RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 RIN3Q8TB24 985 aa6.64□□□□□ -1.35
ITGB1-219ENST00000534049 HSPA12BQ96MM6 686 aa6.64□□□□□ -1.35
ITGB1-219ENST00000534049 SEMA3GQ9NS98 782 aa6.64□□□□□ -1.35
ITGB1-219ENST00000534049 REV1Q9UBZ9 1251 aa6.64□□□□□ -1.35
ITGB1-219ENST00000534049 CORINQ9Y5Q5 1042 aa6.64□□□□□ -1.35
ITGB1-219ENST00000534049 ST14Q9Y5Y6 855 aa6.64□□□□□ -1.35
ITGB1-219ENST00000534049 PRR33A8MZF0 331 aa6.63□□□□□ -1.35
ITGB1-219ENST00000534049 F6X3S4 739 aa6.63□□□□□ -1.35
ITGB1-219ENST00000534049 PAPLNO95428 1278 aa6.63□□□□□ -1.35
ITGB1-219ENST00000534049 ZNF16P17020 682 aaPredicted RBP6.63□□□□□ -1.35
ITGB1-219ENST00000534049 MFAP1P55081 439 aaKnown RBP6.63□□□□□ -1.35
ITGB1-219ENST00000534049 LRRN4CLQ8ND94 238 aa6.63□□□□□ -1.35
ITGB1-219ENST00000534049 RNF141Q8WVD5 230 aa6.63□□□□□ -1.35
ITGB1-219ENST00000534049 CCDC74BQ96LY2 380 aa6.63□□□□□ -1.35
ITGB1-219ENST00000534049 GOLGA2P5Q9HBQ8 144 aa6.63□□□□□ -1.35
ITGB1-219ENST00000534049 ADAMTS6Q9UKP5 1117 aa6.63□□□□□ -1.35
ITGB1-219ENST00000534049 H3BS24 57 aa6.62□□□□□ -1.35
ITGB1-219ENST00000534049 GREM1O60565 184 aa6.62□□□□□ -1.35
ITGB1-219ENST00000534049 GARTP22102 1010 aa6.62□□□□□ -1.35
ITGB1-219ENST00000534049 TNNI2P48788 182 aa6.62□□□□□ -1.35
ITGB1-219ENST00000534049 TNK2Q07912 1038 aa6.62□□□□□ -1.35
ITGB1-219ENST00000534049 ASPNQ9BXN1 380 aa6.62□□□□□ -1.35
ITGB1-219ENST00000534049 ATP13A1Q9HD20 1204 aa6.62□□□□□ -1.35
ITGB1-219ENST00000534049 METTL5Q9NRN9 209 aaKnown RBP6.62□□□□□ -1.35
ITGB1-219ENST00000534049 GPATCH2Q9NW75 528 aa6.62□□□□□ -1.35
ITGB1-219ENST00000534049 MYO15BQ96JP2 1530 aa6.61□□□□□ -1.35
ITGB1-219ENST00000534049 ATE1O95260 518 aa6.61□□□□□ -1.35
ITGB1-219ENST00000534049 AFMP43652 599 aa6.61□□□□□ -1.35
ITGB1-219ENST00000534049 FBXL19Q6PCT2 694 aa6.61□□□□□ -1.35
ITGB1-219ENST00000534049 REXO1Q8N1G1 1221 aaKnown RBP6.61□□□□□ -1.35
ITGB1-219ENST00000534049 TMEM87AQ8NBN3 555 aa6.61□□□□□ -1.35
ITGB1-219ENST00000534049 ZNF296Q8WUU4 475 aaPredicted RBP6.61□□□□□ -1.35
ITGB1-219ENST00000534049 TMEM40Q8WWA1 233 aa6.61□□□□□ -1.35
ITGB1-219ENST00000534049 CARS2Q9HA77 564 aaKnown RBP6.61□□□□□ -1.35
ITGB1-219ENST00000534049 KLHL3Q9UH77 587 aa6.61□□□□□ -1.35
ITGB1-219ENST00000534049 POLR3KQ9Y2Y1 108 aaPredicted RBP6.61□□□□□ -1.35
ITGB1-219ENST00000534049 RBM47A0AV96 593 aaKnown RBP6.6□□□□□ -1.35
ITGB1-219ENST00000534049 GRIN3BO60391 1043 aa6.6□□□□□ -1.35
ITGB1-219ENST00000534049 RNF4P78317 190 aa6.6□□□□□ -1.35
ITGB1-219ENST00000534049 PHACTR4Q8IZ21 702 aa6.6□□□□□ -1.35
ITGB1-219ENST00000534049 PPP1R13LQ8WUF5 828 aa6.6□□□□□ -1.35
ITGB1-219ENST00000534049 FAM168AQ92567 244 aa6.6□□□□□ -1.35
ITGB1-219ENST00000534049 UBE2FQ969M7 185 aa6.6□□□□□ -1.35
ITGB1-219ENST00000534049 GPR62Q9BZJ7 368 aa6.6□□□□□ -1.35
ITGB1-219ENST00000534049 COPRSQ9NQ92 184 aa6.6□□□□□ -1.35
ITGB1-219ENST00000534049 FAM53CQ9NYF3 392 aa6.6□□□□□ -1.35
ITGB1-219ENST00000534049 GMIPQ9P107 970 aa6.6□□□□□ -1.35
ITGB1-219ENST00000534049 ZSWIM5Q9P217 1185 aa6.6□□□□□ -1.35
ITGB1-219ENST00000534049 CNTNAP4Q9C0A0 1308 aa6.59□□□□□ -1.35
ITGB1-219ENST00000534049 UPK3BL1B0FP48 263 aa6.59□□□□□ -1.35
ITGB1-219ENST00000534049 UPK3BL2E5RIL1 263 aa6.59□□□□□ -1.35
ITGB1-219ENST00000534049 YBX3P16989 372 aaKnown RBP eCLIP6.59□□□□□ -1.353e-18■■□□□ 12
ITGB1-219ENST00000534049 ZNF76P36508 570 aa6.59□□□□□ -1.35
ITGB1-219ENST00000534049 GDNFP39905 211 aa6.59□□□□□ -1.35
ITGB1-219ENST00000534049 ZNF165P49910 485 aa6.59□□□□□ -1.35
ITGB1-219ENST00000534049 RAD51AP2Q09MP3 1159 aa6.59□□□□□ -1.35
ITGB1-219ENST00000534049 APOBRQ0VD83 1088 aa6.59□□□□□ -1.35
ITGB1-219ENST00000534049 LRRFIP1Q32MZ4 808 aaKnown RBP6.59□□□□□ -1.35
ITGB1-219ENST00000534049 POU5F2Q8N7G0 328 aa6.59□□□□□ -1.35
ITGB1-219ENST00000534049 ALPK1Q96QP1 1244 aa6.59□□□□□ -1.35
ITGB1-219ENST00000534049 NT5C1AQ9BXI3 368 aa6.59□□□□□ -1.35
ITGB1-219ENST00000534049 KRTAP9-2Q9BYQ4 174 aa6.59□□□□□ -1.35
ITGB1-219ENST00000534049 EHMT1Q9H9B1 1298 aa6.59□□□□□ -1.35
ITGB1-219ENST00000534049 TLR3O15455 904 aaKnown RBP6.58□□□□□ -1.36
ITGB1-219ENST00000534049 VAMP1P23763 118 aa6.58□□□□□ -1.36
ITGB1-219ENST00000534049 GBP1P32455 592 aa6.58□□□□□ -1.36
ITGB1-219ENST00000534049 CCNFP41002 786 aa6.58□□□□□ -1.36
ITGB1-219ENST00000534049 ZSWIM9Q86XI8 627 aa6.58□□□□□ -1.36
ITGB1-219ENST00000534049 DTWD2Q8NBA8 298 aa6.58□□□□□ -1.36
ITGB1-219ENST00000534049 FBXO27Q8NI29 283 aa6.58□□□□□ -1.36
ITGB1-219ENST00000534049 SYTL4Q96C24 671 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-219ENST00000534049 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.58□□□□□ -1.361e-8■■■■□ 23.7
ITGB1-219ENST00000534049 CTNND2Q9UQB3 1225 aa6.58□□□□□ -1.36
ITGB1-219ENST00000534049 PCDHB14Q9Y5E9 798 aa6.58□□□□□ -1.36
ITGB1-219ENST00000534049 ZCCHC6Q5VYS8 1495 aaKnown RBP6.58□□□□□ -1.36
ITGB1-219ENST00000534049 RGS13O14921 159 aa6.57□□□□□ -1.36
ITGB1-219ENST00000534049 SRFP11831 508 aa6.57□□□□□ -1.36
ITGB1-219ENST00000534049 RAC2P15153 192 aa6.57□□□□□ -1.36
ITGB1-219ENST00000534049 RAG1P15918 1043 aa6.57□□□□□ -1.36
ITGB1-219ENST00000534049 KCNMB1Q16558 191 aa6.57□□□□□ -1.36
ITGB1-219ENST00000534049 KIAA0825Q8IV33 1275 aa6.57□□□□□ -1.36
ITGB1-219ENST00000534049 Q96M66 194 aa6.57□□□□□ -1.36
ITGB1-219ENST00000534049 KREMEN1Q96MU8 473 aa6.57□□□□□ -1.36
ITGB1-219ENST00000534049 ASCC2Q9H1I8 757 aaPredicted RBP6.57□□□□□ -1.36
ITGB1-219ENST00000534049 BRMS1Q9HCU9 246 aa6.57□□□□□ -1.36
ITGB1-219ENST00000534049 PRDM7Q9NQW5 492 aa6.57□□□□□ -1.36
ITGB1-219ENST00000534049 ADAMTS1Q9UHI8 967 aa6.57□□□□□ -1.36
ITGB1-219ENST00000534049 UNC13AQ9UPW8 1703 aa6.56□□□□□ -1.36
ITGB1-219ENST00000534049 CHURC1-FNTBB4DL54 471 aa6.56□□□□□ -1.36
ITGB1-219ENST00000534049 IMPDH2P12268 514 aa6.56□□□□□ -1.36
ITGB1-219ENST00000534049 TPP2P29144 1249 aaPredicted RBP6.56□□□□□ -1.36
ITGB1-219ENST00000534049 GAB4Q2WGN9 574 aa6.56□□□□□ -1.36
ITGB1-219ENST00000534049 CDCP2Q5VXM1 449 aa6.56□□□□□ -1.36
ITGB1-219ENST00000534049 OGFOD2Q6N063 350 aa6.56□□□□□ -1.36
ITGB1-219ENST00000534049 TSPYL5Q86VY4 417 aaPredicted RBP6.56□□□□□ -1.36
ITGB1-219ENST00000534049 ENOX1Q8TC92 643 aaKnown RBP6.56□□□□□ -1.36
ITGB1-219ENST00000534049 SPON2Q9BUD6 331 aa6.56□□□□□ -1.36
ITGB1-219ENST00000534049 BACH2Q9BYV9 841 aa6.56□□□□□ -1.36
ITGB1-219ENST00000534049 DUSP15Q9H1R2 295 aaPredicted RBP6.56□□□□□ -1.36
ITGB1-219ENST00000534049 DUSP13Q9UII6 198 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms