RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 GH2P01242 217 aa13.66□□□□□ -0.22
CLSTN3-206ENST00000535668 SHMT1P34896 483 aa13.66□□□□□ -0.22
CLSTN3-206ENST00000535668 CACNB2Q08289 660 aaPredicted RBP13.66□□□□□ -0.22
CLSTN3-206ENST00000535668 TRIM32Q13049 653 aa13.66□□□□□ -0.22
CLSTN3-206ENST00000535668 MAP2K5Q13163 448 aa13.66□□□□□ -0.22
CLSTN3-206ENST00000535668 PDE3AQ14432 1141 aa13.66□□□□□ -0.22
CLSTN3-206ENST00000535668 C11orf49Q9H6J7 331 aa13.66□□□□□ -0.22
CLSTN3-206ENST00000535668 TLR7Q9NYK1 1049 aaKnown RBP13.66□□□□□ -0.22
CLSTN3-206ENST00000535668 STRNO43815 780 aa13.65□□□□□ -0.22
CLSTN3-206ENST00000535668 GLRX3O76003 335 aaKnown RBP13.65□□□□□ -0.22
CLSTN3-206ENST00000535668 ZKSCAN1P17029 563 aaPredicted RBP13.65□□□□□ -0.22
CLSTN3-206ENST00000535668 GUCY1A2P33402 732 aa13.65□□□□□ -0.22
CLSTN3-206ENST00000535668 DYNLL1P63167 89 aaKnown RBP13.65□□□□□ -0.22
CLSTN3-206ENST00000535668 OS9Q13438 667 aaPredicted RBP13.65□□□□□ -0.22
CLSTN3-206ENST00000535668 GRB14Q14449 540 aa13.65□□□□□ -0.22
CLSTN3-206ENST00000535668 SHROOM1Q2M3G4 852 aaPredicted RBP13.65□□□□□ -0.22
CLSTN3-206ENST00000535668 RPAP2Q8IXW5 612 aaPredicted RBP13.65□□□□□ -0.22
CLSTN3-206ENST00000535668 FTSJ3Q8IY81 847 aaKnown RBP13.65□□□□□ -0.22
CLSTN3-206ENST00000535668 SHCBP1Q8NEM2 672 aa13.65□□□□□ -0.22
CLSTN3-206ENST00000535668 TRIM34Q9BYJ4 488 aa13.65□□□□□ -0.22
CLSTN3-206ENST00000535668 ZNF236Q9UL36 1845 aa13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 TCRBV5S4A2TA0A5A2 114 aa13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 IDH1O75874 414 aaKnown RBP13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 GDF11O95390 407 aa13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 VCAM1P19320 739 aa13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 CYP2B6P20813 491 aa13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 PTPREP23469 700 aa13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 CERKLQ49MI3 558 aaPredicted RBP13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 ABRAQ8N0Z2 381 aa13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 MAGEB6Q8N7X4 407 aa13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 EDC3Q96F86 508 aaKnown RBP13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 CCDC8Q9H0W5 538 aaPredicted RBP13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 ANTXR1Q9H6X2 564 aa13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 HOXC10Q9NYD6 342 aa13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 STAP2Q9UGK3 403 aa13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 RLFQ13129 1914 aa13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 DNAH12Q6ZR08 3092 aa13.64□□□□□ -0.23
CLSTN3-206ENST00000535668 SPDYE16A6NNV3 312 aaPredicted RBP13.63□□□□□ -0.23
CLSTN3-206ENST00000535668 SOX1O00570 391 aaPredicted RBP13.63□□□□□ -0.23
CLSTN3-206ENST00000535668 MS4A1P11836 297 aa13.63□□□□□ -0.23
CLSTN3-206ENST00000535668 PLCD1P51178 756 aa13.63□□□□□ -0.23
CLSTN3-206ENST00000535668 ABCB5Q2M3G0 1257 aa13.63□□□□□ -0.23
CLSTN3-206ENST00000535668 OLFML2BQ68BL8 750 aa13.63□□□□□ -0.23
CLSTN3-206ENST00000535668 MB21D1Q8N884 522 aa13.63□□□□□ -0.23
CLSTN3-206ENST00000535668 RHPN1Q8TCX5 695 aa13.63□□□□□ -0.23
CLSTN3-206ENST00000535668 LPAR1Q92633 364 aa13.63□□□□□ -0.23
CLSTN3-206ENST00000535668 ZBED9Q6R2W3 1325 aa13.63□□□□□ -0.23
CLSTN3-206ENST00000535668 USP5P45974 858 aa13.62□□□□□ -0.23
CLSTN3-206ENST00000535668 COG2Q14746 738 aa13.62□□□□□ -0.23
CLSTN3-206ENST00000535668 C1orf53Q5VUE5 145 aa13.62□□□□□ -0.23
CLSTN3-206ENST00000535668 FAM109BQ6ICB4 259 aaPredicted RBP13.62□□□□□ -0.23
CLSTN3-206ENST00000535668 ITPRIPQ8IWB1 547 aa13.62□□□□□ -0.23
CLSTN3-206ENST00000535668 TDHQ8IZJ6 230 aa13.62□□□□□ -0.23
CLSTN3-206ENST00000535668 MIGA1Q8NAN2 632 aa13.62□□□□□ -0.23
CLSTN3-206ENST00000535668 CABP5Q9NP86 173 aa13.62□□□□□ -0.23
CLSTN3-206ENST00000535668 ZBTB40Q9NUA8 1239 aa13.62□□□□□ -0.23
CLSTN3-206ENST00000535668 SWAP70Q9UH65 585 aa13.62□□□□□ -0.23
CLSTN3-206ENST00000535668 ADAMTS5Q9UNA0 930 aa13.62□□□□□ -0.23
CLSTN3-206ENST00000535668 LAMA2P24043 3122 aaKnown RBP13.62□□□□□ -0.23
CLSTN3-206ENST00000535668 A0A0G2JMZ2 1700 aa13.61□□□□□ -0.23
CLSTN3-206ENST00000535668 PDE6AP16499 860 aa13.61□□□□□ -0.23
CLSTN3-206ENST00000535668 CCL14Q16627 93 aa13.61□□□□□ -0.23
CLSTN3-206ENST00000535668 ACER1Q8TDN7 264 aa13.61□□□□□ -0.23
CLSTN3-206ENST00000535668 KIF1BPQ96EK5 621 aa13.61□□□□□ -0.23
CLSTN3-206ENST00000535668 CRNKL1Q9BZJ0 848 aaKnown RBP13.61□□□□□ -0.23
CLSTN3-206ENST00000535668 C1orf115Q9H7X2 142 aa13.61□□□□□ -0.23
CLSTN3-206ENST00000535668 DCP1AQ9NPI6 582 aaPredicted RBP13.61□□□□□ -0.23
CLSTN3-206ENST00000535668 BTBD7Q9P203 1132 aa13.61□□□□□ -0.23
CLSTN3-206ENST00000535668 SAP30BPQ9UHR5 308 aaKnown RBP13.61□□□□□ -0.23
CLSTN3-206ENST00000535668 NRBP1Q9UHY1 535 aa13.61□□□□□ -0.23
CLSTN3-206ENST00000535668 MAGEB6P1A0A0J9YX57 407 aa13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 A0A1W2PRG0 241 aa13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 PEX10O60683 326 aa13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 RAB11FIP3O75154 756 aa13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 CCND3P30281 292 aaPredicted RBP13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 MAGEA10P43363 369 aaPredicted RBP13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 SNX17Q15036 470 aa13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 SLC9C2Q5TAH2 1124 aa13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 MFSD14CQ5VZR4 134 aa13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 TMEM179Q6ZVK1 233 aa13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 AACSQ86V21 672 aa13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 SIAH1Q8IUQ4 282 aa13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 CLASRPQ8N2M8 674 aaKnown RBP13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 TTC28Q96AY4 2481 aa13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 CCDC17Q96LX7 622 aa13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 ATP8A2Q9NTI2 1148 aa13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 FLRT1Q9NZU1 646 aa13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 TMX2Q9Y320 296 aa13.6□□□□□ -0.23
CLSTN3-206ENST00000535668 ROBO3Q96MS0 1386 aa13.59□□□□□ -0.23
CLSTN3-206ENST00000535668 DNM1LO00429 736 aa13.59□□□□□ -0.23
CLSTN3-206ENST00000535668 CYBAP13498 195 aa13.59□□□□□ -0.23
CLSTN3-206ENST00000535668 ATP5JP18859 108 aa13.59□□□□□ -0.23
CLSTN3-206ENST00000535668 RAB3GAP1Q15042 981 aa13.59□□□□□ -0.23
CLSTN3-206ENST00000535668 CCAR1Q8IX12 1150 aaKnown RBP13.59□□□□□ -0.23
CLSTN3-206ENST00000535668 SIRT2Q8IXJ6 389 aa13.59□□□□□ -0.23
CLSTN3-206ENST00000535668 C7orf61Q8IZ16 206 aa13.59□□□□□ -0.23
CLSTN3-206ENST00000535668 MROH8Q9H579 483 aa13.59□□□□□ -0.23
CLSTN3-206ENST00000535668 DDX20Q9UHI6 824 aaKnown RBP13.59□□□□□ -0.23
CLSTN3-206ENST00000535668 EXOC6BQ9Y2D4 811 aa13.59□□□□□ -0.23
CLSTN3-206ENST00000535668 FRMPD3Q5JV73 1810 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms