RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ACER1Q8TDN7 264 aa14.25□□□□□ -0.13
SSBP3-214ENST00000533209 ZNF287Q9HBT7 754 aa14.25□□□□□ -0.13
SSBP3-214ENST00000533209 CTCFP49711 727 aaPredicted RBP14.24□□□□□ -0.13
SSBP3-214ENST00000533209 DGKZQ13574 1117 aa14.24□□□□□ -0.13
SSBP3-214ENST00000533209 GADL1Q6ZQY3 521 aa14.24□□□□□ -0.13
SSBP3-214ENST00000533209 TBC1D10CQ8IV04 446 aa14.24□□□□□ -0.13
SSBP3-214ENST00000533209 ZNF444Q8N0Y2 327 aaPredicted RBP14.24□□□□□ -0.13
SSBP3-214ENST00000533209 CFHR5Q9BXR6 569 aa14.24□□□□□ -0.13
SSBP3-214ENST00000533209 R3HDMLQ9H3Y0 253 aa14.24□□□□□ -0.13
SSBP3-214ENST00000533209 ZCCHC17Q9NP64 241 aaKnown RBP14.24□□□□□ -0.13
SSBP3-214ENST00000533209 A0A1W2PRG0 241 aa14.23□□□□□ -0.13
SSBP3-214ENST00000533209 C19orf81C9J6K1 198 aa14.23□□□□□ -0.13
SSBP3-214ENST00000533209 PDHXO00330 501 aa14.23□□□□□ -0.13
SSBP3-214ENST00000533209 ORC4O43929 436 aa14.23□□□□□ -0.13
SSBP3-214ENST00000533209 TBC1D8O95759 1140 aa14.23□□□□□ -0.13
SSBP3-214ENST00000533209 ICA1Q05084 483 aa14.23□□□□□ -0.13
SSBP3-214ENST00000533209 PROCA1Q8NCQ7 364 aaPredicted RBP14.23□□□□□ -0.13
SSBP3-214ENST00000533209 NEDD1Q8NHV4 660 aa14.23□□□□□ -0.13
SSBP3-214ENST00000533209 STAG1Q8WVM7 1258 aa14.23□□□□□ -0.13
SSBP3-214ENST00000533209 KIAA1683Q9H0B3 1180 aa14.23□□□□□ -0.13
SSBP3-214ENST00000533209 CTNNA3Q9UI47 895 aa14.23□□□□□ -0.13
SSBP3-214ENST00000533209 IGKV6D-41A0A0C4DH26 115 aa14.22□□□□□ -0.13
SSBP3-214ENST00000533209 ZNF213O14771 459 aa14.22□□□□□ -0.13
SSBP3-214ENST00000533209 LBX1P52954 281 aa14.22□□□□□ -0.13
SSBP3-214ENST00000533209 TFAP4Q01664 338 aa14.22□□□□□ -0.13
SSBP3-214ENST00000533209 CRHR2Q13324 411 aa14.22□□□□□ -0.13
SSBP3-214ENST00000533209 TAF1CQ15572 869 aaPredicted RBP14.22□□□□□ -0.13
SSBP3-214ENST00000533209 FAM47AQ5JRC9 791 aa14.22□□□□□ -0.13
SSBP3-214ENST00000533209 AKNAD1Q5T1N1 836 aa14.22□□□□□ -0.13
SSBP3-214ENST00000533209 TREML2Q5T2D2 321 aa14.22□□□□□ -0.13
SSBP3-214ENST00000533209 USP17L2Q6R6M4 530 aa14.22□□□□□ -0.13
SSBP3-214ENST00000533209 MAP4K1Q92918 833 aa14.22□□□□□ -0.13
SSBP3-214ENST00000533209 LSG1Q9H089 658 aaKnown RBP14.22□□□□□ -0.13
SSBP3-214ENST00000533209 KANSL2Q9H9L4 492 aa14.22□□□□□ -0.13
SSBP3-214ENST00000533209 EMILIN3Q9NT22 766 aa14.22□□□□□ -0.13
SSBP3-214ENST00000533209 AGTPBP1Q9UPW5 1226 aa14.22□□□□□ -0.13
SSBP3-214ENST00000533209 U3KPZ7 1027 aaPredicted RBP14.22□□□□□ -0.13
SSBP3-214ENST00000533209 PLIN4Q96Q06 1357 aa14.22□□□□□ -0.13
SSBP3-214ENST00000533209 TSPY3P0CV98 308 aa14.21□□□□□ -0.13
SSBP3-214ENST00000533209 TSPY8P0CW00 308 aa14.21□□□□□ -0.13
SSBP3-214ENST00000533209 PCP11498 1178 aaKnown RBP14.21□□□□□ -0.13
SSBP3-214ENST00000533209 EEF2P13639 858 aaKnown RBP14.21□□□□□ -0.13
SSBP3-214ENST00000533209 ZYXQ15942 572 aaKnown RBP14.21□□□□□ -0.13
SSBP3-214ENST00000533209 IMMTQ16891 758 aaKnown RBP14.21□□□□□ -0.13
SSBP3-214ENST00000533209 CASC1Q6TDU7 716 aa14.21□□□□□ -0.13
SSBP3-214ENST00000533209 MFSD6Q6ZSS7 791 aa14.21□□□□□ -0.13
SSBP3-214ENST00000533209 NKX2-3Q8TAU0 364 aa14.21□□□□□ -0.13
SSBP3-214ENST00000533209 C12orf42Q96LP6 360 aa14.21□□□□□ -0.13
SSBP3-214ENST00000533209 FEZ1Q99689 392 aa14.21□□□□□ -0.13
SSBP3-214ENST00000533209 TMOD4Q9NZQ9 345 aa14.21□□□□□ -0.13
SSBP3-214ENST00000533209 SLC45A1Q9Y2W3 748 aa14.21□□□□□ -0.13
SSBP3-214ENST00000533209 PTPRFP10586 1907 aa14.21□□□□□ -0.14
SSBP3-214ENST00000533209 NEDD4P46934 1319 aa14.2□□□□□ -0.14
SSBP3-214ENST00000533209 GREB1LQ9C091 1923 aaPredicted RBP14.2□□□□□ -0.14
SSBP3-214ENST00000533209 RANBP6O60518 1105 aaKnown RBP14.2□□□□□ -0.14
SSBP3-214ENST00000533209 CYP21A2P08686 494 aa14.2□□□□□ -0.14
SSBP3-214ENST00000533209 USP14P54578 494 aa14.2□□□□□ -0.14
SSBP3-214ENST00000533209 KIAA1755Q5JYT7 1200 aa14.2□□□□□ -0.14
SSBP3-214ENST00000533209 KIAA1211Q6ZU35 1233 aa14.2□□□□□ -0.14
SSBP3-214ENST00000533209 RNF41Q9H4P4 317 aaPredicted RBP14.2□□□□□ -0.14
SSBP3-214ENST00000533209 ZFYVE28Q9HCC9 887 aa14.2□□□□□ -0.14
SSBP3-214ENST00000533209 ARHGEF10LQ9HCE6 1279 aa14.2□□□□□ -0.14
SSBP3-214ENST00000533209 TOMM22Q9NS69 142 aa14.2□□□□□ -0.14
SSBP3-214ENST00000533209 MTMR4Q9NYA4 1195 aa14.2□□□□□ -0.14
SSBP3-214ENST00000533209 NYAP2Q9P242 653 aa14.2□□□□□ -0.14
SSBP3-214ENST00000533209 TMX2Q9Y320 296 aa14.2□□□□□ -0.14
SSBP3-214ENST00000533209 RBM8AQ9Y5S9 174 aaKnown RBP14.2□□□□□ -0.14
SSBP3-214ENST00000533209 ADGRA2Q96PE1 1338 aa14.19□□□□□ -0.14
SSBP3-214ENST00000533209 TSPY2A6NKD2 308 aa14.19□□□□□ -0.14
SSBP3-214ENST00000533209 GPR25O00155 361 aa14.19□□□□□ -0.14
SSBP3-214ENST00000533209 CYP2C8P10632 490 aa14.19□□□□□ -0.14
SSBP3-214ENST00000533209 HOXA7P31268 230 aaPredicted RBP14.19□□□□□ -0.14
SSBP3-214ENST00000533209 ATP2B2Q01814 1243 aa14.19□□□□□ -0.14
SSBP3-214ENST00000533209 NOM1Q5C9Z4 860 aaKnown RBP14.19□□□□□ -0.14
SSBP3-214ENST00000533209 RRP12Q5JTH9 1297 aaKnown RBP14.19□□□□□ -0.14
SSBP3-214ENST00000533209 CEP95Q96GE4 821 aa14.19□□□□□ -0.14
SSBP3-214ENST00000533209 SH2D4AQ9H788 454 aa14.19□□□□□ -0.14
SSBP3-214ENST00000533209 ANO2Q9NQ90 1003 aa14.19□□□□□ -0.14
SSBP3-214ENST00000533209 PRDM10Q9NQV6 1147 aa14.19□□□□□ -0.14
SSBP3-214ENST00000533209 IL17RBQ9NRM6 502 aa14.19□□□□□ -0.14
SSBP3-214ENST00000533209 TAF6LQ9Y6J9 622 aa14.19□□□□□ -0.14
SSBP3-214ENST00000533209 MYH8P13535 1937 aa14.19□□□□□ -0.14
SSBP3-214ENST00000533209 LOC285556D6RIA3 1793 aa14.19□□□□□ -0.14
SSBP3-214ENST00000533209 NMT2O60551 498 aa14.18□□□□□ -0.14
SSBP3-214ENST00000533209 TLR2O60603 784 aa14.18□□□□□ -0.14
SSBP3-214ENST00000533209 VCAM1P19320 739 aa14.18□□□□□ -0.14
SSBP3-214ENST00000533209 PARK7Q99497 189 aaKnown RBP14.18□□□□□ -0.14
SSBP3-214ENST00000533209 ASCC2Q9H1I8 757 aaPredicted RBP14.18□□□□□ -0.14
SSBP3-214ENST00000533209 VCPKMTQ9H867 229 aa14.18□□□□□ -0.14
SSBP3-214ENST00000533209 CLIP2Q9UDT6 1046 aa14.18□□□□□ -0.14
SSBP3-214ENST00000533209 B4E1Z4 1266 aa14.17□□□□□ -0.14
SSBP3-214ENST00000533209 TTLL1O95922 423 aa14.17□□□□□ -0.14
SSBP3-214ENST00000533209 NOVP48745 357 aa14.17□□□□□ -0.14
SSBP3-214ENST00000533209 PABPC4Q13310 644 aaKnown RBP eCLIP14.17□□□□□ -0.14
SSBP3-214ENST00000533209 NECTIN1Q15223 517 aa14.17□□□□□ -0.14
SSBP3-214ENST00000533209 ZNF296Q8WUU4 475 aaPredicted RBP14.17□□□□□ -0.14
SSBP3-214ENST00000533209 ESR2Q92731 530 aa14.17□□□□□ -0.14
SSBP3-214ENST00000533209 MKL1Q969V6 931 aa14.17□□□□□ -0.14
SSBP3-214ENST00000533209 TCP11L1Q9NUJ3 509 aa14.17□□□□□ -0.14
SSBP3-214ENST00000533209 LAMA4Q16363 1823 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms