RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 CWC22Q9HCG8 908 aaKnown RBP20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 IL1RAPL2Q9NP60 686 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 CABP5Q9NP86 173 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 RABGAP1Q9Y3P9 1069 aa20.5■□□□□ 0.87
CAPRIN1-216ENST00000534042 RGS2P41220 211 aa20.49■□□□□ 0.87
CAPRIN1-216ENST00000534042 TTF1Q15361 905 aaPredicted RBP20.49■□□□□ 0.87
CAPRIN1-216ENST00000534042 USP6NLQ92738 828 aa20.49■□□□□ 0.87
CAPRIN1-216ENST00000534042 STAP2Q9UGK3 403 aa20.49■□□□□ 0.87
CAPRIN1-216ENST00000534042 OGDHLQ9ULD0 1010 aa20.49■□□□□ 0.87
CAPRIN1-216ENST00000534042 MAGEB6P1A0A0J9YX57 407 aa20.48■□□□□ 0.87
CAPRIN1-216ENST00000534042 POLR3DP05423 398 aaPredicted RBP20.48■□□□□ 0.87
CAPRIN1-216ENST00000534042 MNX1P50219 401 aaPredicted RBP20.48■□□□□ 0.87
CAPRIN1-216ENST00000534042 CCNA1P78396 465 aa20.48■□□□□ 0.87
CAPRIN1-216ENST00000534042 MORN1Q5T089 497 aa20.48■□□□□ 0.87
CAPRIN1-216ENST00000534042 POTEEQ6S8J3 1075 aa20.48■□□□□ 0.87
CAPRIN1-216ENST00000534042 C7orf61Q8IZ16 206 aa20.48■□□□□ 0.87
CAPRIN1-216ENST00000534042 RHPN1Q8TCX5 695 aa20.48■□□□□ 0.87
CAPRIN1-216ENST00000534042 RIOK1Q9BRS2 568 aaKnown RBP20.48■□□□□ 0.87
CAPRIN1-216ENST00000534042 KIAA1683Q9H0B3 1180 aa20.48■□□□□ 0.87
CAPRIN1-216ENST00000534042 C11orf49Q9H6J7 331 aa20.48■□□□□ 0.87
CAPRIN1-216ENST00000534042 DDX60LQ5H9U9 1706 aaKnown RBP20.47■□□□□ 0.87
CAPRIN1-216ENST00000534042 GLRX3O76003 335 aaKnown RBP20.47■□□□□ 0.87
CAPRIN1-216ENST00000534042 PLCD1P51178 756 aa20.47■□□□□ 0.87
CAPRIN1-216ENST00000534042 CACNB2Q08289 660 aaPredicted RBP20.47■□□□□ 0.87
CAPRIN1-216ENST00000534042 CATSPERGQ6ZRH7 1159 aa20.47■□□□□ 0.87
CAPRIN1-216ENST00000534042 ACER1Q8TDN7 264 aa20.47■□□□□ 0.87
CAPRIN1-216ENST00000534042 APBA2Q99767 749 aa20.47■□□□□ 0.87
CAPRIN1-216ENST00000534042 CRNKL1Q9BZJ0 848 aaKnown RBP20.47■□□□□ 0.87
CAPRIN1-216ENST00000534042 MS4A1P11836 297 aa20.46■□□□□ 0.87
CAPRIN1-216ENST00000534042 PDE6AP16499 860 aa20.46■□□□□ 0.87
CAPRIN1-216ENST00000534042 VCAM1P19320 739 aa20.46■□□□□ 0.87
CAPRIN1-216ENST00000534042 SHMT1P34896 483 aa20.46■□□□□ 0.87
CAPRIN1-216ENST00000534042 CCL14Q16627 93 aa20.46■□□□□ 0.87
CAPRIN1-216ENST00000534042 SLC9C2Q5TAH2 1124 aa20.46■□□□□ 0.87
CAPRIN1-216ENST00000534042 CLASRPQ8N2M8 674 aaKnown RBP20.46■□□□□ 0.87
CAPRIN1-216ENST00000534042 ZMYND8Q9ULU4 1186 aaPredicted RBP20.46■□□□□ 0.87
CAPRIN1-216ENST00000534042 RANBP2P49792 3224 aaKnown RBP20.45■□□□□ 0.86
CAPRIN1-216ENST00000534042 CNMDO75829 334 aa20.45■□□□□ 0.86
CAPRIN1-216ENST00000534042 MAP2K5Q13163 448 aa20.45■□□□□ 0.86
CAPRIN1-216ENST00000534042 WDR78Q5VTH9 848 aa20.45■□□□□ 0.86
CAPRIN1-216ENST00000534042 KIF1BPQ96EK5 621 aa20.45■□□□□ 0.86
CAPRIN1-216ENST00000534042 ZBED9Q6R2W3 1325 aa20.45■□□□□ 0.86
CAPRIN1-216ENST00000534042 NAV1Q8NEY1 1877 aa20.45■□□□□ 0.86
CAPRIN1-216ENST00000534042 APBB1O00213 710 aa20.44■□□□□ 0.86
CAPRIN1-216ENST00000534042 HMMRO75330 724 aa20.44■□□□□ 0.86
CAPRIN1-216ENST00000534042 CCND3P30281 292 aaPredicted RBP20.44■□□□□ 0.86
CAPRIN1-216ENST00000534042 RPAP2Q8IXW5 612 aaPredicted RBP20.44■□□□□ 0.86
CAPRIN1-216ENST00000534042 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.44■□□□□ 0.86
CAPRIN1-216ENST00000534042 EDC3Q96F86 508 aaKnown RBP20.44■□□□□ 0.86
CAPRIN1-216ENST00000534042 DNAJC2Q99543 621 aaKnown RBP20.44■□□□□ 0.86
CAPRIN1-216ENST00000534042 GDF15Q99988 308 aa20.44■□□□□ 0.86
CAPRIN1-216ENST00000534042 MCM9Q9NXL9 1143 aa20.44■□□□□ 0.86
CAPRIN1-216ENST00000534042 GOLIM4O00461 696 aa20.43■□□□□ 0.86
CAPRIN1-216ENST00000534042 IFIT2P09913 472 aaKnown RBP20.43■□□□□ 0.86
CAPRIN1-216ENST00000534042 GUCY1A2P33402 732 aa20.43■□□□□ 0.86
CAPRIN1-216ENST00000534042 BMP8BP34820 402 aa20.43■□□□□ 0.86
CAPRIN1-216ENST00000534042 GABPAQ06546 454 aa20.43■□□□□ 0.86
CAPRIN1-216ENST00000534042 SEPT2Q15019 361 aa20.43■□□□□ 0.86
CAPRIN1-216ENST00000534042 LBX2Q6XYB7 198 aa20.43■□□□□ 0.86
CAPRIN1-216ENST00000534042 BCL11AQ9H165 835 aa20.43■□□□□ 0.86
CAPRIN1-216ENST00000534042 RPAP3Q9H6T3 665 aaPredicted RBP20.43■□□□□ 0.86
CAPRIN1-216ENST00000534042 IVNS1ABPQ9Y6Y0 642 aa20.43■□□□□ 0.86
CAPRIN1-216ENST00000534042 ZNF532Q9HCE3 1301 aa20.43■□□□□ 0.86
CAPRIN1-216ENST00000534042 SLC15A5A6NIM6 579 aa20.42■□□□□ 0.86
CAPRIN1-216ENST00000534042 MPHOSPH10O00566 681 aaKnown RBP20.42■□□□□ 0.86
CAPRIN1-216ENST00000534042 PTPREP23469 700 aa20.42■□□□□ 0.86
CAPRIN1-216ENST00000534042 MFSD14CQ5VZR4 134 aa20.42■□□□□ 0.86
CAPRIN1-216ENST00000534042 BTBD7Q9P203 1132 aa20.42■□□□□ 0.86
CAPRIN1-216ENST00000534042 SPDYE16A6NNV3 312 aaPredicted RBP20.41■□□□□ 0.86
CAPRIN1-216ENST00000534042 SOX1O00570 391 aaPredicted RBP20.41■□□□□ 0.86
CAPRIN1-216ENST00000534042 SYN1P17600 705 aa20.41■□□□□ 0.86
CAPRIN1-216ENST00000534042 DIEXFQ68CQ4 756 aaKnown RBP20.41■□□□□ 0.86
CAPRIN1-216ENST00000534042 LHX8Q68G74 356 aa20.41■□□□□ 0.86
CAPRIN1-216ENST00000534042 SDR42E1Q8WUS8 393 aa20.41■□□□□ 0.86
CAPRIN1-216ENST00000534042 DDX19BQ9UMR2 479 aa20.41■□□□□ 0.86
CAPRIN1-216ENST00000534042 PFASO15067 1338 aa20.41■□□□□ 0.86
CAPRIN1-216ENST00000534042 TCRBV5S4A2TA0A5A2 114 aa20.4■□□□□ 0.86
CAPRIN1-216ENST00000534042 COL6A1P12109 1028 aa20.4■□□□□ 0.86
CAPRIN1-216ENST00000534042 LCORLQ8N3X6 602 aa20.4■□□□□ 0.86
CAPRIN1-216ENST00000534042 DCP1AQ9NPI6 582 aaPredicted RBP20.4■□□□□ 0.86
CAPRIN1-216ENST00000534042 MYH8P13535 1937 aa20.39■□□□□ 0.86
CAPRIN1-216ENST00000534042 RAB11FIP3O75154 756 aa20.39■□□□□ 0.85
CAPRIN1-216ENST00000534042 ATP2B2Q01814 1243 aa20.39■□□□□ 0.85
CAPRIN1-216ENST00000534042 EVX2Q03828 476 aa20.39■□□□□ 0.85
CAPRIN1-216ENST00000534042 COG2Q14746 738 aa20.39■□□□□ 0.85
CAPRIN1-216ENST00000534042 LRCH3Q96II8 777 aa20.39■□□□□ 0.85
CAPRIN1-216ENST00000534042 HOXC10Q9NYD6 342 aa20.39■□□□□ 0.85
CAPRIN1-216ENST00000534042 FLRT1Q9NZU1 646 aa20.39■□□□□ 0.85
CAPRIN1-216ENST00000534042 COG6Q9Y2V7 657 aa20.39■□□□□ 0.85
CAPRIN1-216ENST00000534042 A0A1W2PRG0 241 aa20.38■□□□□ 0.85
CAPRIN1-216ENST00000534042 HOXC6P09630 235 aa20.38■□□□□ 0.85
CAPRIN1-216ENST00000534042 CYP2D6P10635 497 aa20.38■□□□□ 0.85
CAPRIN1-216ENST00000534042 MAGEA10P43363 369 aaPredicted RBP20.38■□□□□ 0.85
CAPRIN1-216ENST00000534042 GRB14Q14449 540 aa20.38■□□□□ 0.85
CAPRIN1-216ENST00000534042 TMEM179Q6ZVK1 233 aa20.38■□□□□ 0.85
CAPRIN1-216ENST00000534042 SIRT2Q8IXJ6 389 aa20.38■□□□□ 0.85
CAPRIN1-216ENST00000534042 TANGO6Q9C0B7 1094 aa20.38■□□□□ 0.85
CAPRIN1-216ENST00000534042 ARMT1Q9H993 441 aa20.38■□□□□ 0.85
CAPRIN1-216ENST00000534042 ZBTB40Q9NUA8 1239 aa20.38■□□□□ 0.85
CAPRIN1-216ENST00000534042 PAG1Q9NWQ8 432 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms