RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 C12orf42Q96LP6 360 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 DEFB118Q96PH6 123 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 PAGR1Q9BTK6 254 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 ATP8A2Q9NTI2 1148 aa10.76□□□□□ -0.69
COPB1-211ENST00000534234 KIAA0100Q14667 2235 aaKnown RBP10.76□□□□□ -0.69
COPB1-211ENST00000534234 MPHOSPH10O00566 681 aaKnown RBP10.75□□□□□ -0.69
COPB1-211ENST00000534234 CHGBP05060 677 aa10.75□□□□□ -0.69
COPB1-211ENST00000534234 CYP2D6P10635 497 aa10.75□□□□□ -0.69
COPB1-211ENST00000534234 CYP2B6P20813 491 aa10.75□□□□□ -0.69
COPB1-211ENST00000534234 MAPK4P31152 587 aa10.75□□□□□ -0.69
COPB1-211ENST00000534234 GUCY1A2P33402 732 aa10.75□□□□□ -0.69
COPB1-211ENST00000534234 ERVK-9P63128 1117 aa10.75□□□□□ -0.69
COPB1-211ENST00000534234 ERVK-24P63145 666 aa10.75□□□□□ -0.69
COPB1-211ENST00000534234 SEPT2Q15019 361 aa10.75□□□□□ -0.69
COPB1-211ENST00000534234 UBE3CQ15386 1083 aa10.75□□□□□ -0.69
COPB1-211ENST00000534234 POTEEQ6S8J3 1075 aa10.75□□□□□ -0.69
COPB1-211ENST00000534234 CATSPERGQ6ZRH7 1159 aa10.75□□□□□ -0.69
COPB1-211ENST00000534234 UBE2Q1Q7Z7E8 422 aa10.75□□□□□ -0.69
COPB1-211ENST00000534234 GTF3C2Q8WUA4 911 aaPredicted RBP10.75□□□□□ -0.69
COPB1-211ENST00000534234 DCTPP1Q9H773 170 aa10.75□□□□□ -0.69
COPB1-211ENST00000534234 ECHDC1Q9NTX5 307 aa10.75□□□□□ -0.69
COPB1-211ENST00000534234 MAST2Q6P0Q8 1798 aa10.75□□□□□ -0.69
COPB1-211ENST00000534234 HMGCRP04035 888 aa10.74□□□□□ -0.69
COPB1-211ENST00000534234 CAPN2P17655 700 aa10.74□□□□□ -0.69
COPB1-211ENST00000534234 HABP4Q5JVS0 413 aaKnown RBP10.74□□□□□ -0.69
COPB1-211ENST00000534234 ZSCAN25Q6NSZ9 544 aa10.74□□□□□ -0.69
COPB1-211ENST00000534234 DYNLL2Q96FJ2 89 aa10.74□□□□□ -0.69
COPB1-211ENST00000534234 NUDT12Q9BQG2 462 aa10.74□□□□□ -0.69
COPB1-211ENST00000534234 PORCNQ9H237 461 aa10.74□□□□□ -0.69
COPB1-211ENST00000534234 PAK6Q9NQU5 681 aaPredicted RBP10.74□□□□□ -0.69
COPB1-211ENST00000534234 SWAP70Q9UH65 585 aa10.74□□□□□ -0.69
COPB1-211ENST00000534234 RABGAP1Q9Y3P9 1069 aa10.74□□□□□ -0.69
COPB1-211ENST00000534234 PHIPQ8WWQ0 1821 aa10.74□□□□□ -0.69
COPB1-211ENST00000534234 A0A1W2PRG0 241 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 USP17L12C9JPN9 530 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 USP17L21D6R901 530 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 H0YGN5 161 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 FARP2O94887 1054 aaPredicted RBP10.73□□□□□ -0.69
COPB1-211ENST00000534234 VCAM1P19320 739 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 C12orf60Q5U649 245 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 AMOTL1Q8IY63 956 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 RPTORQ8N122 1335 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 SLC44A5Q8NCS7 719 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 DDRGK1Q96HY6 314 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 HTATIP2Q9BUP3 242 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.73□□□□□ -0.69
COPB1-211ENST00000534234 PUS7LQ9H0K6 701 aaKnown RBP10.73□□□□□ -0.69
COPB1-211ENST00000534234 HMX1Q9NP08 348 aaPredicted RBP10.73□□□□□ -0.69
COPB1-211ENST00000534234 SLC4A4Q9Y6R1 1079 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 SIPA1L1O43166 1804 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 BRCA2P51587 3418 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 CYP2D7A0A087X1C5 515 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 XRCC5P13010 732 aaKnown RBP10.73□□□□□ -0.69
COPB1-211ENST00000534234 CCNA1P78396 465 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 TRIM32Q13049 653 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 TMEM179Q6ZVK1 233 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 GPR142Q7Z601 462 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 PLEKHH3Q7Z736 793 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 SOCS4Q8WXH5 440 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 TRIB2Q92519 343 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 CRISPLD2Q9H0B8 497 aa10.73□□□□□ -0.69
COPB1-211ENST00000534234 RPAP3Q9H6T3 665 aaPredicted RBP10.73□□□□□ -0.69
COPB1-211ENST00000534234 CWC22Q9HCG8 908 aaKnown RBP10.73□□□□□ -0.69
COPB1-211ENST00000534234 SMIM22K7EJ46 135 aa10.72□□□□□ -0.69
COPB1-211ENST00000534234 CNMDO75829 334 aa10.72□□□□□ -0.69
COPB1-211ENST00000534234 CDK8P49336 464 aa10.72□□□□□ -0.69
COPB1-211ENST00000534234 COG2Q14746 738 aa10.72□□□□□ -0.69
COPB1-211ENST00000534234 MORN1Q5T089 497 aa10.72□□□□□ -0.69
COPB1-211ENST00000534234 USP6NLQ92738 828 aa10.72□□□□□ -0.69
COPB1-211ENST00000534234 GPATCH3Q96I76 525 aa10.72□□□□□ -0.69
COPB1-211ENST00000534234 CCDC17Q96LX7 622 aa10.72□□□□□ -0.69
COPB1-211ENST00000534234 HOXC10Q9NYD6 342 aa10.72□□□□□ -0.69
COPB1-211ENST00000534234 COLQQ9Y215 455 aaPredicted RBP10.72□□□□□ -0.69
COPB1-211ENST00000534234 RBBP6Q7Z6E9 1792 aaKnown RBP10.72□□□□□ -0.69
COPB1-211ENST00000534234 MKI67P46013 3256 aaKnown RBP10.72□□□□□ -0.69
COPB1-211ENST00000534234 SPDYE16A6NNV3 312 aaPredicted RBP10.71□□□□□ -0.69
COPB1-211ENST00000534234 GLRX3O76003 335 aaKnown RBP10.71□□□□□ -0.69
COPB1-211ENST00000534234 AKR1B1P15121 316 aa10.71□□□□□ -0.69
COPB1-211ENST00000534234 RGS2P41220 211 aa10.71□□□□□ -0.69
COPB1-211ENST00000534234 WDR78Q5VTH9 848 aa10.71□□□□□ -0.69
COPB1-211ENST00000534234 TSHZ3Q63HK5 1081 aa10.71□□□□□ -0.69
COPB1-211ENST00000534234 CTR9Q6PD62 1173 aa10.71□□□□□ -0.69
COPB1-211ENST00000534234 LBX2Q6XYB7 198 aa10.71□□□□□ -0.69
COPB1-211ENST00000534234 SIAH1Q8IUQ4 282 aa10.71□□□□□ -0.69
COPB1-211ENST00000534234 TRMT44Q8IYL2 757 aaKnown RBP10.71□□□□□ -0.69
COPB1-211ENST00000534234 KBTBD3Q8NAB2 608 aa10.71□□□□□ -0.69
COPB1-211ENST00000534234 PAWRQ96IZ0 340 aaKnown RBP10.71□□□□□ -0.69
COPB1-211ENST00000534234 STRBPQ96SI9 672 aaKnown RBP10.71□□□□□ -0.69
COPB1-211ENST00000534234 BTBD7Q9P203 1132 aa10.71□□□□□ -0.69
COPB1-211ENST00000534234 PCDHB15Q9Y5E8 787 aa10.71□□□□□ -0.69
COPB1-211ENST00000534234 NR2E3Q9Y5X4 410 aa10.71□□□□□ -0.69
COPB1-211ENST00000534234 PTPRFP10586 1907 aa10.71□□□□□ -0.7
COPB1-211ENST00000534234 MYO5AQ9Y4I1 1855 aaKnown RBP10.71□□□□□ -0.7
COPB1-211ENST00000534234 LOC285556D6RIA3 1793 aa10.71□□□□□ -0.7
COPB1-211ENST00000534234 PRKAR2AP13861 404 aaKnown RBP10.7□□□□□ -0.7
COPB1-211ENST00000534234 ZKSCAN1P17029 563 aaPredicted RBP10.7□□□□□ -0.7
COPB1-211ENST00000534234 CACNB2Q08289 660 aaPredicted RBP10.7□□□□□ -0.7
COPB1-211ENST00000534234 MAP2K5Q13163 448 aa10.7□□□□□ -0.7
COPB1-211ENST00000534234 CCL14Q16627 93 aa10.7□□□□□ -0.7
COPB1-211ENST00000534234 MAP3K21Q5TCX8 1036 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms