RNA–Protein interactions for RNA: ENST00000531336.1

SMPD1-206, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-206ENST00000531336 CXCL11O14625 94 aa16.37■□□□□ 0.21
SMPD1-206ENST00000531336 REC8O95072 547 aa16.37■□□□□ 0.21
SMPD1-206ENST00000531336 PCP11498 1178 aaKnown RBP16.37■□□□□ 0.21
SMPD1-206ENST00000531336 HMGCS2P54868 508 aa16.37■□□□□ 0.21
SMPD1-206ENST00000531336 ATP2B2Q01814 1243 aa16.37■□□□□ 0.21
SMPD1-206ENST00000531336 DGKZQ13574 1117 aa16.37■□□□□ 0.21
SMPD1-206ENST00000531336 ZYXQ15942 572 aaKnown RBP16.37■□□□□ 0.21
SMPD1-206ENST00000531336 GADL1Q6ZQY3 521 aa16.37■□□□□ 0.21
SMPD1-206ENST00000531336 PRRT2Q7Z6L0 340 aaPredicted RBP16.37■□□□□ 0.21
SMPD1-206ENST00000531336 JMYQ8N9B5 988 aa16.37■□□□□ 0.21
SMPD1-206ENST00000531336 ACER1Q8TDN7 264 aa16.37■□□□□ 0.21
SMPD1-206ENST00000531336 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMPD1-206ENST00000531336 USP17L10C9JJH3 530 aa16.36■□□□□ 0.21
SMPD1-206ENST00000531336 FGRP09769 529 aa16.36■□□□□ 0.21
SMPD1-206ENST00000531336 REM2Q8IYK8 340 aaPredicted RBP16.36■□□□□ 0.21
SMPD1-206ENST00000531336 NEDD1Q8NHV4 660 aa16.36■□□□□ 0.21
SMPD1-206ENST00000531336 TAF6LQ9Y6J9 622 aa16.36■□□□□ 0.21
SMPD1-206ENST00000531336 TESPA1A2RU30 521 aaPredicted RBP16.35■□□□□ 0.21
SMPD1-206ENST00000531336 B4E1Z4 1266 aa16.35■□□□□ 0.21
SMPD1-206ENST00000531336 IGF2BP3O00425 579 aaKnown RBP eCLIP16.35■□□□□ 0.21
SMPD1-206ENST00000531336 SLC27A2O14975 620 aa16.35■□□□□ 0.21
SMPD1-206ENST00000531336 TM4SF4P48230 202 aa16.35■□□□□ 0.21
SMPD1-206ENST00000531336 MAP2K1Q02750 393 aaPredicted RBP16.35■□□□□ 0.21
SMPD1-206ENST00000531336 CREB3L3Q68CJ9 461 aa16.35■□□□□ 0.21
SMPD1-206ENST00000531336 IFNL1Q8IU54 200 aa16.35■□□□□ 0.21
SMPD1-206ENST00000531336 NKX2-3Q8TAU0 364 aa16.35■□□□□ 0.21
SMPD1-206ENST00000531336 ESR2Q92731 530 aa16.35■□□□□ 0.21
SMPD1-206ENST00000531336 CEP95Q96GE4 821 aa16.35■□□□□ 0.21
SMPD1-206ENST00000531336 KANSL2Q9H9L4 492 aa16.35■□□□□ 0.21
SMPD1-206ENST00000531336 ARHGEF10LQ9HCE6 1279 aa16.35■□□□□ 0.21
SMPD1-206ENST00000531336 IGKV6D-41A0A0C4DH26 115 aa16.34■□□□□ 0.21
SMPD1-206ENST00000531336 A0A1W2PRG0 241 aa16.34■□□□□ 0.21
SMPD1-206ENST00000531336 BTBD19C9JJ37 291 aa16.34■□□□□ 0.21
SMPD1-206ENST00000531336 NMT2O60551 498 aa16.34■□□□□ 0.21
SMPD1-206ENST00000531336 EEF2P13639 858 aaKnown RBP16.34■□□□□ 0.21
SMPD1-206ENST00000531336 BACE1P56817 501 aa16.34■□□□□ 0.21
SMPD1-206ENST00000531336 INHBEP58166 350 aa16.34■□□□□ 0.21
SMPD1-206ENST00000531336 MOGSQ13724 837 aa16.34■□□□□ 0.21
SMPD1-206ENST00000531336 NECTIN1Q15223 517 aa16.34■□□□□ 0.21
SMPD1-206ENST00000531336 USP17L2Q6R6M4 530 aa16.34■□□□□ 0.21
SMPD1-206ENST00000531336 STOX1Q6ZVD7 989 aa16.34■□□□□ 0.21
SMPD1-206ENST00000531336 FASTKD5Q7L8L6 764 aaKnown RBP16.34■□□□□ 0.21
SMPD1-206ENST00000531336 PTPN18Q99952 460 aa16.34■□□□□ 0.21
SMPD1-206ENST00000531336 BEGAINQ9BUH8 593 aa16.34■□□□□ 0.21
SMPD1-206ENST00000531336 KRT23Q9C075 422 aa16.34■□□□□ 0.21
SMPD1-206ENST00000531336 CNNM2Q9H8M5 875 aa16.34■□□□□ 0.21
SMPD1-206ENST00000531336 TMOD4Q9NZQ9 345 aa16.34■□□□□ 0.21
SMPD1-206ENST00000531336 C19orf81C9J6K1 198 aa16.33■□□□□ 0.2
SMPD1-206ENST00000531336 E7EWF7 191 aa16.33■□□□□ 0.2
SMPD1-206ENST00000531336 KDM4AO75164 1064 aa16.33■□□□□ 0.2
SMPD1-206ENST00000531336 TRDNQ13061 729 aa16.33■□□□□ 0.2
SMPD1-206ENST00000531336 SH3D19Q5HYK7 790 aa16.33■□□□□ 0.2
SMPD1-206ENST00000531336 RNF20Q5VTR2 975 aa16.33■□□□□ 0.2
SMPD1-206ENST00000531336 SIAH1Q8IUQ4 282 aa16.33■□□□□ 0.2
SMPD1-206ENST00000531336 FAM43AQ8N2R8 423 aa16.33■□□□□ 0.2
SMPD1-206ENST00000531336 PROCA1Q8NCQ7 364 aaPredicted RBP16.33■□□□□ 0.2
SMPD1-206ENST00000531336 KIAA1683Q9H0B3 1180 aa16.33■□□□□ 0.2
SMPD1-206ENST00000531336 SH2D4AQ9H788 454 aa16.33■□□□□ 0.2
SMPD1-206ENST00000531336 MTMR4Q9NYA4 1195 aa16.33■□□□□ 0.2
SMPD1-206ENST00000531336 RAD21O60216 631 aa16.32■□□□□ 0.2
SMPD1-206ENST00000531336 USP14P54578 494 aa16.32■□□□□ 0.2
SMPD1-206ENST00000531336 TREML2Q5T2D2 321 aa16.32■□□□□ 0.2
SMPD1-206ENST00000531336 OTUD7BQ6GQQ9 843 aa16.32■□□□□ 0.2
SMPD1-206ENST00000531336 GPAT2Q6NUI2 795 aa16.32■□□□□ 0.2
SMPD1-206ENST00000531336 RALYLQ86SE5 291 aaKnown RBP16.32■□□□□ 0.2
SMPD1-206ENST00000531336 ANKRD23Q86SG2 305 aa16.32■□□□□ 0.2
SMPD1-206ENST00000531336 LRRC47Q8N1G4 583 aaKnown RBP16.32■□□□□ 0.2
SMPD1-206ENST00000531336 ZKSCAN3Q9BRR0 538 aa16.32■□□□□ 0.2
SMPD1-206ENST00000531336 IL17RBQ9NRM6 502 aa16.32■□□□□ 0.2
SMPD1-206ENST00000531336 EMILIN3Q9NT22 766 aa16.32■□□□□ 0.2
SMPD1-206ENST00000531336 WBP1LQ9NX94 342 aa16.32■□□□□ 0.2
SMPD1-206ENST00000531336 NYAP2Q9P242 653 aa16.32■□□□□ 0.2
SMPD1-206ENST00000531336 CLIP2Q9UDT6 1046 aa16.32■□□□□ 0.2
SMPD1-206ENST00000531336 AGTPBP1Q9UPW5 1226 aa16.32■□□□□ 0.2
SMPD1-206ENST00000531336 PDHXO00330 501 aa16.31■□□□□ 0.2
SMPD1-206ENST00000531336 TRPA1O75762 1119 aa16.31■□□□□ 0.2
SMPD1-206ENST00000531336 TTLL1O95922 423 aa16.31■□□□□ 0.2
SMPD1-206ENST00000531336 HSPA1AP0DMV8 641 aaKnown RBP16.31■□□□□ 0.2
SMPD1-206ENST00000531336 HSPA1BP0DMV9 641 aaKnown RBP16.31■□□□□ 0.2
SMPD1-206ENST00000531336 C8orf34Q49A92 452 aa16.31■□□□□ 0.2
SMPD1-206ENST00000531336 NCOA7Q8NI08 942 aa16.31■□□□□ 0.2
SMPD1-206ENST00000531336 RNF186Q9NXI6 227 aa16.31■□□□□ 0.2
SMPD1-206ENST00000531336 TSKSQ9UJT2 592 aa16.31■□□□□ 0.2
SMPD1-206ENST00000531336 STX8Q9UNK0 236 aa16.31■□□□□ 0.2
SMPD1-206ENST00000531336 TMX2Q9Y320 296 aa16.31■□□□□ 0.2
SMPD1-206ENST00000531336 ALDH1A1P00352 501 aa16.3■□□□□ 0.2
SMPD1-206ENST00000531336 TAF1CQ15572 869 aaPredicted RBP16.3■□□□□ 0.2
SMPD1-206ENST00000531336 PPP4R3BQ5MIZ7 849 aa16.3■□□□□ 0.2
SMPD1-206ENST00000531336 IFFO2Q5TF58 517 aa16.3■□□□□ 0.2
SMPD1-206ENST00000531336 CYB5R4Q7L1T6 521 aa16.3■□□□□ 0.2
SMPD1-206ENST00000531336 IQCA1Q86XH1 822 aa16.3■□□□□ 0.2
SMPD1-206ENST00000531336 C12orf42Q96LP6 360 aa16.3■□□□□ 0.2
SMPD1-206ENST00000531336 VCPKMTQ9H867 229 aa16.3■□□□□ 0.2
SMPD1-206ENST00000531336 GOPCQ9HD26 462 aa16.3■□□□□ 0.2
SMPD1-206ENST00000531336 ZSWIM5Q9P217 1185 aa16.3■□□□□ 0.2
SMPD1-206ENST00000531336 PARP14Q460N5 1801 aa16.3■□□□□ 0.2
SMPD1-206ENST00000531336 ZKSCAN1P17029 563 aaPredicted RBP16.29■□□□□ 0.2
SMPD1-206ENST00000531336 VCAM1P19320 739 aa16.29■□□□□ 0.2
SMPD1-206ENST00000531336 HSPA4P34932 840 aa16.29■□□□□ 0.2
SMPD1-206ENST00000531336 NT5C2P49902 561 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms