RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 RASA1P20936 1047 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 RCAN1P53805 252 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 SLC39A14Q15043 492 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 TMTC3Q6ZXV5 915 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 DEFB132Q7Z7B7 95 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 AMOTL1Q8IY63 956 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 STAG2Q8N3U4 1231 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 CTCFLQ8NI51 663 aaPredicted RBP17.55■□□□□ 0.4
SRPRA-206ENST00000532259 FAM200AQ8TCP9 573 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 TBC1D22AQ8WUA7 517 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 STX8Q9UNK0 236 aa17.55■□□□□ 0.4
SRPRA-206ENST00000532259 TTF2Q9UNY4 1162 aaKnown RBP17.55■□□□□ 0.4
SRPRA-206ENST00000532259 GAKO14976 1311 aa17.54■□□□□ 0.4
SRPRA-206ENST00000532259 TMED8Q6PL24 325 aaPredicted RBP17.54■□□□□ 0.4
SRPRA-206ENST00000532259 ZNF830Q96NB3 372 aaPredicted RBP17.54■□□□□ 0.4
SRPRA-206ENST00000532259 RNF26Q9BY78 433 aaPredicted RBP17.54■□□□□ 0.4
SRPRA-206ENST00000532259 CABP5Q9NP86 173 aa17.54■□□□□ 0.4
SRPRA-206ENST00000532259 NAV1Q8NEY1 1877 aa17.54■□□□□ 0.4
SRPRA-206ENST00000532259 DDX4Q9NQI0 724 aaKnown RBP17.54■□□□□ 0.4
SRPRA-206ENST00000532259 SLX4Q8IY92 1834 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 DLEC1Q9Y238 1755 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 DDAH1O94760 285 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 PFKFB1P16118 471 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 CDK8P49336 464 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 GRIN1Q05586 938 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 UVSSAQ2YD98 709 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 C11orf57Q6ZUT1 292 aaPredicted RBP17.53■□□□□ 0.4
SRPRA-206ENST00000532259 ZNF444Q8N0Y2 327 aaPredicted RBP17.53■□□□□ 0.4
SRPRA-206ENST00000532259 FAM163AQ96GL9 167 aaPredicted RBP17.53■□□□□ 0.4
SRPRA-206ENST00000532259 KAT14Q9H8E8 782 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 ADAMTSL1Q8N6G6 1762 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 CNTNAP5Q8WYK1 1306 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 H0YIN7 160 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 BIN1O00499 593 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 ZNF165P49910 485 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 ISM2Q6H9L7 571 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 PNMA1Q8ND90 353 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 CPVLQ9H3G5 476 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 PCDHB6Q9Y5E3 794 aa17.53■□□□□ 0.4
SRPRA-206ENST00000532259 ROBO3Q96MS0 1386 aa17.52■□□□□ 0.4
SRPRA-206ENST00000532259 WNT7AO00755 349 aa17.52■□□□□ 0.4
SRPRA-206ENST00000532259 SHC4Q6S5L8 630 aa17.52■□□□□ 0.4
SRPRA-206ENST00000532259 SPC24Q8NBT2 197 aa17.52■□□□□ 0.4
SRPRA-206ENST00000532259 A0A1W2PQ27 194 aa17.52■□□□□ 0.39
SRPRA-206ENST00000532259 A0A1W2PQ64 194 aa17.52■□□□□ 0.39
SRPRA-206ENST00000532259 A0A1W2PQD8 194 aa17.52■□□□□ 0.39
SRPRA-206ENST00000532259 PRPF3O43395 683 aaKnown RBP17.52■□□□□ 0.39
SRPRA-206ENST00000532259 ZNF202O95125 648 aa17.52■□□□□ 0.39
SRPRA-206ENST00000532259 SLC35G1Q2M3R5 365 aa17.52■□□□□ 0.39
SRPRA-206ENST00000532259 TMX4Q9H1E5 349 aaPredicted RBP17.52■□□□□ 0.39
SRPRA-206ENST00000532259 GOLGA8HP0CJ92 632 aa17.51■□□□□ 0.39
SRPRA-206ENST00000532259 HMGB2P26583 209 aaKnown RBP17.51■□□□□ 0.39
SRPRA-206ENST00000532259 ZSCAN30Q86W11 494 aa17.51■□□□□ 0.39
SRPRA-206ENST00000532259 RBM28Q9NW13 759 aaKnown RBP17.51■□□□□ 0.39
SRPRA-206ENST00000532259 DDX60LQ5H9U9 1706 aaKnown RBP17.51■□□□□ 0.39
SRPRA-206ENST00000532259 SNED1Q8TER0 1413 aa17.51■□□□□ 0.39
SRPRA-206ENST00000532259 CALM1P0DP23 149 aa17.5■□□□□ 0.39
SRPRA-206ENST00000532259 CALM2P0DP24 149 aa17.5■□□□□ 0.39
SRPRA-206ENST00000532259 CALM3P0DP25 149 aa17.5■□□□□ 0.39
SRPRA-206ENST00000532259 MSNP26038 577 aaKnown RBP17.5■□□□□ 0.39
SRPRA-206ENST00000532259 CACNB3P54284 484 aa17.5■□□□□ 0.39
SRPRA-206ENST00000532259 NPY5RQ15761 445 aa17.5■□□□□ 0.39
SRPRA-206ENST00000532259 CLEC10AQ8IUN9 316 aa17.5■□□□□ 0.39
SRPRA-206ENST00000532259 KIAA0825Q8IV33 1275 aa17.5■□□□□ 0.39
SRPRA-206ENST00000532259 EYA3Q99504 573 aa17.5■□□□□ 0.39
SRPRA-206ENST00000532259 SRCAPQ6ZRS2 3230 aa17.5■□□□□ 0.39
SRPRA-206ENST00000532259 C16orf86Q6ZW13 317 aa17.5■□□□□ 0.39
SRPRA-206ENST00000532259 GPKOWQ92917 476 aaPredicted RBP eCLIP17.5■□□□□ 0.39
SRPRA-206ENST00000532259 TMEM47Q9BQJ4 181 aa17.5■□□□□ 0.39
SRPRA-206ENST00000532259 PHF20Q9BVI0 1012 aa17.5■□□□□ 0.39
SRPRA-206ENST00000532259 FOXP1Q9H334 677 aaPredicted RBP17.5■□□□□ 0.39
SRPRA-206ENST00000532259 PPP2R5BQ15173 497 aa17.49■□□□□ 0.39
SRPRA-206ENST00000532259 DGKHQ86XP1 1220 aa17.49■□□□□ 0.39
SRPRA-206ENST00000532259 STK32BQ9NY57 414 aa17.49■□□□□ 0.39
SRPRA-206ENST00000532259 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.49■□□□□ 0.39
SRPRA-206ENST00000532259 MYH1P12882 1939 aa17.49■□□□□ 0.39
SRPRA-206ENST00000532259 CMA1P23946 247 aa17.49■□□□□ 0.39
SRPRA-206ENST00000532259 NFIAQ12857 509 aa17.49■□□□□ 0.39
SRPRA-206ENST00000532259 AOC3Q16853 763 aa17.49■□□□□ 0.39
SRPRA-206ENST00000532259 RGS22Q8NE09 1264 aa17.49■□□□□ 0.39
SRPRA-206ENST00000532259 USP40Q9NVE5 1235 aa17.49■□□□□ 0.39
SRPRA-206ENST00000532259 SCN9AQ15858 1988 aa17.49■□□□□ 0.39
SRPRA-206ENST00000532259 PLCG2P16885 1265 aa17.48■□□□□ 0.39
SRPRA-206ENST00000532259 XBP1P17861 261 aa17.48■□□□□ 0.39
SRPRA-206ENST00000532259 SYKP43405 635 aa17.48■□□□□ 0.39
SRPRA-206ENST00000532259 ZFPM1Q8IX07 1006 aa17.48■□□□□ 0.39
SRPRA-206ENST00000532259 SLF2Q8IX21 1173 aa17.48■□□□□ 0.39
SRPRA-206ENST00000532259 MAD2L2Q9UI95 211 aa17.48■□□□□ 0.39
SRPRA-206ENST00000532259 CTAGE5O15320 804 aa17.48■□□□□ 0.39
SRPRA-206ENST00000532259 EIF6P56537 245 aaKnown RBP17.48■□□□□ 0.39
SRPRA-206ENST00000532259 APOBEC3HQ6NTF7 200 aaKnown RBP17.48■□□□□ 0.39
SRPRA-206ENST00000532259 CEP95Q96GE4 821 aa17.48■□□□□ 0.39
SRPRA-206ENST00000532259 CCDC39Q9UFE4 941 aa17.48■□□□□ 0.39
SRPRA-206ENST00000532259 CYTH3O43739 400 aa17.47■□□□□ 0.39
SRPRA-206ENST00000532259 KRT2P35908 639 aa17.47■□□□□ 0.39
SRPRA-206ENST00000532259 STX1AQ16623 288 aa17.47■□□□□ 0.39
SRPRA-206ENST00000532259 CDC42EP5Q6NZY7 148 aa17.47■□□□□ 0.39
SRPRA-206ENST00000532259 JMYQ8N9B5 988 aa17.47■□□□□ 0.39
SRPRA-206ENST00000532259 TTC12Q9H892 705 aaPredicted RBP17.47■□□□□ 0.39
SRPRA-206ENST00000532259 C21orf2O43822 256 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms