RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 ARID4AP29374 1257 aaPredicted RBP11.05□□□□□ -0.64
USF1-210ENST00000531842 EPHB4P54760 987 aa11.05□□□□□ -0.64
USF1-210ENST00000531842 GSTO1P78417 241 aa11.05□□□□□ -0.64
USF1-210ENST00000531842 TRIM60Q495X7 471 aa11.05□□□□□ -0.64
USF1-210ENST00000531842 USP38Q8NB14 1042 aa11.05□□□□□ -0.64
USF1-210ENST00000531842 PIH1D3Q9NQM4 214 aaKnown RBP11.05□□□□□ -0.64
USF1-210ENST00000531842 PLXNA1Q9UIW2 1896 aa11.05□□□□□ -0.64
USF1-210ENST00000531842 REV3LO60673 3130 aa11.05□□□□□ -0.64
USF1-210ENST00000531842 NAV1Q8NEY1 1877 aa11.04□□□□□ -0.64
USF1-210ENST00000531842 MYH8P13535 1937 aa11.04□□□□□ -0.64
USF1-210ENST00000531842 TRIM43BA6NCK2 446 aa11.04□□□□□ -0.64
USF1-210ENST00000531842 C19orf81C9J6K1 198 aa11.04□□□□□ -0.64
USF1-210ENST00000531842 CYP2E1P05181 493 aaPredicted RBP11.04□□□□□ -0.64
USF1-210ENST00000531842 PTPREP23469 700 aa11.04□□□□□ -0.64
USF1-210ENST00000531842 NAA16Q6N069 864 aaPredicted RBP11.04□□□□□ -0.64
USF1-210ENST00000531842 MIGA1Q8NAN2 632 aa11.04□□□□□ -0.64
USF1-210ENST00000531842 TRIM43Q96BQ3 446 aaPredicted RBP11.04□□□□□ -0.64
USF1-210ENST00000531842 DBNDD2Q9BQY9 259 aa11.04□□□□□ -0.64
USF1-210ENST00000531842 TBC1D2Q9BYX2 928 aa11.04□□□□□ -0.64
USF1-210ENST00000531842 GBF1Q92538 1859 aa11.04□□□□□ -0.64
USF1-210ENST00000531842 E9PSI1 815 aa11.03□□□□□ -0.64
USF1-210ENST00000531842 ZBTB22O15209 634 aa11.03□□□□□ -0.64
USF1-210ENST00000531842 CYBAP13498 195 aa11.03□□□□□ -0.64
USF1-210ENST00000531842 ZAP70P43403 619 aa11.03□□□□□ -0.64
USF1-210ENST00000531842 ATP2B2Q01814 1243 aa11.03□□□□□ -0.64
USF1-210ENST00000531842 RAB3GAP1Q15042 981 aa11.03□□□□□ -0.64
USF1-210ENST00000531842 ALDH1L2Q3SY69 923 aa11.03□□□□□ -0.64
USF1-210ENST00000531842 MFSD14CQ5VZR4 134 aa11.03□□□□□ -0.64
USF1-210ENST00000531842 USP17L2Q6R6M4 530 aa11.03□□□□□ -0.64
USF1-210ENST00000531842 SLC39A5Q6ZMH5 540 aa11.03□□□□□ -0.64
USF1-210ENST00000531842 METTL16Q86W50 562 aaKnown RBP11.03□□□□□ -0.64
USF1-210ENST00000531842 TRMT44Q8IYL2 757 aaKnown RBP11.03□□□□□ -0.64
USF1-210ENST00000531842 FEZ1Q99689 392 aa11.03□□□□□ -0.64
USF1-210ENST00000531842 TRIM34Q9BYJ4 488 aa11.03□□□□□ -0.64
USF1-210ENST00000531842 PDLIM7Q9NR12 457 aa11.03□□□□□ -0.64
USF1-210ENST00000531842 TLR7Q9NYK1 1049 aaKnown RBP11.03□□□□□ -0.64
USF1-210ENST00000531842 AKAP2Q9Y2D5 859 aa11.03□□□□□ -0.64
USF1-210ENST00000531842 CHD9Q3L8U1 2897 aa11.03□□□□□ -0.64
USF1-210ENST00000531842 A0A0G2JMZ2 1700 aa11.03□□□□□ -0.64
USF1-210ENST00000531842 TCF20Q9UGU0 1960 aaKnown RBP11.03□□□□□ -0.64
USF1-210ENST00000531842 BDP1A6H8Y1 2624 aa11.02□□□□□ -0.65
USF1-210ENST00000531842 SPDYE16A6NNV3 312 aaPredicted RBP11.02□□□□□ -0.65
USF1-210ENST00000531842 COBLO75128 1261 aa11.02□□□□□ -0.65
USF1-210ENST00000531842 FOSL2P15408 326 aa11.02□□□□□ -0.65
USF1-210ENST00000531842 VCAM1P19320 739 aa11.02□□□□□ -0.65
USF1-210ENST00000531842 ADCYAP1R1P41586 468 aa11.02□□□□□ -0.65
USF1-210ENST00000531842 KIAA1755Q5JYT7 1200 aa11.02□□□□□ -0.65
USF1-210ENST00000531842 CATSPERGQ6ZRH7 1159 aa11.02□□□□□ -0.65
USF1-210ENST00000531842 LPAR1Q92633 364 aa11.02□□□□□ -0.65
USF1-210ENST00000531842 LENG1Q96BZ8 264 aaPredicted RBP11.02□□□□□ -0.65
USF1-210ENST00000531842 NOL10Q9BSC4 688 aaKnown RBP11.02□□□□□ -0.65
USF1-210ENST00000531842 DHX36Q9H2U1 1008 aaKnown RBP11.02□□□□□ -0.65
USF1-210ENST00000531842 RPAP3Q9H6T3 665 aaPredicted RBP11.02□□□□□ -0.65
USF1-210ENST00000531842 PRKAG2Q9UGJ0 569 aa11.02□□□□□ -0.65
USF1-210ENST00000531842 RABGAP1Q9Y3P9 1069 aa11.02□□□□□ -0.65
USF1-210ENST00000531842 BAZ2AQ9UIF9 1905 aaKnown RBP11.01□□□□□ -0.65
USF1-210ENST00000531842 ZNF236Q9UL36 1845 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 SLC15A5A6NIM6 579 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 USP17L15C9J2P7 530 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 USP17L13C9JLJ4 530 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 USP17L11C9JVI0 530 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 USP17L18D6R9N7 530 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 USP17L22D6RA61 530 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 USP17L17D6RBQ6 530 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 USP17L19D6RCP7 530 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 USP17L20D6RJB6 530 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 DNM1LO00429 736 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 IGHA2P01877 340 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 GUCY1A2P33402 732 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 PPP4CP60510 307 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 USP17L24Q0WX57 530 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 GRB14Q14449 540 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 GRIN2CQ14957 1233 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 FAM47AQ5JRC9 791 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 TTC39AQ5SRH9 613 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 SAMD1Q6SPF0 538 aaPredicted RBP11.01□□□□□ -0.65
USF1-210ENST00000531842 CLEC10AQ8IUN9 316 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 FOXP4Q8IVH2 680 aaPredicted RBP11.01□□□□□ -0.65
USF1-210ENST00000531842 NCOR1O75376 2440 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 MCM3APO60318 1980 aa11.01□□□□□ -0.65
USF1-210ENST00000531842 A0A1W2PRG0 241 aa11□□□□□ -0.65
USF1-210ENST00000531842 BAG3O95817 575 aa11□□□□□ -0.65
USF1-210ENST00000531842 CYP7A1P22680 504 aa11□□□□□ -0.65
USF1-210ENST00000531842 ADORA2AP29274 412 aa11□□□□□ -0.65
USF1-210ENST00000531842 PLCD1P51178 756 aa11□□□□□ -0.65
USF1-210ENST00000531842 MTX1Q13505 466 aa11□□□□□ -0.65
USF1-210ENST00000531842 PPM1EQ8WY54 764 aa11□□□□□ -0.65
USF1-210ENST00000531842 MOV10L1Q9BXT6 1211 aaKnown RBP11□□□□□ -0.65
USF1-210ENST00000531842 SMIM22K7EJ46 135 aa10.99□□□□□ -0.65
USF1-210ENST00000531842 MAP4K4O95819 1239 aaPredicted RBP10.99□□□□□ -0.65
USF1-210ENST00000531842 HOXC6P09630 235 aa10.99□□□□□ -0.65
USF1-210ENST00000531842 TAL1P17542 331 aaPredicted RBP10.99□□□□□ -0.65
USF1-210ENST00000531842 COL9A1P20849 921 aa10.99□□□□□ -0.65
USF1-210ENST00000531842 SHMT1P34896 483 aa10.99□□□□□ -0.65
USF1-210ENST00000531842 IRX5P78411 483 aaPredicted RBP10.99□□□□□ -0.65
USF1-210ENST00000531842 TLE2Q04725 743 aa10.99□□□□□ -0.65
USF1-210ENST00000531842 G3BP1Q13283 466 aaKnown RBP eCLIP10.99□□□□□ -0.65
USF1-210ENST00000531842 SEPT2Q15019 361 aa10.99□□□□□ -0.65
USF1-210ENST00000531842 LRRC41Q15345 812 aa10.99□□□□□ -0.65
USF1-210ENST00000531842 TNNI3KQ59H18 835 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms