RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 GPRC5AQ8NFJ5 357 aa17.21■□□□□ 0.35
RTN3P1-201ENST00000536295 PXYLP1Q8TE99 480 aa17.21■□□□□ 0.35
RTN3P1-201ENST00000536295 DDRGK1Q96HY6 314 aa17.21■□□□□ 0.35
RTN3P1-201ENST00000536295 UNC93B1Q9H1C4 597 aa17.21■□□□□ 0.35
RTN3P1-201ENST00000536295 SMIM22K7EJ46 135 aa17.2■□□□□ 0.34
RTN3P1-201ENST00000536295 AMOTL1Q8IY63 956 aa17.2■□□□□ 0.34
RTN3P1-201ENST00000536295 SHISA4Q96DD7 197 aa17.2■□□□□ 0.34
RTN3P1-201ENST00000536295 C12orf42Q96LP6 360 aa17.2■□□□□ 0.34
RTN3P1-201ENST00000536295 CRBNQ96SW2 442 aa17.2■□□□□ 0.34
RTN3P1-201ENST00000536295 KIAA1683Q9H0B3 1180 aa17.2■□□□□ 0.34
RTN3P1-201ENST00000536295 RBPJLQ9UBG7 517 aa17.2■□□□□ 0.34
RTN3P1-201ENST00000536295 SWAP70Q9UH65 585 aa17.2■□□□□ 0.34
RTN3P1-201ENST00000536295 MKI67P46013 3256 aaKnown RBP17.2■□□□□ 0.34
RTN3P1-201ENST00000536295 USP17L15C9J2P7 530 aa17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 USP17L13C9JLJ4 530 aa17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 USP17L12C9JPN9 530 aa17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 USP17L11C9JVI0 530 aa17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 USP17L21D6R901 530 aa17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 USP17L18D6R9N7 530 aa17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 USP17L22D6RA61 530 aa17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 USP17L17D6RBQ6 530 aa17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 USP17L19D6RCP7 530 aa17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 USP17L20D6RJB6 530 aa17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 GJB1P08034 283 aa17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 VCAM1P19320 739 aa17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 USP17L24Q0WX57 530 aa17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 CCAR1Q8IX12 1150 aaKnown RBP17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 KBTBD3Q8NAB2 608 aa17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 NKX2-3Q8TAU0 364 aa17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 MYH7P12883 1935 aa17.19■□□□□ 0.34
RTN3P1-201ENST00000536295 AKR1B1P15121 316 aa17.18■□□□□ 0.34
RTN3P1-201ENST00000536295 GJA8P48165 433 aa17.18■□□□□ 0.34
RTN3P1-201ENST00000536295 ERVK-9P63128 1117 aa17.18■□□□□ 0.34
RTN3P1-201ENST00000536295 ERVK-24P63145 666 aa17.18■□□□□ 0.34
RTN3P1-201ENST00000536295 Q3C1V9 767 aa17.18■□□□□ 0.34
RTN3P1-201ENST00000536295 C12orf60Q5U649 245 aa17.18■□□□□ 0.34
RTN3P1-201ENST00000536295 POTEEQ6S8J3 1075 aa17.18■□□□□ 0.34
RTN3P1-201ENST00000536295 OTUD7AQ8TE49 926 aaPredicted RBP17.18■□□□□ 0.34
RTN3P1-201ENST00000536295 GTF3C2Q8WUA4 911 aaPredicted RBP17.18■□□□□ 0.34
RTN3P1-201ENST00000536295 RPAP3Q9H6T3 665 aaPredicted RBP17.18■□□□□ 0.34
RTN3P1-201ENST00000536295 GJD2Q9UKL4 321 aa17.18■□□□□ 0.34
RTN3P1-201ENST00000536295 BAZ2AQ9UIF9 1905 aaKnown RBP17.17■□□□□ 0.34
RTN3P1-201ENST00000536295 A0A1W2PRG0 241 aa17.17■□□□□ 0.34
RTN3P1-201ENST00000536295 CDK8P49336 464 aa17.17■□□□□ 0.34
RTN3P1-201ENST00000536295 CTR9Q6PD62 1173 aa17.17■□□□□ 0.34
RTN3P1-201ENST00000536295 CATSPERGQ6ZRH7 1159 aa17.17■□□□□ 0.34
RTN3P1-201ENST00000536295 TMEM179Q6ZVK1 233 aa17.17■□□□□ 0.34
RTN3P1-201ENST00000536295 CLEC10AQ8IUN9 316 aa17.17■□□□□ 0.34
RTN3P1-201ENST00000536295 DOCK3Q8IZD9 2030 aa17.17■□□□□ 0.34
RTN3P1-201ENST00000536295 U2AF1L4Q8WU68 220 aaKnown RBP17.17■□□□□ 0.34
RTN3P1-201ENST00000536295 PORCNQ9H237 461 aa17.17■□□□□ 0.34
RTN3P1-201ENST00000536295 CWC22Q9HCG8 908 aaKnown RBP17.17■□□□□ 0.34
RTN3P1-201ENST00000536295 RNF113AO15541 343 aaKnown RBP17.16■□□□□ 0.34
RTN3P1-201ENST00000536295 CYP2B6P20813 491 aa17.16■□□□□ 0.34
RTN3P1-201ENST00000536295 MAPK4P31152 587 aa17.16■□□□□ 0.34
RTN3P1-201ENST00000536295 OSBP2Q969R2 916 aa17.16■□□□□ 0.34
RTN3P1-201ENST00000536295 DEFB118Q96PH6 123 aa17.16■□□□□ 0.34
RTN3P1-201ENST00000536295 STRBPQ96SI9 672 aaKnown RBP17.16■□□□□ 0.34
RTN3P1-201ENST00000536295 ERC2O15083 957 aa17.15■□□□□ 0.34
RTN3P1-201ENST00000536295 CNMDO75829 334 aa17.15■□□□□ 0.34
RTN3P1-201ENST00000536295 HMGCRP04035 888 aa17.15■□□□□ 0.34
RTN3P1-201ENST00000536295 ICA1Q05084 483 aa17.15■□□□□ 0.34
RTN3P1-201ENST00000536295 TRIM32Q13049 653 aa17.15■□□□□ 0.34
RTN3P1-201ENST00000536295 WDR78Q5VTH9 848 aa17.15■□□□□ 0.34
RTN3P1-201ENST00000536295 C16orf86Q6ZW13 317 aa17.15■□□□□ 0.34
RTN3P1-201ENST00000536295 GPR142Q7Z601 462 aa17.15■□□□□ 0.34
RTN3P1-201ENST00000536295 STK11IPQ8N1F8 1099 aa17.15■□□□□ 0.34
RTN3P1-201ENST00000536295 APPBP2Q92624 585 aa17.15■□□□□ 0.34
RTN3P1-201ENST00000536295 NUDT12Q9BQG2 462 aa17.15■□□□□ 0.34
RTN3P1-201ENST00000536295 TANGO6Q9C0B7 1094 aa17.15■□□□□ 0.34
RTN3P1-201ENST00000536295 RABGAP1Q9Y3P9 1069 aa17.15■□□□□ 0.34
RTN3P1-201ENST00000536295 TTC41PQ6P2S7 1318 aa17.15■□□□□ 0.34
RTN3P1-201ENST00000536295 M0R2C6 588 aa17.14■□□□□ 0.33
RTN3P1-201ENST00000536295 SGPL1O95470 568 aa17.14■□□□□ 0.33
RTN3P1-201ENST00000536295 TFRCP02786 760 aaKnown RBP17.14■□□□□ 0.33
RTN3P1-201ENST00000536295 ZFYP08048 801 aaPredicted RBP17.14■□□□□ 0.33
RTN3P1-201ENST00000536295 ATP2B2Q01814 1243 aa17.14■□□□□ 0.33
RTN3P1-201ENST00000536295 PLEKHH3Q7Z736 793 aa17.14■□□□□ 0.33
RTN3P1-201ENST00000536295 PI4K2BQ8TCG2 481 aa17.14■□□□□ 0.33
RTN3P1-201ENST00000536295 SOCS4Q8WXH5 440 aa17.14■□□□□ 0.33
RTN3P1-201ENST00000536295 TRIB2Q92519 343 aa17.14■□□□□ 0.33
RTN3P1-201ENST00000536295 CCDC17Q96LX7 622 aa17.14■□□□□ 0.33
RTN3P1-201ENST00000536295 ARHGEF10LQ9HCE6 1279 aa17.14■□□□□ 0.33
RTN3P1-201ENST00000536295 ARPP21Q9UBL0 812 aaPredicted RBP17.14■□□□□ 0.33
RTN3P1-201ENST00000536295 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.33
RTN3P1-201ENST00000536295 SPDYE16A6NNV3 312 aaPredicted RBP17.13■□□□□ 0.33
RTN3P1-201ENST00000536295 GSG1L2A8MUP6 293 aa17.13■□□□□ 0.33
RTN3P1-201ENST00000536295 MINDY4BA8MYZ0 360 aa17.13■□□□□ 0.33
RTN3P1-201ENST00000536295 GPAA1O43292 621 aa17.13■□□□□ 0.33
RTN3P1-201ENST00000536295 GLRX3O76003 335 aaKnown RBP17.13■□□□□ 0.33
RTN3P1-201ENST00000536295 FARP2O94887 1054 aaPredicted RBP17.13■□□□□ 0.33
RTN3P1-201ENST00000536295 MX1P20591 662 aa17.13■□□□□ 0.33
RTN3P1-201ENST00000536295 CCNA1P78396 465 aa17.13■□□□□ 0.33
RTN3P1-201ENST00000536295 KIAA1755Q5JYT7 1200 aa17.13■□□□□ 0.33
RTN3P1-201ENST00000536295 ANKRD45Q5TZF3 282 aa17.13■□□□□ 0.33
RTN3P1-201ENST00000536295 SIAH1Q8IUQ4 282 aa17.13■□□□□ 0.33
RTN3P1-201ENST00000536295 SPICE1Q8N0Z3 855 aa17.13■□□□□ 0.33
RTN3P1-201ENST00000536295 FSD1Q9BTV5 496 aa17.13■□□□□ 0.33
RTN3P1-201ENST00000536295 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.13■□□□□ 0.33
RTN3P1-201ENST00000536295 PAK6Q9NQU5 681 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms