RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 SH3TC2Q8TF17 1288 aa12.75□□□□□ -0.37
UBE3B-205ENST00000535900 ATAD5Q96QE3 1844 aa12.75□□□□□ -0.37
UBE3B-205ENST00000535900 DHX36Q9H2U1 1008 aaKnown RBP12.75□□□□□ -0.37
UBE3B-205ENST00000535900 EPB41L4AQ9HCS5 686 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-205ENST00000535900 LAMA4Q16363 1823 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 FOCADQ5VW36 1801 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 FLT1P17948 1338 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 ADGRA2Q96PE1 1338 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 CXCL11O14625 94 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 ST18O60284 1047 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 FMNL1O95466 1100 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-205ENST00000535900 TRDNQ13061 729 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 C17orf99Q6UX52 265 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 GADL1Q6ZQY3 521 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 TTC6Q86TZ1 520 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 TGFBRAP1Q8WUH2 860 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 SDR42E1Q8WUS8 393 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 STAG1Q8WVM7 1258 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 SNX21Q969T3 373 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 KIF2CQ99661 725 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 DDX4Q9NQI0 724 aaKnown RBP12.74□□□□□ -0.37
UBE3B-205ENST00000535900 MCM9Q9NXL9 1143 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 MGAMO43451 1857 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 PHIPQ8WWQ0 1821 aa12.74□□□□□ -0.37
UBE3B-205ENST00000535900 CENPFP49454 3210 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 MYPNQ86TC9 1320 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 WDR19Q8NEZ3 1342 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 DDTLA6NHG4 134 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-205ENST00000535900 PTPRAP18433 802 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 PSMC4P43686 418 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 MCM2P49736 904 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 PPARAQ07869 468 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 AKNAD1Q5T1N1 836 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 CTR9Q6PD62 1173 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 SH3BP5LQ7L8J4 393 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 FASTKD5Q7L8L6 764 aaKnown RBP12.73□□□□□ -0.37
UBE3B-205ENST00000535900 RASEFQ8IZ41 740 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 RAET1EQ8TD07 263 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 MTA3Q9BTC8 594 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 KRT23Q9C075 422 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 ZSWIM6Q9HCJ5 1215 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 PALD1Q9ULE6 856 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 CYP46A1Q9Y6A2 500 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 ZHX2Q9Y6X8 837 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 LOC285556D6RIA3 1793 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 BRCA2P51587 3418 aa12.73□□□□□ -0.37
UBE3B-205ENST00000535900 CDK5RAP2Q96SN8 1893 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 ROBO3Q96MS0 1386 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 A0A0G2JLL6 359 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-205ENST00000535900 TRIM75PA6NK02 468 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 PHF20L1A8MW92 1017 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 USP17L12C9JPN9 530 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 USP17L21D6R901 530 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 E7EWF7 191 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 POLR3DP05423 398 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-205ENST00000535900 HLA-DOAP06340 250 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 FGRP09769 529 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 CYP2C8P10632 490 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 OSBPP22059 807 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 HOXD10P28358 340 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 FCGRTP55899 365 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 PDE4BQ07343 736 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 MOGSQ13724 837 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 C12orf60Q5U649 245 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 BLOC1S2Q6QNY1 142 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 MFSD6Q6ZSS7 791 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 PRRT2Q7Z6L0 340 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-205ENST00000535900 RALYLQ86SE5 291 aaKnown RBP12.72□□□□□ -0.37
UBE3B-205ENST00000535900 NCOA7Q8NI08 942 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 SMCR8Q8TEV9 937 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-205ENST00000535900 TRIM47Q96LD4 638 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 JAKMIP1Q96N16 626 aaKnown RBP12.72□□□□□ -0.37
UBE3B-205ENST00000535900 NEK1Q96PY6 1258 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 OSBPL5Q9H0X9 879 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-205ENST00000535900 EHD4Q9H223 541 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 ALDH8A1Q9H2A2 487 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-205ENST00000535900 SRRDQ9UH36 339 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 NAV1Q8NEY1 1877 aa12.72□□□□□ -0.37
UBE3B-205ENST00000535900 MYH1P12882 1939 aa12.71□□□□□ -0.37
UBE3B-205ENST00000535900 BAZ2AQ9UIF9 1905 aaKnown RBP12.71□□□□□ -0.37
UBE3B-205ENST00000535900 FAM196BA6NMK8 535 aa12.71□□□□□ -0.37
UBE3B-205ENST00000535900 ORC4O43929 436 aa12.71□□□□□ -0.37
UBE3B-205ENST00000535900 CTNND1O60716 968 aaKnown RBP12.71□□□□□ -0.37
UBE3B-205ENST00000535900 SLURP2P0DP57 97 aa12.71□□□□□ -0.37
UBE3B-205ENST00000535900 CASTP20810 708 aaKnown RBP12.71□□□□□ -0.37
UBE3B-205ENST00000535900 ANKRD1Q15327 319 aa12.71□□□□□ -0.37
UBE3B-205ENST00000535900 RUFY3Q7L099 469 aa12.71□□□□□ -0.37
UBE3B-205ENST00000535900 DHX32Q7L7V1 743 aaKnown RBP12.71□□□□□ -0.37
UBE3B-205ENST00000535900 MAPKAPK5Q8IW41 473 aa12.71□□□□□ -0.37
UBE3B-205ENST00000535900 FBXL16Q8N461 479 aa12.71□□□□□ -0.37
UBE3B-205ENST00000535900 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.71□□□□□ -0.37
UBE3B-205ENST00000535900 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.71□□□□□ -0.37
UBE3B-205ENST00000535900 DAXXQ9UER7 740 aaPredicted RBP12.71□□□□□ -0.37
UBE3B-205ENST00000535900 SWAP70Q9UH65 585 aa12.71□□□□□ -0.37
UBE3B-205ENST00000535900 KIAA0100Q14667 2235 aaKnown RBP12.7□□□□□ -0.38
UBE3B-205ENST00000535900 MINDY4BA8MYZ0 360 aa12.7□□□□□ -0.38
UBE3B-205ENST00000535900 BCRP11274 1271 aa12.7□□□□□ -0.38
UBE3B-205ENST00000535900 CTGFP29279 349 aa12.7□□□□□ -0.38
UBE3B-205ENST00000535900 GRK4P32298 578 aa12.7□□□□□ -0.38
UBE3B-205ENST00000535900 MCM5P33992 734 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms