RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 GIPRP48546 466 aa7.12□□□□□ -1.27
C11orf54-212ENST00000533154 HNRNPMP52272 730 aaKnown RBP eCLIP7.12□□□□□ -1.27
C11orf54-212ENST00000533154 PPP2R3AQ06190 1150 aa7.12□□□□□ -1.27
C11orf54-212ENST00000533154 PLEKHG4Q58EX7 1191 aa7.12□□□□□ -1.27
C11orf54-212ENST00000533154 RNF43Q68DV7 783 aa7.12□□□□□ -1.27
C11orf54-212ENST00000533154 SCARA3Q6AZY7 606 aa7.12□□□□□ -1.27
C11orf54-212ENST00000533154 GDF6Q6KF10 455 aaPredicted RBP7.12□□□□□ -1.27
C11orf54-212ENST00000533154 REXO1Q8N1G1 1221 aaKnown RBP7.12□□□□□ -1.27
C11orf54-212ENST00000533154 DCAF11Q8TEB1 546 aa7.12□□□□□ -1.27
C11orf54-212ENST00000533154 KCNB2Q92953 911 aa7.12□□□□□ -1.27
C11orf54-212ENST00000533154 UTP4Q969X6 686 aaKnown RBP7.12□□□□□ -1.27
C11orf54-212ENST00000533154 ANAPC16Q96DE5 110 aa7.12□□□□□ -1.27
C11orf54-212ENST00000533154 ASIC4Q96FT7 647 aa7.12□□□□□ -1.27
C11orf54-212ENST00000533154 RNPC3Q96LT9 517 aaKnown RBP7.12□□□□□ -1.27
C11orf54-212ENST00000533154 HHIPQ96QV1 700 aa7.12□□□□□ -1.27
C11orf54-212ENST00000533154 MIR1-1HGQ9H1L0 117 aa7.12□□□□□ -1.27
C11orf54-212ENST00000533154 TMX1Q9H3N1 280 aa7.12□□□□□ -1.27
C11orf54-212ENST00000533154 SAMD9LQ8IVG5 1584 aa7.12□□□□□ -1.27
C11orf54-212ENST00000533154 CCDC18Q5T9S5 1454 aa7.11□□□□□ -1.27
C11orf54-212ENST00000533154 LOC102724428A0A0B4J2F2 783 aa7.11□□□□□ -1.27
C11orf54-212ENST00000533154 FAM221AA4D161 298 aa7.11□□□□□ -1.27
C11orf54-212ENST00000533154 TRPA1O75762 1119 aa7.11□□□□□ -1.27
C11orf54-212ENST00000533154 F13A1P00488 732 aa7.11□□□□□ -1.27
C11orf54-212ENST00000533154 IMPDH2P12268 514 aa7.11□□□□□ -1.27
C11orf54-212ENST00000533154 LMNB1P20700 586 aa7.11□□□□□ -1.27
C11orf54-212ENST00000533154 DEKP35659 375 aaKnown RBP7.11□□□□□ -1.27
C11orf54-212ENST00000533154 ZNF165P49910 485 aa7.11□□□□□ -1.27
C11orf54-212ENST00000533154 EIF6P56537 245 aaKnown RBP7.11□□□□□ -1.27
C11orf54-212ENST00000533154 SIK1P57059 783 aa7.11□□□□□ -1.27
C11orf54-212ENST00000533154 PTPROQ16827 1216 aa7.11□□□□□ -1.27
C11orf54-212ENST00000533154 CWF19L2Q2TBE0 894 aaKnown RBP7.11□□□□□ -1.27
C11orf54-212ENST00000533154 RNF187Q5TA31 235 aaPredicted RBP7.11□□□□□ -1.27
C11orf54-212ENST00000533154 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.11□□□□□ -1.27
C11orf54-212ENST00000533154 IL22RA1Q8N6P7 574 aa7.11□□□□□ -1.27
C11orf54-212ENST00000533154 ASAP3Q8TDY4 903 aa7.11□□□□□ -1.27
C11orf54-212ENST00000533154 CCDC113Q9H0I3 377 aa7.11□□□□□ -1.27
C11orf54-212ENST00000533154 CLEC4MQ9H2X3 399 aaPredicted RBP7.11□□□□□ -1.27
C11orf54-212ENST00000533154 CYP8B1Q9UNU6 501 aa7.11□□□□□ -1.27
C11orf54-212ENST00000533154 GPATCH8Q9UKJ3 1502 aaKnown RBP7.11□□□□□ -1.27
C11orf54-212ENST00000533154 CNTLNQ9NXG0 1405 aa7.1□□□□□ -1.27
C11orf54-212ENST00000533154 ZMYM3Q14202 1370 aa7.1□□□□□ -1.27
C11orf54-212ENST00000533154 SPAG9O60271 1321 aaKnown RBP7.1□□□□□ -1.27
C11orf54-212ENST00000533154 CAMSAP1Q5T5Y3 1602 aa7.1□□□□□ -1.27
C11orf54-212ENST00000533154 SMAD7O15105 426 aaKnown RBP7.1□□□□□ -1.27
C11orf54-212ENST00000533154 B3GALT4O96024 378 aa7.1□□□□□ -1.27
C11orf54-212ENST00000533154 NME2P22392 152 aa7.1□□□□□ -1.27
C11orf54-212ENST00000533154 SEZ6Q53EL9 994 aa7.1□□□□□ -1.27
C11orf54-212ENST00000533154 BNC2Q6ZN30 1099 aaPredicted RBP7.1□□□□□ -1.27
C11orf54-212ENST00000533154 RBBP8NLQ8NC74 664 aaPredicted RBP7.1□□□□□ -1.27
C11orf54-212ENST00000533154 BSNDQ8WZ55 320 aa7.1□□□□□ -1.27
C11orf54-212ENST00000533154 GPATCH3Q96I76 525 aa7.1□□□□□ -1.27
C11orf54-212ENST00000533154 MUC3BQ9H195 1237 aa7.1□□□□□ -1.27
C11orf54-212ENST00000533154 RBSNQ9H1K0 784 aa7.1□□□□□ -1.27
C11orf54-212ENST00000533154 RASSF4Q9H2L5 321 aa7.1□□□□□ -1.27
C11orf54-212ENST00000533154 ZNRF3Q9ULT6 936 aa7.1□□□□□ -1.27
C11orf54-212ENST00000533154 PPT2Q9UMR5 302 aa7.1□□□□□ -1.27
C11orf54-212ENST00000533154 SYCP2Q9BX26 1530 aa7.1□□□□□ -1.27
C11orf54-212ENST00000533154 SUPT6HQ7KZ85 1726 aaKnown RBP7.1□□□□□ -1.27
C11orf54-212ENST00000533154 CEP162Q5TB80 1403 aa7.1□□□□□ -1.27
C11orf54-212ENST00000533154 ZNF335Q9H4Z2 1342 aaPredicted RBP7.09□□□□□ -1.27
C11orf54-212ENST00000533154 CILPO75339 1184 aa7.09□□□□□ -1.27
C11orf54-212ENST00000533154 GHRHP01286 108 aa7.09□□□□□ -1.27
C11orf54-212ENST00000533154 SETDB1Q15047 1291 aa7.09□□□□□ -1.27
C11orf54-212ENST00000533154 LRRC14Q15048 493 aa7.09□□□□□ -1.27
C11orf54-212ENST00000533154 DDR2Q16832 855 aa7.09□□□□□ -1.27
C11orf54-212ENST00000533154 CCDC81Q6ZN84 652 aa7.09□□□□□ -1.27
C11orf54-212ENST00000533154 REC114Q7Z4M0 266 aa7.09□□□□□ -1.27
C11orf54-212ENST00000533154 SHKBP1Q8TBC3 707 aa7.09□□□□□ -1.27
C11orf54-212ENST00000533154 ZCRB1Q8TBF4 217 aaKnown RBP7.09□□□□□ -1.27
C11orf54-212ENST00000533154 FERD3LQ96RJ6 166 aa7.09□□□□□ -1.27
C11orf54-212ENST00000533154 CEP41Q9BYV8 373 aa7.09□□□□□ -1.27
C11orf54-212ENST00000533154 ACTR10Q9NZ32 417 aa7.09□□□□□ -1.27
C11orf54-212ENST00000533154 ANGEL1Q9UNK9 670 aaKnown RBP7.09□□□□□ -1.27
C11orf54-212ENST00000533154 PRKAB1Q9Y478 270 aa7.09□□□□□ -1.27
C11orf54-212ENST00000533154 MROH2AA6NES4 1674 aa7.09□□□□□ -1.27
C11orf54-212ENST00000533154 NPATQ14207 1427 aa7.09□□□□□ -1.28
C11orf54-212ENST00000533154 SPATA31D1Q6ZQQ2 1576 aa7.08□□□□□ -1.28
C11orf54-212ENST00000533154 ATP7AQ04656 1500 aa7.08□□□□□ -1.28
C11orf54-212ENST00000533154 FAM221BA6H8Z2 402 aa7.08□□□□□ -1.28
C11orf54-212ENST00000533154 SMNDC1O75940 238 aaKnown RBP eCLIP7.08□□□□□ -1.28
C11orf54-212ENST00000533154 BMP6P22004 513 aa7.08□□□□□ -1.28
C11orf54-212ENST00000533154 ATP11AP98196 1134 aa7.08□□□□□ -1.28
C11orf54-212ENST00000533154 RASGRF1Q13972 1273 aa7.08□□□□□ -1.28
C11orf54-212ENST00000533154 FAM169BQ8N8A8 192 aa7.08□□□□□ -1.28
C11orf54-212ENST00000533154 FBXO27Q8NI29 283 aa7.08□□□□□ -1.28
C11orf54-212ENST00000533154 GAL3ST3Q96A11 431 aa7.08□□□□□ -1.28
C11orf54-212ENST00000533154 PLD4Q96BZ4 506 aa7.08□□□□□ -1.28
C11orf54-212ENST00000533154 CRBNQ96SW2 442 aa7.08□□□□□ -1.28
C11orf54-212ENST00000533154 PCDHB5Q9Y5E4 795 aa7.08□□□□□ -1.28
C11orf54-212ENST00000533154 IQSEC2Q5JU85 1478 aa7.08□□□□□ -1.28
C11orf54-212ENST00000533154 FYCO1Q9BQS8 1478 aa7.08□□□□□ -1.28
C11orf54-212ENST00000533154 CLTCQ00610 1675 aaKnown RBP7.08□□□□□ -1.28
C11orf54-212ENST00000533154 ZNF644Q9H582 1327 aaPredicted RBP7.07□□□□□ -1.28
C11orf54-212ENST00000533154 A2MP01023 1474 aa7.07□□□□□ -1.28
C11orf54-212ENST00000533154 hCG_2014768A0A024R1R8 64 aa7.07□□□□□ -1.28
C11orf54-212ENST00000533154 TLR3O15455 904 aaKnown RBP7.07□□□□□ -1.28
C11orf54-212ENST00000533154 IBSPP21815 317 aaPredicted RBP7.07□□□□□ -1.28
C11orf54-212ENST00000533154 HOXA10P31260 410 aaPredicted RBP7.07□□□□□ -1.28
C11orf54-212ENST00000533154 PCDH1Q08174 1060 aa7.07□□□□□ -1.28
C11orf54-212ENST00000533154 FBLN7Q53RD9 439 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms