537849 CCDC196A0A1B0GTZ2 297 aa13.67□□□□□ -0.22
SPARC-207ENST00000537849 GDF11O95390 407 aa13.67□□□□□ -0.22
SPARC-207ENST00000537849 BRD1O95696 1058 aa13.67□□□□□ -0.22
SPARC-207ENST00000537849 TTLL1O95922 423 aa13.67□□□□□ -0.22
SPARC-207ENST00000537849 GH2P01242 217 aa13.67□□□□□ -0.22
SPARC-207ENST00000537849 HMGN5P82970 282 aaKnown RBP13.67□□□□□ -0.22
SPARC-207ENST00000537849 GRM4Q14833 912 aa13.67□□□□□ -0.22
SPARC-207ENST00000537849 RAB3GAP1Q15042 981 aa13.67□□□□□ -0.22
SPARC-207ENST00000537849 LARP1BQ659C4 914 aaKnown RBP13.67□□□□□ -0.22
SPARC-207ENST00000537849 CABP5Q9NP86 173 aa13.67□□□□□ -0.22
SPARC-207ENST00000537849 ZNF112Q9UJU3 913 aa13.67□□□□□ -0.22
SPARC-207ENST00000537849 PPP2R3BQ9Y5P8 575 aa13.67□□□□□ -0.22
SPARC-207ENST00000537849 MYH6P13533 1939 aa13.66□□□□□ -0.22
SPARC-207ENST00000537849 PALM3A6NDB9 673 aaPredicted RBP13.66□□□□□ -0.22
SPARC-207ENST00000537849 CPLX1O14810 134 aa13.66□□□□□ -0.22
SPARC-207ENST00000537849 PPFIA3O75145 1194 aa13.66□□□□□ -0.22
SPARC-207ENST00000537849 EEF2P13639 858 aaKnown RBP13.66□□□□□ -0.22
SPARC-207ENST00000537849 PPP4R3BQ5MIZ7 849 aa13.66□□□□□ -0.22
SPARC-207ENST00000537849 CPLX2Q6PUV4 134 aaKnown RBP13.66□□□□□ -0.22
SPARC-207ENST00000537849 SRBD1Q8N5C6 995 aaKnown RBP13.66□□□□□ -0.22
SPARC-207ENST00000537849 DCPSQ96C86 337 aaKnown RBP13.66□□□□□ -0.22
SPARC-207ENST00000537849 RBM28Q9NW13 759 aaKnown RBP13.66□□□□□ -0.22
SPARC-207ENST00000537849 ORC3Q9UBD5 711 aaPredicted RBP13.66□□□□□ -0.22
SPARC-207ENST00000537849 MAD2L2Q9UI95 211 aa13.66□□□□□ -0.22
SPARC-207ENST00000537849 STX6O43752 255 aa13.65□□□□□ -0.22
SPARC-207ENST00000537849 CDKL5O76039 1030 aa13.65□□□□□ -0.22
SPARC-207ENST00000537849 PLEKHA8P1O95397 391 aa13.65□□□□□ -0.22
SPARC-207ENST00000537849 FMNL1O95466 1100 aaPredicted RBP13.65□□□□□ -0.22
SPARC-207ENST00000537849 SNHG28P0DPA3 235 aa13.65□□□□□ -0.22
SPARC-207ENST00000537849 SLC35G1Q2M3R5 365 aa13.65□□□□□ -0.22
SPARC-207ENST00000537849 DLK2Q6UY11 383 aa13.65□□□□□ -0.22
SPARC-207ENST00000537849 TMTC3Q6ZXV5 915 aa13.65□□□□□ -0.22
SPARC-207ENST00000537849 CMTR1Q8N1G2 835 aaKnown RBP13.65□□□□□ -0.22
SPARC-207ENST00000537849 STAG2Q8N3U4 1231 aa13.65□□□□□ -0.22
SPARC-207ENST00000537849 PHKBQ93100 1093 aa13.65□□□□□ -0.22
SPARC-207ENST00000537849 ZBTB21Q9ULJ3 1066 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms