RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 ZMYM6O95789 1325 aa11.78□□□□□ -0.52
NUP98-220ENST00000533346 RLFQ13129 1914 aa11.78□□□□□ -0.52
NUP98-220ENST00000533346 RBBP6Q7Z6E9 1792 aaKnown RBP11.77□□□□□ -0.52
NUP98-220ENST00000533346 PARP14Q460N5 1801 aa11.77□□□□□ -0.52
NUP98-220ENST00000533346 FOXP2O15409 715 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 FGRP09769 529 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 CYP2C8P10632 490 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 SOX10P56693 466 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 EVX2Q03828 476 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 KIF22Q14807 665 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 FAM110CQ1W6H9 321 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 MCMDC2Q4G0Z9 681 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 LBX2Q6XYB7 198 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 SIAH1Q8IUQ4 282 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 DYNLL2Q96FJ2 89 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 NACAP1Q9BZK3 213 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 ZNF287Q9HBT7 754 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 MORF4L1Q9UBU8 362 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 ANAPC4Q9UJX5 808 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 SYNPO2Q9UMS6 1093 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 HPS5Q9UPZ3 1129 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 TRIM17Q9Y577 477 aa11.77□□□□□ -0.53
NUP98-220ENST00000533346 HIP1O00291 1037 aa11.76□□□□□ -0.53
NUP98-220ENST00000533346 SDSP20132 328 aa11.76□□□□□ -0.53
NUP98-220ENST00000533346 PDE4AP27815 886 aa11.76□□□□□ -0.53
NUP98-220ENST00000533346 SEPT2Q15019 361 aa11.76□□□□□ -0.53
NUP98-220ENST00000533346 SLC4A8Q2Y0W8 1093 aa11.76□□□□□ -0.53
NUP98-220ENST00000533346 ASCC2Q9H1I8 757 aaPredicted RBP11.76□□□□□ -0.53
NUP98-220ENST00000533346 KANSL2Q9H9L4 492 aa11.76□□□□□ -0.53
NUP98-220ENST00000533346 CPA4Q9UI42 421 aa11.76□□□□□ -0.53
NUP98-220ENST00000533346 TMX2Q9Y320 296 aa11.76□□□□□ -0.53
NUP98-220ENST00000533346 ZSWIM8A7E2V4 1837 aa11.76□□□□□ -0.53
NUP98-220ENST00000533346 DOCK3Q8IZD9 2030 aa11.76□□□□□ -0.53
NUP98-220ENST00000533346 CYP2D7A0A087X1C5 515 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 IGKV6D-41A0A0C4DH26 115 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 A0A1W2PRG0 241 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 USP17L15C9J2P7 530 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 USP17L13C9JLJ4 530 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 USP17L11C9JVI0 530 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 USP17L18D6R9N7 530 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 USP17L22D6RA61 530 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 USP17L17D6RBQ6 530 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 USP17L19D6RCP7 530 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 USP17L20D6RJB6 530 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 SMIM22K7EJ46 135 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 AKR1B1P15121 316 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 RASA1P20936 1047 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 HOXD10P28358 340 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 CTGFP29279 349 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 NT5C2P49902 561 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 USP17L24Q0WX57 530 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 RAB3GAP1Q15042 981 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 CATSPERGQ6ZRH7 1159 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 SLC44A5Q8NCS7 719 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 LPAR1Q92633 364 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 ARMC5Q96C12 935 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.75□□□□□ -0.53
NUP98-220ENST00000533346 SH2D4AQ9H788 454 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 PLIN4Q96Q06 1357 aa11.75□□□□□ -0.53
NUP98-220ENST00000533346 MYH4Q9Y623 1939 aa11.74□□□□□ -0.53
NUP98-220ENST00000533346 TRIM6-TRIM34B2RNG4 842 aa11.74□□□□□ -0.53
NUP98-220ENST00000533346 PSMC4P43686 418 aa11.74□□□□□ -0.53
NUP98-220ENST00000533346 NOVP48745 357 aa11.74□□□□□ -0.53
NUP98-220ENST00000533346 TDO2P48775 406 aa11.74□□□□□ -0.53
NUP98-220ENST00000533346 MFAP1P55081 439 aaKnown RBP11.74□□□□□ -0.53
NUP98-220ENST00000533346 ACER1Q8TDN7 264 aa11.74□□□□□ -0.53
NUP98-220ENST00000533346 SMCR8Q8TEV9 937 aaPredicted RBP11.74□□□□□ -0.53
NUP98-220ENST00000533346 MKL1Q969V6 931 aa11.74□□□□□ -0.53
NUP98-220ENST00000533346 NAPBQ9H115 298 aa11.74□□□□□ -0.53
NUP98-220ENST00000533346 ARHGEF10LQ9HCE6 1279 aa11.74□□□□□ -0.53
NUP98-220ENST00000533346 NYAP2Q9P242 653 aa11.74□□□□□ -0.53
NUP98-220ENST00000533346 SRRDQ9UH36 339 aa11.74□□□□□ -0.53
NUP98-220ENST00000533346 MYPNQ86TC9 1320 aa11.74□□□□□ -0.53
NUP98-220ENST00000533346 A0A0G2JMZ2 1700 aa11.74□□□□□ -0.53
NUP98-220ENST00000533346 A0A0D9SFI3 127 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 MINDY4BA8MYZ0 360 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 PLXNB2O15031 1838 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 APPP05067 770 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 SLC3A2P08195 630 aaKnown RBP11.73□□□□□ -0.53
NUP98-220ENST00000533346 HSPD1P10809 573 aaKnown RBP11.73□□□□□ -0.53
NUP98-220ENST00000533346 PCP11498 1178 aaKnown RBP11.73□□□□□ -0.53
NUP98-220ENST00000533346 VCAM1P19320 739 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 FCGRTP55899 365 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 HERVK_113P62684 666 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 IRX6P78412 446 aaPredicted RBP11.73□□□□□ -0.53
NUP98-220ENST00000533346 PDE4BQ07343 736 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 PPARAQ07869 468 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 IRF5Q13568 498 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 TTC22Q5TAA0 569 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 CCDC171Q6TFL3 1326 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 NEDD1Q8NHV4 660 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 TRIM47Q96LD4 638 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 FAM227BQ96M60 508 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 P2RX7Q99572 595 aaKnown RBP11.73□□□□□ -0.53
NUP98-220ENST00000533346 ARHGAP39Q9C0H5 1083 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 VCPKMTQ9H867 229 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 RBPJLQ9UBG7 517 aa11.73□□□□□ -0.53
NUP98-220ENST00000533346 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
NUP98-220ENST00000533346 LAMA4Q16363 1823 aa11.72□□□□□ -0.53
NUP98-220ENST00000533346 MPHOSPH10O00566 681 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms