RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 PPFIA1Q13136 1202 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 PSMD2Q13200 908 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 DBN1Q16643 649 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 FAM173BQ6P4H8 233 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 CCDC82Q8N4S0 544 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 ARFGAP2Q8N6H7 521 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 CPLX3Q8WVH0 158 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 USP42Q9H9J4 1324 aaKnown RBP7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 SCP2P22307 547 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 CYP7A1P22680 504 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 HIBADHP31937 336 aaKnown RBP7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 DDR1Q08345 913 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 SPECC1Q5M775 1068 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 SMARCC2Q8TAQ2 1214 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 XPO4Q9C0E2 1151 aaKnown RBP7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 RIPOR2Q9Y4F9 1068 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 UTRNP46939 3433 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 ERVV-1B6SEH8 477 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 HIP1O00291 1037 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 PPEF1O14829 653 aaPredicted RBP7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 CCDC144BQ3MJ40 725 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 PLA2G4DQ86XP0 818 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 CCDC144CPQ8IYA2 1237 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 TTLL6Q8N841 843 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 MXD3Q9BW11 206 aa7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 ZNHIT6Q9NWK9 470 aaKnown RBP7.64□□□□□ -1.19
TGFBR3-209ENST00000532540 TTC36A6NLP5 189 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 CHGBP05060 677 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 ZAP70P43403 619 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 IKQ13123 557 aaPredicted RBP7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 TRIM29Q14134 588 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 TNNI3KQ59H18 835 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 TTC6Q86TZ1 520 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 OGFOD1Q8N543 542 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 ZNF513Q8N8E2 541 aaPredicted RBP7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 TBC1D31Q96DN5 1066 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 FPGT-TNNI3KV9GXZ4 949 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 SLIT2O94813 1529 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 TADA3O75528 432 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 GLRX3O76003 335 aaKnown RBP7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 PTPN12Q05209 780 aaKnown RBP7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 TRAF1Q13077 416 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 CASP8Q14790 479 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 DALRD3Q5D0E6 543 aaKnown RBP7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 SRGAP1Q7Z6B7 1085 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 MAGEB6Q8N7X4 407 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 MIPOL1Q8TD10 442 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 LEO1Q8WVC0 666 aaPredicted RBP7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 HMGB2P26583 209 aaKnown RBP7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 ALDH1B1P30837 517 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 CACNB3P54284 484 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 CRYMQ14894 314 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 AOC3Q16853 763 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 NFXL1Q6ZNB6 911 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 RNF168Q8IYW5 571 aaPredicted RBP7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 MRPS27Q92552 414 aaKnown RBP7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 SPDL1Q96EA4 605 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 LRRC2Q9BYS8 371 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 FHDC1Q9C0D6 1143 aaPredicted RBP7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 SAP30BPQ9UHR5 308 aaKnown RBP7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 SAMM50Q9Y512 469 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 DISP2A7MBM2 1401 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 KIF1AQ12756 1690 aa7.63□□□□□ -1.19
TGFBR3-209ENST00000532540 H7C1W4 665 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 PLSCR1O15162 318 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 POLR3DP05423 398 aaPredicted RBP7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 FANCCQ00597 558 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 MAP3K12Q12852 859 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 PDCD2Q16342 344 aaPredicted RBP7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 WHAMMP3Q1A5X7 153 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 SPECC1LQ69YQ0 1117 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 CLEC4GQ6UXB4 293 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 NYAP1Q6ZVC0 841 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 MAATS1Q7Z4T9 603 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 SEC62Q99442 399 aaKnown RBP7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 ISCA1Q9BUE6 129 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 PIM2Q9P1W9 311 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 CLRN2A0PK11 232 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 CHMLP26374 656 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 PAFAH1B1P43034 410 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 SEMA3FQ13275 785 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 LRRC23Q53EV4 343 aaPredicted RBP7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 MFSD14BQ5SR56 506 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 FAM43BQ6ZT52 329 aaPredicted RBP7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 CHST3Q7LGC8 479 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 LMNTD2Q8IXW0 634 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 ZNF446Q9NWS9 450 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 FBXO3Q9UK99 471 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 PPP2R2CQ9Y2T4 447 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 NCAPD2Q15021 1401 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 KLRK1P26718 216 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 ACTN3Q08043 901 aaPredicted RBP7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 IMMTQ16891 758 aaKnown RBP7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 PNMA8AQ86V59 439 aaPredicted RBP7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 IQUBQ8NA54 791 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 CNKSR1Q969H4 720 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 CAMKK2Q96RR4 588 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 NAPGQ99747 312 aaPredicted RBP7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 EPC1Q9H2F5 836 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms