RNA–Protein interactions for RNA: ENST00000533860.5

APLP2-222, Transcript of amyloid beta precursor like protein 2, human

TSL 1 (best)

Gene APLP2, Length 1,424 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APLP2-222	ENST00000533860	CERKL	Q49MI3	558 aa	Predicted RBP	18.32	■□□□□ 0.52
APLP2-222	ENST00000533860	MIGA2	Q7L4E1	593 aa		18.32	■□□□□ 0.52
APLP2-222	ENST00000533860	RASGRP2	Q7LDG7	609 aa		18.32	■□□□□ 0.52
APLP2-222	ENST00000533860	NUP133	Q8WUM0	1156 aa		18.32	■□□□□ 0.52
APLP2-222	ENST00000533860	LLPH	Q9BRT6	129 aa	Known RBP	18.32	■□□□□ 0.52
APLP2-222	ENST00000533860	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	18.32	■□□□□ 0.52
APLP2-222	ENST00000533860	MTMR4	Q9NYA4	1195 aa		18.32	■□□□□ 0.52
APLP2-222	ENST00000533860	GGA3	Q9NZ52	723 aa		18.32	■□□□□ 0.52
APLP2-222	ENST00000533860	ZC3H4	Q9UPT8	1303 aa	Known RBP	18.31	■□□□□ 0.52
APLP2-222	ENST00000533860	GLTPD2	A6NH11	291 aa		18.31	■□□□□ 0.52
APLP2-222	ENST00000533860	POTEC	B2RU33	542 aa		18.31	■□□□□ 0.52
APLP2-222	ENST00000533860	LMOD1	P29536	600 aa	Predicted RBP	18.31	■□□□□ 0.52
APLP2-222	ENST00000533860	RTN1	Q16799	776 aa		18.31	■□□□□ 0.52
APLP2-222	ENST00000533860	CCDC178	Q5BJE1	867 aa		18.31	■□□□□ 0.52
APLP2-222	ENST00000533860	CCDC17	Q96LX7	622 aa		18.31	■□□□□ 0.52
APLP2-222	ENST00000533860	DEFB129	Q9H1M3	183 aa		18.31	■□□□□ 0.52
APLP2-222	ENST00000533860	HERC5	Q9UII4	1024 aa	Known RBP	18.31	■□□□□ 0.52
APLP2-222	ENST00000533860	TAOK2	Q9UL54	1235 aa		18.31	■□□□□ 0.52
APLP2-222	ENST00000533860	MYH4	Q9Y623	1939 aa		18.31	■□□□□ 0.52
APLP2-222	ENST00000533860	UTRN	P46939	3433 aa		18.31	■□□□□ 0.52
APLP2-222	ENST00000533860	MPHOSPH10	O00566	681 aa	Known RBP	18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	TBC1D12	O60347	775 aa		18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	DDAH1	O94760	285 aa		18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	SYT1	P21579	422 aa		18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	RCAN1	P53805	252 aa		18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	TNFAIP1	Q13829	316 aa		18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	RAB3GAP1	Q15042	981 aa		18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	NBPF12	Q5TAG4	269 aa	Predicted RBP	18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	PRAMEF18	Q5VWM3	479 aa		18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	DPY19L2	Q6NUT2	758 aa		18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	SYNE3	Q6ZMZ3	975 aa		18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	CATIP	Q7Z7H3	387 aa		18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	FANCB	Q8NB91	859 aa		18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	PNMA1	Q8ND90	353 aa		18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	TRIM34	Q9BYJ4	488 aa		18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	KAT14	Q9H8E8	782 aa		18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	STX8	Q9UNK0	236 aa		18.3	■□□□□ 0.52
APLP2-222	ENST00000533860	WDR90	Q96KV7	1748 aa		18.29	■□□□□ 0.52
APLP2-222	ENST00000533860	SSC5D	A1L4H1	1573 aa		18.29	■□□□□ 0.52
APLP2-222	ENST00000533860	UBE2Q2L	H0YL09	131 aa		18.29	■□□□□ 0.52
APLP2-222	ENST00000533860	SEPT2	Q15019	361 aa		18.29	■□□□□ 0.52
APLP2-222	ENST00000533860	DLK2	Q6UY11	383 aa		18.29	■□□□□ 0.52
APLP2-222	ENST00000533860	SIAH1	Q8IUQ4	282 aa		18.29	■□□□□ 0.52
APLP2-222	ENST00000533860	APOBEC3F	Q8IUX4	373 aa	Known RBP	18.29	■□□□□ 0.52
APLP2-222	ENST00000533860	CMTR1	Q8N1G2	835 aa	Known RBP	18.29	■□□□□ 0.52
APLP2-222	ENST00000533860	CHMP4C	Q96CF2	233 aa		18.29	■□□□□ 0.52
APLP2-222	ENST00000533860	PLEKHA8P1	O95397	391 aa		18.28	■□□□□ 0.52
APLP2-222	ENST00000533860	BRD1	O95696	1058 aa		18.28	■□□□□ 0.52
APLP2-222	ENST00000533860	FUT2	Q10981	343 aa		18.28	■□□□□ 0.52
APLP2-222	ENST00000533860	ABCB5	Q2M3G0	1257 aa		18.28	■□□□□ 0.52
APLP2-222	ENST00000533860	FOXD4L5	Q5VV16	416 aa	Predicted RBP	18.28	■□□□□ 0.52
APLP2-222	ENST00000533860	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	18.28	■□□□□ 0.52
APLP2-222	ENST00000533860	PHKB	Q93100	1093 aa		18.28	■□□□□ 0.52
APLP2-222	ENST00000533860	SCN4A	P35499	1836 aa		18.28	■□□□□ 0.52
APLP2-222	ENST00000533860	ATAD5	Q96QE3	1844 aa		18.28	■□□□□ 0.52
APLP2-222	ENST00000533860	PHF20L1	A8MW92	1017 aa		18.27	■□□□□ 0.52
APLP2-222	ENST00000533860	GH2	P01242	217 aa		18.27	■□□□□ 0.52
APLP2-222	ENST00000533860	TOP1	P11387	765 aa	Known RBP	18.27	■□□□□ 0.52
APLP2-222	ENST00000533860	GRM4	Q14833	912 aa		18.27	■□□□□ 0.52
APLP2-222	ENST00000533860	SLC35G1	Q2M3R5	365 aa		18.27	■□□□□ 0.52
APLP2-222	ENST00000533860	NBPF11	Q86T75	865 aa		18.27	■□□□□ 0.52
APLP2-222	ENST00000533860	LRRC47	Q8N1G4	583 aa	Known RBP	18.27	■□□□□ 0.52
APLP2-222	ENST00000533860	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	18.27	■□□□□ 0.52
APLP2-222	ENST00000533860	CLIP2	Q9UDT6	1046 aa		18.27	■□□□□ 0.52
APLP2-222	ENST00000533860	MTMR7	Q9Y216	660 aa		18.27	■□□□□ 0.52
APLP2-222	ENST00000533860	MTMR6	Q9Y217	621 aa		18.27	■□□□□ 0.52
APLP2-222	ENST00000533860	CPLX1	O14810	134 aa		18.26	■□□□□ 0.51
APLP2-222	ENST00000533860	CALM1	P0DP23	149 aa		18.26	■□□□□ 0.51
APLP2-222	ENST00000533860	CALM2	P0DP24	149 aa		18.26	■□□□□ 0.51
APLP2-222	ENST00000533860	CALM3	P0DP25	149 aa		18.26	■□□□□ 0.51
APLP2-222	ENST00000533860	IFNAR1	P17181	557 aa		18.26	■□□□□ 0.51
APLP2-222	ENST00000533860	EPHX2	P34913	555 aa		18.26	■□□□□ 0.51
APLP2-222	ENST00000533860	FOSB	P53539	338 aa		18.26	■□□□□ 0.51
APLP2-222	ENST00000533860	NUCB2	P80303	420 aa		18.26	■□□□□ 0.51
APLP2-222	ENST00000533860	TMEM179	Q6ZVK1	233 aa		18.26	■□□□□ 0.51
APLP2-222	ENST00000533860	STAG2	Q8N3U4	1231 aa		18.26	■□□□□ 0.51
APLP2-222	ENST00000533860	TNPO1	Q92973	898 aa	Known RBP	18.26	■□□□□ 0.51
APLP2-222	ENST00000533860	AIFM3	Q96NN9	605 aa		18.26	■□□□□ 0.51
APLP2-222	ENST00000533860	ORC3	Q9UBD5	711 aa	Predicted RBP	18.26	■□□□□ 0.51
APLP2-222	ENST00000533860	PITPNM2	Q9BZ72	1349 aa		18.26	■□□□□ 0.51
APLP2-222	ENST00000533860	STX6	O43752	255 aa		18.25	■□□□□ 0.51
APLP2-222	ENST00000533860	DHX16	O60231	1041 aa	Known RBP	18.25	■□□□□ 0.51
APLP2-222	ENST00000533860	TTLL1	O95922	423 aa		18.25	■□□□□ 0.51
APLP2-222	ENST00000533860	EEF2	P13639	858 aa	Known RBP	18.25	■□□□□ 0.51
APLP2-222	ENST00000533860	HMGN5	P82970	282 aa	Known RBP	18.25	■□□□□ 0.51
APLP2-222	ENST00000533860	LARP1B	Q659C4	914 aa	Known RBP	18.25	■□□□□ 0.51
APLP2-222	ENST00000533860	TMTC3	Q6ZXV5	915 aa		18.25	■□□□□ 0.51
APLP2-222	ENST00000533860	SRBD1	Q8N5C6	995 aa	Known RBP	18.25	■□□□□ 0.51
APLP2-222	ENST00000533860	TAF1D	Q9H5J8	278 aa	Predicted RBP	18.25	■□□□□ 0.51
APLP2-222	ENST00000533860	FZD1	Q9UP38	647 aa		18.25	■□□□□ 0.51
APLP2-222	ENST00000533860	MYH6	P13533	1939 aa		18.25	■□□□□ 0.51
APLP2-222	ENST00000533860	CNTNAP5	Q8WYK1	1306 aa		18.24	■□□□□ 0.51
APLP2-222	ENST00000533860	ADM5	C9JUS6	153 aa		18.24	■□□□□ 0.51
APLP2-222	ENST00000533860	FMNL1	O95466	1100 aa	Predicted RBP	18.24	■□□□□ 0.51
APLP2-222	ENST00000533860	CCDC82	Q8N4S0	544 aa		18.24	■□□□□ 0.51
APLP2-222	ENST00000533860	CHAMP1	Q96JM3	812 aa		18.24	■□□□□ 0.51
APLP2-222	ENST00000533860	MAP3K14	Q99558	947 aa		18.24	■□□□□ 0.51
APLP2-222	ENST00000533860	GJB4	Q9NTQ9	266 aa		18.24	■□□□□ 0.51
APLP2-222	ENST00000533860	NYAP2	Q9P242	653 aa		18.24	■□□□□ 0.51
APLP2-222	ENST00000533860	MAD2L2	Q9UI95	211 aa		18.24	■□□□□ 0.51

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