RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 SGPL1O95470 568 aa15.83■□□□□ 0.12
SF3B2-212ENST00000531589 HMGCRP04035 888 aa15.83■□□□□ 0.12
SF3B2-212ENST00000531589 ZYXQ15942 572 aaKnown RBP15.83■□□□□ 0.12
SF3B2-212ENST00000531589 SOCS4Q8WXH5 440 aa15.83■□□□□ 0.12
SF3B2-212ENST00000531589 NUDT12Q9BQG2 462 aa15.83■□□□□ 0.12
SF3B2-212ENST00000531589 HTATIP2Q9BUP3 242 aa15.83■□□□□ 0.12
SF3B2-212ENST00000531589 UNC93B1Q9H1C4 597 aa15.83■□□□□ 0.12
SF3B2-212ENST00000531589 DCTPP1Q9H773 170 aa15.83■□□□□ 0.12
SF3B2-212ENST00000531589 GJD2Q9UKL4 321 aa15.83■□□□□ 0.12
SF3B2-212ENST00000531589 SMARCA5O60264 1052 aaPredicted RBP15.82■□□□□ 0.12
SF3B2-212ENST00000531589 ERVK-9P63128 1117 aa15.82■□□□□ 0.12
SF3B2-212ENST00000531589 ERVK-24P63145 666 aa15.82■□□□□ 0.12
SF3B2-212ENST00000531589 CCNA1P78396 465 aa15.82■□□□□ 0.12
SF3B2-212ENST00000531589 SHISA4Q96DD7 197 aa15.82■□□□□ 0.12
SF3B2-212ENST00000531589 PAGR1Q9BTK6 254 aa15.82■□□□□ 0.12
SF3B2-212ENST00000531589 CWC22Q9HCG8 908 aaKnown RBP15.82■□□□□ 0.12
SF3B2-212ENST00000531589 RBPJLQ9UBG7 517 aa15.82■□□□□ 0.12
SF3B2-212ENST00000531589 RABGAP1Q9Y3P9 1069 aa15.82■□□□□ 0.12
SF3B2-212ENST00000531589 GLRX3O76003 335 aaKnown RBP15.81■□□□□ 0.12
SF3B2-212ENST00000531589 TFRCP02786 760 aaKnown RBP15.81■□□□□ 0.12
SF3B2-212ENST00000531589 CATSPERGQ6ZRH7 1159 aa15.81■□□□□ 0.12
SF3B2-212ENST00000531589 TMEM179Q6ZVK1 233 aa15.81■□□□□ 0.12
SF3B2-212ENST00000531589 TRMT44Q8IYL2 757 aaKnown RBP15.81■□□□□ 0.12
SF3B2-212ENST00000531589 ACER1Q8TDN7 264 aa15.81■□□□□ 0.12
SF3B2-212ENST00000531589 CCDC17Q96LX7 622 aa15.81■□□□□ 0.12
SF3B2-212ENST00000531589 DEFB118Q96PH6 123 aa15.81■□□□□ 0.12
SF3B2-212ENST00000531589 RPTORQ8N122 1335 aa15.8■□□□□ 0.12
SF3B2-212ENST00000531589 XRCC5P13010 732 aaKnown RBP15.8■□□□□ 0.12
SF3B2-212ENST00000531589 VCAM1P19320 739 aa15.8■□□□□ 0.12
SF3B2-212ENST00000531589 SEPT2Q15019 361 aa15.8■□□□□ 0.12
SF3B2-212ENST00000531589 LRRFIP1Q32MZ4 808 aaKnown RBP15.8■□□□□ 0.12
SF3B2-212ENST00000531589 DPF3Q92784 378 aa15.8■□□□□ 0.12
SF3B2-212ENST00000531589 SH2D4AQ9H788 454 aa15.8■□□□□ 0.12
SF3B2-212ENST00000531589 TXNRD2Q9NNW7 524 aa15.8■□□□□ 0.12
SF3B2-212ENST00000531589 HMX1Q9NP08 348 aaPredicted RBP15.8■□□□□ 0.12
SF3B2-212ENST00000531589 PAK6Q9NQU5 681 aaPredicted RBP15.8■□□□□ 0.12
SF3B2-212ENST00000531589 SLC4A4Q9Y6R1 1079 aa15.8■□□□□ 0.12
SF3B2-212ENST00000531589 USP17L12C9JPN9 530 aa15.79■□□□□ 0.12
SF3B2-212ENST00000531589 USP17L21D6R901 530 aa15.79■□□□□ 0.12
SF3B2-212ENST00000531589 PRKAB2O43741 272 aa15.79■□□□□ 0.12
SF3B2-212ENST00000531589 FARP2O94887 1054 aaPredicted RBP15.79■□□□□ 0.12
SF3B2-212ENST00000531589 CYP2B6P20813 491 aa15.79■□□□□ 0.12
SF3B2-212ENST00000531589 Q3C1V9 767 aa15.79■□□□□ 0.12
SF3B2-212ENST00000531589 C12orf60Q5U649 245 aa15.79■□□□□ 0.12
SF3B2-212ENST00000531589 LBX2Q6XYB7 198 aa15.79■□□□□ 0.12
SF3B2-212ENST00000531589 PLEKHH3Q7Z736 793 aa15.79■□□□□ 0.12
SF3B2-212ENST00000531589 KBTBD3Q8NAB2 608 aa15.79■□□□□ 0.12
SF3B2-212ENST00000531589 RPAP3Q9H6T3 665 aaPredicted RBP15.79■□□□□ 0.12
SF3B2-212ENST00000531589 ARHGEF10LQ9HCE6 1279 aa15.79■□□□□ 0.12
SF3B2-212ENST00000531589 HOXC10Q9NYD6 342 aa15.79■□□□□ 0.12
SF3B2-212ENST00000531589 NAV1Q8NEY1 1877 aa15.79■□□□□ 0.12
SF3B2-212ENST00000531589 DDX60LQ5H9U9 1706 aaKnown RBP15.78■□□□□ 0.12
SF3B2-212ENST00000531589 ZFYP08048 801 aaPredicted RBP15.78■□□□□ 0.12
SF3B2-212ENST00000531589 CYP2D6P10635 497 aa15.78■□□□□ 0.12
SF3B2-212ENST00000531589 GUCY1A2P33402 732 aa15.78■□□□□ 0.12
SF3B2-212ENST00000531589 RGS2P41220 211 aa15.78■□□□□ 0.12
SF3B2-212ENST00000531589 GPR142Q7Z601 462 aa15.78■□□□□ 0.12
SF3B2-212ENST00000531589 UBE2Q1Q7Z7E8 422 aa15.78■□□□□ 0.12
SF3B2-212ENST00000531589 LPAR1Q92633 364 aa15.78■□□□□ 0.12
SF3B2-212ENST00000531589 DYNLL2Q96FJ2 89 aa15.78■□□□□ 0.12
SF3B2-212ENST00000531589 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.78■□□□□ 0.12
SF3B2-212ENST00000531589 ARPP21Q9UBL0 812 aaPredicted RBP15.78■□□□□ 0.12
SF3B2-212ENST00000531589 ZBTB47Q9UFB7 747 aaPredicted RBP15.78■□□□□ 0.12
SF3B2-212ENST00000531589 TTC41PQ6P2S7 1318 aa15.77■□□□□ 0.12
SF3B2-212ENST00000531589 ERC2O15083 957 aa15.77■□□□□ 0.12
SF3B2-212ENST00000531589 CDK8P49336 464 aa15.77■□□□□ 0.12
SF3B2-212ENST00000531589 COG2Q14746 738 aa15.77■□□□□ 0.12
SF3B2-212ENST00000531589 SLFNL1Q499Z3 407 aa15.77■□□□□ 0.12
SF3B2-212ENST00000531589 ANKLE1Q8NAG6 615 aa15.77■□□□□ 0.12
SF3B2-212ENST00000531589 SLC44A5Q8NCS7 719 aa15.77■□□□□ 0.12
SF3B2-212ENST00000531589 CRISPLD2Q9H0B8 497 aa15.77■□□□□ 0.12
SF3B2-212ENST00000531589 PUS7LQ9H0K6 701 aaKnown RBP15.77■□□□□ 0.12
SF3B2-212ENST00000531589 PORCNQ9H237 461 aa15.77■□□□□ 0.12
SF3B2-212ENST00000531589 NR2E3Q9Y5X4 410 aa15.77■□□□□ 0.12
SF3B2-212ENST00000531589 IVNS1ABPQ9Y6Y0 642 aa15.77■□□□□ 0.12
SF3B2-212ENST00000531589 A0A1W2PRG0 241 aa15.76■□□□□ 0.11
SF3B2-212ENST00000531589 PEX10O60683 326 aa15.76■□□□□ 0.11
SF3B2-212ENST00000531589 ZKSCAN1P17029 563 aaPredicted RBP15.76■□□□□ 0.11
SF3B2-212ENST00000531589 EVX2Q03828 476 aa15.76■□□□□ 0.11
SF3B2-212ENST00000531589 ICA1Q05084 483 aa15.76■□□□□ 0.11
SF3B2-212ENST00000531589 HABP4Q5JVS0 413 aaKnown RBP15.76■□□□□ 0.11
SF3B2-212ENST00000531589 WDR78Q5VTH9 848 aa15.76■□□□□ 0.11
SF3B2-212ENST00000531589 GIMAP6Q6P9H5 292 aa15.76■□□□□ 0.11
SF3B2-212ENST00000531589 C16orf86Q6ZW13 317 aa15.76■□□□□ 0.11
SF3B2-212ENST00000531589 TRIB2Q92519 343 aa15.76■□□□□ 0.11
SF3B2-212ENST00000531589 APPBP2Q92624 585 aa15.76■□□□□ 0.11
SF3B2-212ENST00000531589 TANGO6Q9C0B7 1094 aa15.76■□□□□ 0.11
SF3B2-212ENST00000531589 KANSL2Q9H9L4 492 aa15.76■□□□□ 0.11
SF3B2-212ENST00000531589 TMX2Q9Y320 296 aa15.76■□□□□ 0.11
SF3B2-212ENST00000531589 BRCA2P51587 3418 aa15.76■□□□□ 0.11
SF3B2-212ENST00000531589 H0YGN5 161 aa15.75■□□□□ 0.11
SF3B2-212ENST00000531589 RNF113AO15541 343 aaKnown RBP15.75■□□□□ 0.11
SF3B2-212ENST00000531589 AKR1B1P15121 316 aa15.75■□□□□ 0.11
SF3B2-212ENST00000531589 GNAT2P19087 354 aa15.75■□□□□ 0.11
SF3B2-212ENST00000531589 RRP1P56182 461 aaKnown RBP15.75■□□□□ 0.11
SF3B2-212ENST00000531589 MORN1Q5T089 497 aa15.75■□□□□ 0.11
SF3B2-212ENST00000531589 CTR9Q6PD62 1173 aa15.75■□□□□ 0.11
SF3B2-212ENST00000531589 NECAB2Q7Z6G3 386 aa15.75■□□□□ 0.11
SF3B2-212ENST00000531589 MB21D1Q8N884 522 aa15.75■□□□□ 0.11
SF3B2-212ENST00000531589 USP6NLQ92738 828 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms