RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 THEGQ9P2T0 379 aa13.86□□□□□ -0.19
TRAPPC4-213ENST00000533149 ABCF2Q9UG63 623 aa13.86□□□□□ -0.19
TRAPPC4-213ENST00000533149 SLC15A5A6NIM6 579 aa13.85□□□□□ -0.19
TRAPPC4-213ENST00000533149 USP17L10C9JJH3 530 aa13.85□□□□□ -0.19
TRAPPC4-213ENST00000533149 DNAJB2P25686 324 aa13.85□□□□□ -0.19
TRAPPC4-213ENST00000533149 RHBDL3P58872 404 aa13.85□□□□□ -0.19
TRAPPC4-213ENST00000533149 GJC2Q5T442 439 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC4-213ENST00000533149 C1orf53Q5VUE5 145 aa13.85□□□□□ -0.19
TRAPPC4-213ENST00000533149 GAS2L1Q99501 681 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC4-213ENST00000533149 ZNF576Q9H609 170 aa13.85□□□□□ -0.19
TRAPPC4-213ENST00000533149 FLRT1Q9NZU1 646 aa13.85□□□□□ -0.19
TRAPPC4-213ENST00000533149 CEP126Q9P2H0 1117 aa13.85□□□□□ -0.19
TRAPPC4-213ENST00000533149 FBXO3Q9UK99 471 aa13.85□□□□□ -0.19
TRAPPC4-213ENST00000533149 TACC3Q9Y6A5 838 aa13.85□□□□□ -0.19
TRAPPC4-213ENST00000533149 LAMA2P24043 3122 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-213ENST00000533149 PDS5AQ29RF7 1337 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-213ENST00000533149 TRIM43BA6NCK2 446 aa13.84□□□□□ -0.19
TRAPPC4-213ENST00000533149 HOXC6P09630 235 aa13.84□□□□□ -0.19
TRAPPC4-213ENST00000533149 PHKA1P46020 1223 aa13.84□□□□□ -0.19
TRAPPC4-213ENST00000533149 RRP1BQ14684 758 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-213ENST00000533149 AKNAD1Q5T1N1 836 aa13.84□□□□□ -0.19
TRAPPC4-213ENST00000533149 ATG9AQ7Z3C6 839 aa13.84□□□□□ -0.19
TRAPPC4-213ENST00000533149 TRIM43Q96BQ3 446 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC4-213ENST00000533149 GINM1Q9NU53 330 aa13.84□□□□□ -0.19
TRAPPC4-213ENST00000533149 RABGAP1Q9Y3P9 1069 aa13.84□□□□□ -0.19
TRAPPC4-213ENST00000533149 PCDHB15Q9Y5E8 787 aa13.84□□□□□ -0.19
TRAPPC4-213ENST00000533149 IVNS1ABPQ9Y6Y0 642 aa13.84□□□□□ -0.19
TRAPPC4-213ENST00000533149 SYNGAP1Q96PV0 1343 aa13.83□□□□□ -0.19
TRAPPC4-213ENST00000533149 MUC3AQ02505 3323 aa13.83□□□□□ -0.19
TRAPPC4-213ENST00000533149 ATAD5Q96QE3 1844 aa13.83□□□□□ -0.2
TRAPPC4-213ENST00000533149 LDHCP07864 332 aa13.83□□□□□ -0.2
TRAPPC4-213ENST00000533149 PTPREP23469 700 aa13.83□□□□□ -0.2
TRAPPC4-213ENST00000533149 CYP2C19P33261 490 aa13.83□□□□□ -0.2
TRAPPC4-213ENST00000533149 RFX5P48382 616 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC4-213ENST00000533149 WDR78Q5VTH9 848 aa13.83□□□□□ -0.2
TRAPPC4-213ENST00000533149 SH3RF1Q7Z6J0 888 aa13.83□□□□□ -0.2
TRAPPC4-213ENST00000533149 PPM1EQ8WY54 764 aa13.83□□□□□ -0.2
TRAPPC4-213ENST00000533149 TIFAQ96CG3 184 aa13.83□□□□□ -0.2
TRAPPC4-213ENST00000533149 PI4KBQ9UBF8 816 aa13.83□□□□□ -0.2
TRAPPC4-213ENST00000533149 RLFQ13129 1914 aa13.82□□□□□ -0.2
TRAPPC4-213ENST00000533149 CIAO1O76071 339 aa13.82□□□□□ -0.2
TRAPPC4-213ENST00000533149 CYBAP13498 195 aa13.82□□□□□ -0.2
TRAPPC4-213ENST00000533149 GSTO1P78417 241 aa13.82□□□□□ -0.2
TRAPPC4-213ENST00000533149 MECOMQ03112 1051 aa13.82□□□□□ -0.2
TRAPPC4-213ENST00000533149 CCDC102BQ68D86 513 aa13.82□□□□□ -0.2
TRAPPC4-213ENST00000533149 ERICH6Q7L0X2 663 aa13.82□□□□□ -0.2
TRAPPC4-213ENST00000533149 DHX36Q9H2U1 1008 aaKnown RBP13.82□□□□□ -0.2
TRAPPC4-213ENST00000533149 HCN4Q9Y3Q4 1203 aa13.82□□□□□ -0.2
TRAPPC4-213ENST00000533149 RAG1P15918 1043 aa13.81□□□□□ -0.2
TRAPPC4-213ENST00000533149 ADCYAP1R1P41586 468 aa13.81□□□□□ -0.2
TRAPPC4-213ENST00000533149 FPGSQ05932 587 aa13.81□□□□□ -0.2
TRAPPC4-213ENST00000533149 RASGRF1Q13972 1273 aa13.81□□□□□ -0.2
TRAPPC4-213ENST00000533149 GRB14Q14449 540 aa13.81□□□□□ -0.2
TRAPPC4-213ENST00000533149 USP17L2Q6R6M4 530 aa13.81□□□□□ -0.2
TRAPPC4-213ENST00000533149 POTEEQ6S8J3 1075 aa13.81□□□□□ -0.2
TRAPPC4-213ENST00000533149 TRPV1Q8NER1 839 aa13.81□□□□□ -0.2
TRAPPC4-213ENST00000533149 MEIS3Q99687 375 aa13.81□□□□□ -0.2
TRAPPC4-213ENST00000533149 NDUFB9Q9Y6M9 179 aa13.81□□□□□ -0.2
TRAPPC4-213ENST00000533149 CDH23Q9H251 3354 aa13.81□□□□□ -0.2
TRAPPC4-213ENST00000533149 SEPT4O43236 478 aa13.8□□□□□ -0.2
TRAPPC4-213ENST00000533149 MYCNP04198 464 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC4-213ENST00000533149 CLTBP09497 229 aa13.8□□□□□ -0.2
TRAPPC4-213ENST00000533149 EPHB4P54760 987 aa13.8□□□□□ -0.2
TRAPPC4-213ENST00000533149 TLE2Q04725 743 aa13.8□□□□□ -0.2
TRAPPC4-213ENST00000533149 OLFML2BQ68BL8 750 aa13.8□□□□□ -0.2
TRAPPC4-213ENST00000533149 NPLOC4Q8TAT6 608 aa13.8□□□□□ -0.2
TRAPPC4-213ENST00000533149 TRIM34Q9BYJ4 488 aa13.8□□□□□ -0.2
TRAPPC4-213ENST00000533149 USP44Q9H0E7 712 aa13.8□□□□□ -0.2
TRAPPC4-213ENST00000533149 USP17L15C9J2P7 530 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 USP17L13C9JLJ4 530 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 USP17L11C9JVI0 530 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 USP17L18D6R9N7 530 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 USP17L22D6RA61 530 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 USP17L17D6RBQ6 530 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 USP17L19D6RCP7 530 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 USP17L20D6RJB6 530 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 KIAA0355O15063 1070 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 IGHA2P01877 340 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 IGHDP01880 384 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 GNAI3P08754 354 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 ITGB8P26012 769 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 IL15P40933 162 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 USP17L24Q0WX57 530 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 DPP9Q86TI2 863 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 FOXP4Q8IVH2 680 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 FERMT2Q96AC1 680 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 SIL1Q9H173 461 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 TSPYL2Q9H2G4 693 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 C1orf115Q9H7X2 142 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 EMILIN3Q9NT22 766 aa13.79□□□□□ -0.2
TRAPPC4-213ENST00000533149 CNMDO75829 334 aa13.78□□□□□ -0.2
TRAPPC4-213ENST00000533149 KCNA4P22459 653 aa13.78□□□□□ -0.2
TRAPPC4-213ENST00000533149 LRRC41Q15345 812 aa13.78□□□□□ -0.2
TRAPPC4-213ENST00000533149 TEX11Q8IYF3 940 aa13.78□□□□□ -0.2
TRAPPC4-213ENST00000533149 CRACR2BQ8N4Y2 399 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC4-213ENST00000533149 RWDD1Q9H446 243 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC4-213ENST00000533149 ZBTB21Q9ULJ3 1066 aa13.78□□□□□ -0.2
TRAPPC4-213ENST00000533149 STRNO43815 780 aa13.77□□□□□ -0.21
TRAPPC4-213ENST00000533149 GNAI2P04899 355 aa13.77□□□□□ -0.21
TRAPPC4-213ENST00000533149 ADORA1P30542 326 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms