RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 CDC37L1Q7L3B6 337 aa17.33■□□□□ 0.36
NXF1-214ENST00000533048 MIGA2Q7L4E1 593 aa17.33■□□□□ 0.36
NXF1-214ENST00000533048 LARP6Q9BRS8 491 aaKnown RBP17.33■□□□□ 0.36
NXF1-214ENST00000533048 ZNF341Q9BYN7 854 aa17.33■□□□□ 0.36
NXF1-214ENST00000533048 KANSL2Q9H9L4 492 aa17.33■□□□□ 0.36
NXF1-214ENST00000533048 RRAGCQ9HB90 399 aa17.33■□□□□ 0.36
NXF1-214ENST00000533048 SYNPO2Q9UMS6 1093 aa17.33■□□□□ 0.36
NXF1-214ENST00000533048 GOLGA8BA8MQT2 603 aa17.32■□□□□ 0.36
NXF1-214ENST00000533048 JAG1P78504 1218 aa17.32■□□□□ 0.36
NXF1-214ENST00000533048 TROAPQ12815 778 aa17.32■□□□□ 0.36
NXF1-214ENST00000533048 NFXL1Q6ZNB6 911 aa17.32■□□□□ 0.36
NXF1-214ENST00000533048 LDHDQ86WU2 507 aa17.32■□□□□ 0.36
NXF1-214ENST00000533048 ZNF654Q8IZM8 581 aa17.32■□□□□ 0.36
NXF1-214ENST00000533048 NMRK2Q9NPI5 230 aa17.32■□□□□ 0.36
NXF1-214ENST00000533048 ZBTB21Q9ULJ3 1066 aa17.32■□□□□ 0.36
NXF1-214ENST00000533048 SLC12A7Q9Y666 1083 aa17.32■□□□□ 0.36
NXF1-214ENST00000533048 OTOFQ9HC10 1997 aa17.31■□□□□ 0.36
NXF1-214ENST00000533048 ZBTB43O43298 467 aa17.31■□□□□ 0.36
NXF1-214ENST00000533048 CTNND1O60716 968 aaKnown RBP17.31■□□□□ 0.36
NXF1-214ENST00000533048 GDF11O95390 407 aa17.31■□□□□ 0.36
NXF1-214ENST00000533048 TTLL1O95922 423 aa17.31■□□□□ 0.36
NXF1-214ENST00000533048 GH2P01242 217 aa17.31■□□□□ 0.36
NXF1-214ENST00000533048 POTEIP0CG38 1075 aa17.31■□□□□ 0.36
NXF1-214ENST00000533048 POTEJP0CG39 1038 aa17.31■□□□□ 0.36
NXF1-214ENST00000533048 CALM1P0DP23 149 aa17.31■□□□□ 0.36
NXF1-214ENST00000533048 CALM2P0DP24 149 aa17.31■□□□□ 0.36
NXF1-214ENST00000533048 CALM3P0DP25 149 aa17.31■□□□□ 0.36
NXF1-214ENST00000533048 TOP1P11387 765 aaKnown RBP17.31■□□□□ 0.36
NXF1-214ENST00000533048 PPP2R5BQ15173 497 aa17.31■□□□□ 0.36
NXF1-214ENST00000533048 SHROOM1Q2M3G4 852 aaPredicted RBP17.31■□□□□ 0.36
NXF1-214ENST00000533048 CHMP4CQ96CF2 233 aa17.31■□□□□ 0.36
NXF1-214ENST00000533048 MAP3K14Q99558 947 aa17.31■□□□□ 0.36
NXF1-214ENST00000533048 TMEM47Q9BQJ4 181 aa17.31■□□□□ 0.36
NXF1-214ENST00000533048 SLKQ9H2G2 1235 aaPredicted RBP17.31■□□□□ 0.36
NXF1-214ENST00000533048 CABP5Q9NP86 173 aa17.31■□□□□ 0.36
NXF1-214ENST00000533048 NYAP2Q9P242 653 aa17.31■□□□□ 0.36
NXF1-214ENST00000533048 MPHOSPH10O00566 681 aaKnown RBP17.3■□□□□ 0.36
NXF1-214ENST00000533048 ASNSP08243 561 aa17.3■□□□□ 0.36
NXF1-214ENST00000533048 SCRN1Q12765 414 aa17.3■□□□□ 0.36
NXF1-214ENST00000533048 SEPT2Q15019 361 aa17.3■□□□□ 0.36
NXF1-214ENST00000533048 PRAMEF18Q5VWM3 479 aa17.3■□□□□ 0.36
NXF1-214ENST00000533048 CATIPQ7Z7H3 387 aa17.3■□□□□ 0.36
NXF1-214ENST00000533048 PNMA1Q8ND90 353 aa17.3■□□□□ 0.36
NXF1-214ENST00000533048 MKL1Q969V6 931 aa17.3■□□□□ 0.36
NXF1-214ENST00000533048 KLRG1Q96E93 195 aa17.3■□□□□ 0.36
NXF1-214ENST00000533048 CDCA5Q96FF9 252 aa17.3■□□□□ 0.36
NXF1-214ENST00000533048 KAT14Q9H8E8 782 aa17.3■□□□□ 0.36
NXF1-214ENST00000533048 DAXXQ9UER7 740 aaPredicted RBP17.3■□□□□ 0.36
NXF1-214ENST00000533048 STX8Q9UNK0 236 aa17.3■□□□□ 0.36
NXF1-214ENST00000533048 SLC4A3P48751 1232 aa17.29■□□□□ 0.36
NXF1-214ENST00000533048 ICA1Q05084 483 aa17.29■□□□□ 0.36
NXF1-214ENST00000533048 NOL9Q5SY16 702 aaKnown RBP17.29■□□□□ 0.36
NXF1-214ENST00000533048 SYNE3Q6ZMZ3 975 aa17.29■□□□□ 0.36
NXF1-214ENST00000533048 USP48Q86UV5 1035 aa17.29■□□□□ 0.36
NXF1-214ENST00000533048 MICU3Q86XE3 530 aa17.29■□□□□ 0.36
NXF1-214ENST00000533048 CLEC10AQ8IUN9 316 aa17.29■□□□□ 0.36
NXF1-214ENST00000533048 SIAH1Q8IUQ4 282 aa17.29■□□□□ 0.36
NXF1-214ENST00000533048 NECAB1Q8N987 351 aa17.29■□□□□ 0.36
NXF1-214ENST00000533048 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.29■□□□□ 0.365e-8■□□□□ 10.3
NXF1-214ENST00000533048 LLPHQ9BRT6 129 aaKnown RBP17.29■□□□□ 0.36
NXF1-214ENST00000533048 GLIS2Q9BZE0 524 aaPredicted RBP17.29■□□□□ 0.36
NXF1-214ENST00000533048 DHX16O60231 1041 aaKnown RBP17.28■□□□□ 0.36
NXF1-214ENST00000533048 METAP2P50579 478 aaKnown RBP eCLIP17.28■□□□□ 0.36
NXF1-214ENST00000533048 STK3Q13188 491 aa17.28■□□□□ 0.36
NXF1-214ENST00000533048 MAP3K11Q16584 847 aa17.28■□□□□ 0.36
NXF1-214ENST00000533048 CCDC83Q8IWF9 413 aa17.28■□□□□ 0.36
NXF1-214ENST00000533048 FAM217BQ9NTX9 383 aaPredicted RBP17.28■□□□□ 0.36
NXF1-214ENST00000533048 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.28■□□□□ 0.36
NXF1-214ENST00000533048 PHIPQ8WWQ0 1821 aa17.28■□□□□ 0.36
NXF1-214ENST00000533048 GOLGA8AA7E2F4 631 aa17.27■□□□□ 0.36
NXF1-214ENST00000533048 USP2O75604 605 aaPredicted RBP17.27■□□□□ 0.36
NXF1-214ENST00000533048 SNHG28P0DPA3 235 aa17.27■□□□□ 0.36
NXF1-214ENST00000533048 EEF2P13639 858 aaKnown RBP17.27■□□□□ 0.36
NXF1-214ENST00000533048 NF2P35240 595 aa17.27■□□□□ 0.36
NXF1-214ENST00000533048 DDIT3P35638 169 aa17.27■□□□□ 0.36
NXF1-214ENST00000533048 MAP1SQ66K74 1059 aaPredicted RBP17.27■□□□□ 0.36
NXF1-214ENST00000533048 SCYL3Q8IZE3 742 aa17.27■□□□□ 0.36
NXF1-214ENST00000533048 FANCBQ8NB91 859 aa17.27■□□□□ 0.36
NXF1-214ENST00000533048 WRNIP1Q96S55 665 aa17.27■□□□□ 0.36
NXF1-214ENST00000533048 MYL10Q9BUA6 226 aa17.27■□□□□ 0.36
NXF1-214ENST00000533048 CLIP2Q9UDT6 1046 aa17.27■□□□□ 0.36
NXF1-214ENST00000533048 CCDC196A0A1B0GTZ2 297 aa17.26■□□□□ 0.35
NXF1-214ENST00000533048 PPP1R12BO60237 982 aaPredicted RBP17.26■□□□□ 0.35
NXF1-214ENST00000533048 CTDNEP1O95476 244 aa17.26■□□□□ 0.35
NXF1-214ENST00000533048 HSP90AA1P07900 732 aaKnown RBP17.26■□□□□ 0.35
NXF1-214ENST00000533048 CDC27P30260 824 aa17.26■□□□□ 0.35
NXF1-214ENST00000533048 INPP5BP32019 993 aa17.26■□□□□ 0.35
NXF1-214ENST00000533048 CCT2P78371 535 aaKnown RBP17.26■□□□□ 0.35
NXF1-214ENST00000533048 GRM4Q14833 912 aa17.26■□□□□ 0.35
NXF1-214ENST00000533048 RAB3GAP1Q15042 981 aa17.26■□□□□ 0.35
NXF1-214ENST00000533048 RTN1Q16799 776 aa17.26■□□□□ 0.35
NXF1-214ENST00000533048 DLK2Q6UY11 383 aa17.26■□□□□ 0.35
NXF1-214ENST00000533048 GMCL1P1Q8NEA9 526 aa17.26■□□□□ 0.35
NXF1-214ENST00000533048 SMARCC2Q8TAQ2 1214 aa17.26■□□□□ 0.35
NXF1-214ENST00000533048 NCOA5Q9HCD5 579 aaKnown RBP17.26■□□□□ 0.35
NXF1-214ENST00000533048 RBM28Q9NW13 759 aaKnown RBP17.26■□□□□ 0.35
NXF1-214ENST00000533048 NAP1L2Q9ULW6 460 aaPredicted RBP17.26■□□□□ 0.35
NXF1-214ENST00000533048 CLEC11AQ9Y240 323 aa17.26■□□□□ 0.35
NXF1-214ENST00000533048 RXRAP19793 462 aa17.25■□□□□ 0.35
NXF1-214ENST00000533048 NTRK3Q16288 839 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms