RNA–Protein interactions for RNA: ENST00000533409.1

MS4A6A-218, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 3

Gene MS4A6A, Length 682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-218ENST00000533409 HSP90AB3PQ58FF7 597 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 C1orf53Q5VUE5 145 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 ZKSCAN2Q63HK3 967 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 KSR2Q6VAB6 950 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 DZIP3Q86Y13 1208 aaKnown RBP4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 FTSJ3Q8IY81 847 aaKnown RBP4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 DRC7Q8IY82 874 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 CHPFQ8IZ52 775 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 STAG2Q8N3U4 1231 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 PDILTQ8N807 584 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 TEX19Q8NA77 164 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 MARCH10Q8NA82 808 aaPredicted RBP4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 EDEM1Q92611 657 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 C2orf49Q9BVC5 232 aaPredicted RBP4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 NT5C1AQ9BXI3 368 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 RBSNQ9H1K0 784 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 CAAP1Q9H8G2 361 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 PPCSQ9HAB8 311 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 LGR6Q9HBX8 967 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 ZNF652Q9Y2D9 606 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 PCDHB11Q9Y5F2 797 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 PLCH1Q4KWH8 1693 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 LRP6O75581 1613 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 MEGF6O75095 1541 aa4.82□□□□□ -1.64
MS4A6A-218ENST00000533409 RGPD5Q99666 1765 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 NPHP1O15259 732 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 CPNE3O75131 537 aaKnown RBP4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 F2P00734 622 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 NUDT7P0C024 238 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 VARSP26640 1264 aaKnown RBP4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 IRS1P35568 1242 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 MAP3K10Q02779 954 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 DNM1Q05193 864 aaKnown RBP4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 EXOSC9Q06265 439 aaKnown RBP4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 DCTN1Q14203 1278 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 PUS10Q3MIT2 529 aaKnown RBP4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 RC3H1Q5TC82 1133 aaKnown RBP4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 USPL1Q5W0Q7 1092 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 POTEAQ6S8J7 498 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 SH3RF1Q7Z6J0 888 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 DGKHQ86XP1 1220 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 ETFBKMTQ8IXQ9 262 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 PAF1Q8N7H5 531 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 PIGBQ92521 554 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 NINJ1Q92982 152 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 RHOVQ96L33 236 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 NEUROD6Q96NK8 337 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 SRRTQ9BXP5 876 aaKnown RBP4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 MUC3BQ9H195 1237 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 DDX21Q9NR30 783 aaKnown RBP eCLIP4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 SMC4Q9NTJ3 1288 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 R3HCC1Q9Y3T6 440 aaKnown RBP4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 PPP2R3BQ9Y5P8 575 aa4.81□□□□□ -1.64
MS4A6A-218ENST00000533409 LOC102724428A0A0B4J2F2 783 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 PRPF3O43395 683 aaKnown RBP4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 VAMP4O75379 141 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 KATNA1O75449 491 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 MYL3P08590 195 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 CCNYL3P0C7X3 344 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 MYCLP1P12525 358 aaPredicted RBP4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 GARTP22102 1010 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 PTPREP23469 700 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 SOX5P35711 763 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 EIF4A3P38919 411 aaKnown RBP4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 HTR3AP46098 478 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 CCT4P50991 539 aaKnown RBP4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 SIK1P57059 783 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 PURAQ00577 322 aaKnown RBP4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 NFKB2Q00653 900 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 FOXK2Q01167 660 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 FAM102BQ5T8I3 360 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 KIF6Q6ZMV9 814 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 ZBTB33Q86T24 672 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 NIM1KQ8IY84 436 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 MAGEB6Q8N7X4 407 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 EPS8L3Q8TE67 593 aaKnown RBP4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 KCTD12Q96CX2 325 aaKnown RBP4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 CAMKK2Q96RR4 588 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 SRCIN1Q9C0H9 1055 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 EVA1BQ9NVM1 165 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 LUZP4Q9P127 313 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 PDZRN3Q9UPQ7 1066 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 PKD1L3Q7Z443 1732 aa4.8□□□□□ -1.64
MS4A6A-218ENST00000533409 HEG1Q9ULI3 1381 aa4.79□□□□□ -1.64
MS4A6A-218ENST00000533409 KLRG2A4D1S0 409 aaPredicted RBP4.79□□□□□ -1.64
MS4A6A-218ENST00000533409 GSG1L2A8MUP6 293 aa4.79□□□□□ -1.64
MS4A6A-218ENST00000533409 ERVV-1B6SEH8 477 aa4.79□□□□□ -1.64
MS4A6A-218ENST00000533409 PPP1R12BO60237 982 aaPredicted RBP4.79□□□□□ -1.64
MS4A6A-218ENST00000533409 GREM1O60565 184 aa4.79□□□□□ -1.64
MS4A6A-218ENST00000533409 PDE8AO60658 829 aa4.79□□□□□ -1.64
MS4A6A-218ENST00000533409 ZPR1O75312 459 aa4.79□□□□□ -1.64
MS4A6A-218ENST00000533409 TCEA3O75764 348 aa4.79□□□□□ -1.64
MS4A6A-218ENST00000533409 RNASEH2AO75792 299 aaKnown RBP4.79□□□□□ -1.64
MS4A6A-218ENST00000533409 APBA3O96018 575 aa4.79□□□□□ -1.64
MS4A6A-218ENST00000533409 VDRP11473 427 aa4.79□□□□□ -1.64
MS4A6A-218ENST00000533409 EIF2S2P20042 333 aaKnown RBP4.79□□□□□ -1.64
MS4A6A-218ENST00000533409 CALRP27797 417 aaKnown RBP4.79□□□□□ -1.64
MS4A6A-218ENST00000533409 IL6STP40189 918 aaPredicted RBP4.79□□□□□ -1.64
MS4A6A-218ENST00000533409 ZAP70P43403 619 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms