RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 USP17L24Q0WX57 530 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 CTR9Q6PD62 1173 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 CHD1LQ86WJ1 897 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 EXOC6Q8TAG9 804 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 RAET1EQ8TD07 263 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 LPAR1Q92633 364 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 TRIM47Q96LD4 638 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 MORF4L1Q9UBU8 362 aa18.49■□□□□ 0.55
UBXN1-217ENST00000534176 ROBO3Q96MS0 1386 aa18.48■□□□□ 0.55
UBXN1-217ENST00000534176 TDO2P48775 406 aa18.48■□□□□ 0.55
UBXN1-217ENST00000534176 CDK8P49336 464 aa18.48■□□□□ 0.55
UBXN1-217ENST00000534176 ZMYM1Q5SVZ6 1142 aa18.48■□□□□ 0.55
UBXN1-217ENST00000534176 TMEM106CQ9BVX2 250 aa18.48■□□□□ 0.55
UBXN1-217ENST00000534176 OSBPL3Q9H4L5 887 aa18.48■□□□□ 0.55
UBXN1-217ENST00000534176 KANSL2Q9H9L4 492 aa18.48■□□□□ 0.55
UBXN1-217ENST00000534176 MYPNQ86TC9 1320 aa18.48■□□□□ 0.55
UBXN1-217ENST00000534176 GSG1L2A8MUP6 293 aa18.47■□□□□ 0.55
UBXN1-217ENST00000534176 TNPO2O14787 897 aaKnown RBP18.47■□□□□ 0.55
UBXN1-217ENST00000534176 APPP05067 770 aa18.47■□□□□ 0.55
UBXN1-217ENST00000534176 JAG1P78504 1218 aa18.47■□□□□ 0.55
UBXN1-217ENST00000534176 PPP4R3BQ5MIZ7 849 aa18.47■□□□□ 0.55
UBXN1-217ENST00000534176 ANKRD13CQ8N6S4 541 aa18.47■□□□□ 0.55
UBXN1-217ENST00000534176 SLAIN1Q8ND83 568 aa18.47■□□□□ 0.55
UBXN1-217ENST00000534176 OTUD7AQ8TE49 926 aaPredicted RBP18.47■□□□□ 0.55
UBXN1-217ENST00000534176 HELLSQ9NRZ9 838 aa18.47■□□□□ 0.55
UBXN1-217ENST00000534176 EMILIN3Q9NT22 766 aa18.47■□□□□ 0.55
UBXN1-217ENST00000534176 PTCH2Q9Y6C5 1203 aa18.47■□□□□ 0.55
UBXN1-217ENST00000534176 MYH8P13535 1937 aa18.47■□□□□ 0.55
UBXN1-217ENST00000534176 MFAP1P55081 439 aaKnown RBP18.46■□□□□ 0.55
UBXN1-217ENST00000534176 HERVK_113P62684 666 aa18.46■□□□□ 0.55
UBXN1-217ENST00000534176 CCNA1P78396 465 aa18.46■□□□□ 0.55
UBXN1-217ENST00000534176 IRF5Q13568 498 aa18.46■□□□□ 0.55
UBXN1-217ENST00000534176 LBX2Q6XYB7 198 aa18.46■□□□□ 0.55
UBXN1-217ENST00000534176 GPRC5AQ8NFJ5 357 aa18.46■□□□□ 0.55
UBXN1-217ENST00000534176 ZNF333Q96JL9 665 aa18.46■□□□□ 0.55
UBXN1-217ENST00000534176 LNPKQ9C0E8 428 aa18.46■□□□□ 0.55
UBXN1-217ENST00000534176 ARHGAP39Q9C0H5 1083 aa18.46■□□□□ 0.55
UBXN1-217ENST00000534176 MKNK2Q9HBH9 465 aa18.46■□□□□ 0.55
UBXN1-217ENST00000534176 BAZ2AQ9UIF9 1905 aaKnown RBP18.45■□□□□ 0.54
UBXN1-217ENST00000534176 MAPK4P31152 587 aa18.45■□□□□ 0.54
UBXN1-217ENST00000534176 UBXN2AP68543 259 aa18.45■□□□□ 0.54
UBXN1-217ENST00000534176 ICA1Q05084 483 aa18.45■□□□□ 0.54
UBXN1-217ENST00000534176 PDE4BQ07343 736 aa18.45■□□□□ 0.54
UBXN1-217ENST00000534176 SEPT2Q15019 361 aa18.45■□□□□ 0.54
UBXN1-217ENST00000534176 SLFNL1Q499Z3 407 aa18.45■□□□□ 0.54
UBXN1-217ENST00000534176 CCAR1Q8IX12 1150 aaKnown RBP18.45■□□□□ 0.54
UBXN1-217ENST00000534176 PXYLP1Q8TE99 480 aa18.45■□□□□ 0.54
UBXN1-217ENST00000534176 NAPBQ9H115 298 aa18.45■□□□□ 0.54
UBXN1-217ENST00000534176 HOXC10Q9NYD6 342 aa18.45■□□□□ 0.54
UBXN1-217ENST00000534176 SYNPO2Q9UMS6 1093 aa18.45■□□□□ 0.54
UBXN1-217ENST00000534176 HIP1O00291 1037 aa18.44■□□□□ 0.54
UBXN1-217ENST00000534176 CYP2D6P10635 497 aa18.44■□□□□ 0.54
UBXN1-217ENST00000534176 VCAM1P19320 739 aa18.44■□□□□ 0.54
UBXN1-217ENST00000534176 GRK4P32298 578 aa18.44■□□□□ 0.54
UBXN1-217ENST00000534176 CATSPERGQ6ZRH7 1159 aa18.44■□□□□ 0.54
UBXN1-217ENST00000534176 IFNL3Q8IZI9 196 aa18.44■□□□□ 0.54
UBXN1-217ENST00000534176 DYNLL2Q96FJ2 89 aa18.44■□□□□ 0.54
UBXN1-217ENST00000534176 TMX2Q9Y320 296 aa18.44■□□□□ 0.54
UBXN1-217ENST00000534176 RABGAP1Q9Y3P9 1069 aa18.44■□□□□ 0.54
UBXN1-217ENST00000534176 MGAMO43451 1857 aa18.43■□□□□ 0.54
UBXN1-217ENST00000534176 MINDY4BA8MYZ0 360 aa18.43■□□□□ 0.54
UBXN1-217ENST00000534176 M0R2C6 588 aa18.43■□□□□ 0.54
UBXN1-217ENST00000534176 IGHDP01880 384 aa18.43■□□□□ 0.54
UBXN1-217ENST00000534176 CHGBP05060 677 aa18.43■□□□□ 0.54
UBXN1-217ENST00000534176 GUCY1A2P33402 732 aa18.43■□□□□ 0.54
UBXN1-217ENST00000534176 SOX10P56693 466 aa18.43■□□□□ 0.54
UBXN1-217ENST00000534176 B4GALNT3Q6L9W6 998 aa18.43■□□□□ 0.54
UBXN1-217ENST00000534176 ZNF444Q8N0Y2 327 aaPredicted RBP18.43■□□□□ 0.54
UBXN1-217ENST00000534176 MB21D1Q8N884 522 aa18.43■□□□□ 0.54
UBXN1-217ENST00000534176 SLC44A5Q8NCS7 719 aa18.43■□□□□ 0.54
UBXN1-217ENST00000534176 NKX2-3Q8TAU0 364 aa18.43■□□□□ 0.54
UBXN1-217ENST00000534176 SOCS4Q8WXH5 440 aa18.43■□□□□ 0.54
UBXN1-217ENST00000534176 P2RX7Q99572 595 aaKnown RBP18.43■□□□□ 0.54
UBXN1-217ENST00000534176 GOPCQ9HD26 462 aa18.43■□□□□ 0.54
UBXN1-217ENST00000534176 RBBP6Q7Z6E9 1792 aaKnown RBP18.42■□□□□ 0.54
UBXN1-217ENST00000534176 TRIM6-TRIM34B2RNG4 842 aa18.42■□□□□ 0.54
UBXN1-217ENST00000534176 NT5C2P49902 561 aa18.42■□□□□ 0.54
UBXN1-217ENST00000534176 CAP1Q01518 475 aa18.42■□□□□ 0.54
UBXN1-217ENST00000534176 PRKCZQ05513 592 aa18.42■□□□□ 0.54
UBXN1-217ENST00000534176 SHROOM1Q2M3G4 852 aaPredicted RBP18.42■□□□□ 0.54
UBXN1-217ENST00000534176 MCMDC2Q4G0Z9 681 aa18.42■□□□□ 0.54
UBXN1-217ENST00000534176 TRMT44Q8IYL2 757 aaKnown RBP18.42■□□□□ 0.54
UBXN1-217ENST00000534176 WDR46O15213 610 aaKnown RBP18.41■□□□□ 0.54
UBXN1-217ENST00000534176 AKR1B1P15121 316 aa18.41■□□□□ 0.54
UBXN1-217ENST00000534176 CTGFP29279 349 aa18.41■□□□□ 0.54
UBXN1-217ENST00000534176 FLT3LGP49771 235 aa18.41■□□□□ 0.54
UBXN1-217ENST00000534176 ERVK-9P63128 1117 aa18.41■□□□□ 0.54
UBXN1-217ENST00000534176 ERVK-24P63145 666 aa18.41■□□□□ 0.54
UBXN1-217ENST00000534176 COG2Q14746 738 aa18.41■□□□□ 0.54
UBXN1-217ENST00000534176 ZYXQ15942 572 aaKnown RBP18.41■□□□□ 0.54
UBXN1-217ENST00000534176 PLEKHM2Q8IWE5 1019 aa18.41■□□□□ 0.54
UBXN1-217ENST00000534176 ACER1Q8TDN7 264 aa18.41■□□□□ 0.54
UBXN1-217ENST00000534176 RPAP3Q9H6T3 665 aaPredicted RBP18.41■□□□□ 0.54
UBXN1-217ENST00000534176 VCPKMTQ9H867 229 aa18.41■□□□□ 0.54
UBXN1-217ENST00000534176 ZMYM6O95789 1325 aa18.41■□□□□ 0.54
UBXN1-217ENST00000534176 CYP2D7A0A087X1C5 515 aa18.4■□□□□ 0.54
UBXN1-217ENST00000534176 ALX1Q15699 326 aa18.4■□□□□ 0.54
UBXN1-217ENST00000534176 EPB41L4AQ9HCS5 686 aaPredicted RBP18.4■□□□□ 0.54
UBXN1-217ENST00000534176 NYAP2Q9P242 653 aa18.4■□□□□ 0.54
UBXN1-217ENST00000534176 ADCY3O60266 1144 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms