RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 PLA2G5P39877 138 aa2.35□□□□□ -2.03
KNL1-211ENST00000533001 TNIP1Q15025 636 aa2.35□□□□□ -2.03
KNL1-211ENST00000533001 HELBQ8NG08 1087 aaPredicted RBP2.35□□□□□ -2.03
KNL1-211ENST00000533001 SLC45A1Q9Y2W3 748 aa2.35□□□□□ -2.03
KNL1-211ENST00000533001 PPP2R3BQ9Y5P8 575 aa2.35□□□□□ -2.03
KNL1-211ENST00000533001 OBSL1O75147 1896 aa2.35□□□□□ -2.03
KNL1-211ENST00000533001 PPATQ06203 517 aa2.35□□□□□ -2.03
KNL1-211ENST00000533001 TEFQ10587 303 aa2.35□□□□□ -2.03
KNL1-211ENST00000533001 PPIL2Q13356 520 aa2.35□□□□□ -2.03
KNL1-211ENST00000533001 TTLL5Q6EMB2 1281 aa2.35□□□□□ -2.03
KNL1-211ENST00000533001 ANKRD33Q7Z3H0 272 aa2.35□□□□□ -2.03
KNL1-211ENST00000533001 ANKRD23Q86SG2 305 aa2.35□□□□□ -2.03
KNL1-211ENST00000533001 HYDINQ4G0P3 5121 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 MYADML2A6NDP7 307 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 COBLO75128 1261 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 HHIPL2Q6UWX4 724 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 WNT8BQ93098 351 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 CDX2Q99626 313 aaPredicted RBP2.34□□□□□ -2.03
KNL1-211ENST00000533001 WNT8AQ9H1J5 351 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 LEMD3Q9Y2U8 911 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 DDX49Q9Y6V7 483 aaKnown RBP2.34□□□□□ -2.03
KNL1-211ENST00000533001 MANSC4A6NHS7 340 aaPredicted RBP2.34□□□□□ -2.03
KNL1-211ENST00000533001 F6X3S4 739 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 RIMBP2O15034 1052 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 CCL5P13501 91 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 PBX2P40425 430 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 CFAP100Q494V2 611 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 ANKRD13AQ8IZ07 590 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 FOXD4L1Q9NU39 408 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 YBX2Q9Y2T7 364 aaKnown RBP2.34□□□□□ -2.03
KNL1-211ENST00000533001 TICRRQ7Z2Z1 1910 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 PLXND1Q9Y4D7 1925 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 TCERG1O14776 1098 aaKnown RBP2.34□□□□□ -2.03
KNL1-211ENST00000533001 RASGRF1Q13972 1273 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 SLFNL1Q499Z3 407 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 UBE3BQ7Z3V4 1068 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 NSUN4Q96CB9 384 aaKnown RBP2.34□□□□□ -2.03
KNL1-211ENST00000533001 WDR18Q9BV38 432 aa2.34□□□□□ -2.03
KNL1-211ENST00000533001 ABCA7Q8IZY2 2146 aa2.34□□□□□ -2.04
KNL1-211ENST00000533001 PCLOQ9Y6V0 5065 aa2.34□□□□□ -2.04
KNL1-211ENST00000533001 ZNF865P0CJ78 1059 aaPredicted RBP2.34□□□□□ -2.04
KNL1-211ENST00000533001 ITGA6P23229 1130 aa2.34□□□□□ -2.04
KNL1-211ENST00000533001 ADORA1P30542 326 aa2.34□□□□□ -2.04
KNL1-211ENST00000533001 GTF2IP78347 998 aa2.34□□□□□ -2.04
KNL1-211ENST00000533001 ADAM17P78536 824 aa2.34□□□□□ -2.04
KNL1-211ENST00000533001 FAAP100Q0VG06 881 aa2.34□□□□□ -2.04
KNL1-211ENST00000533001 FAM110CQ1W6H9 321 aa2.34□□□□□ -2.04
KNL1-211ENST00000533001 TRIM71Q2Q1W2 868 aaKnown RBP2.34□□□□□ -2.04
KNL1-211ENST00000533001 ERO1BQ86YB8 467 aa2.34□□□□□ -2.04
KNL1-211ENST00000533001 EPHX3Q9H6B9 360 aa2.34□□□□□ -2.04
KNL1-211ENST00000533001 SSUH2Q9Y2M2 353 aa2.34□□□□□ -2.04
KNL1-211ENST00000533001 PRKDCP78527 4128 aaKnown RBP2.34□□□□□ -2.04
KNL1-211ENST00000533001 GRK4P32298 578 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 EIF6P56537 245 aaKnown RBP2.33□□□□□ -2.04
KNL1-211ENST00000533001 TCF15Q12870 199 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 JDP2Q8WYK2 163 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 RBM17Q96I25 401 aaKnown RBP2.33□□□□□ -2.04
KNL1-211ENST00000533001 RIPK3Q9Y572 518 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 GREB1Q4ZG55 1949 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 CLRN2A0PK11 232 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 KIAA0355O15063 1070 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 CHRM1P11229 460 aaPredicted RBP2.33□□□□□ -2.04
KNL1-211ENST00000533001 TAL1P17542 331 aaPredicted RBP2.33□□□□□ -2.04
KNL1-211ENST00000533001 ATP2B4P23634 1241 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 FAM151AQ8WW52 585 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 IFT57Q9NWB7 429 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 TRMT112Q9UI30 125 aaKnown RBP2.33□□□□□ -2.04
KNL1-211ENST00000533001 GNEQ9Y223 722 aaKnown RBP2.33□□□□□ -2.04
KNL1-211ENST00000533001 PTPRBP23467 1997 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 CREBBPQ92793 2442 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 FAM196BA6NMK8 535 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 UFL1O94874 794 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 SNAI1O95863 264 aaPredicted RBP2.33□□□□□ -2.04
KNL1-211ENST00000533001 INHAP05111 366 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 FLIIQ13045 1269 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 MKRN3Q13064 507 aaKnown RBP2.33□□□□□ -2.04
KNL1-211ENST00000533001 GRB14Q14449 540 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 TDHQ8IZJ6 230 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 ZNF687Q8N1G0 1237 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 ANKLE1Q8NAG6 615 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 ASIC4Q96FT7 647 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 COPRSQ9NQ92 184 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 CPA4Q9UI42 421 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 ICE1Q9Y2F5 2266 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 F8P00451 2351 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 APAF1O14727 1248 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 LGR5O75473 907 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 RLBP1P12271 317 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 CCND3P30281 292 aaPredicted RBP2.33□□□□□ -2.04
KNL1-211ENST00000533001 SHMT1P34896 483 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 PHKA1P46020 1223 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 PPP4CP60510 307 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 POLA2Q14181 598 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 KRT40Q6A162 431 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 DHX38Q92620 1227 aaKnown RBP2.33□□□□□ -2.04
KNL1-211ENST00000533001 NBPF3Q9H094 633 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 EFCC1Q9HA90 598 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 TELO2Q9Y4R8 837 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 DOCK9Q9BZ29 2069 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 ANK1P16157 1881 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms