RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 HABP4Q5JVS0 413 aaKnown RBP26.9■■□□□ 1.9
TRAPPC4-210ENST00000531290 ACER1Q8TDN7 264 aa26.9■■□□□ 1.9
TRAPPC4-210ENST00000531290 SIPA1L1O43166 1804 aa26.9■■□□□ 1.9
TRAPPC4-210ENST00000531290 H0YGN5 161 aa26.89■■□□□ 1.9
TRAPPC4-210ENST00000531290 ERVK-9P63128 1117 aa26.89■■□□□ 1.9
TRAPPC4-210ENST00000531290 ERVK-24P63145 666 aa26.89■■□□□ 1.9
TRAPPC4-210ENST00000531290 UBE2Q1Q7Z7E8 422 aa26.89■■□□□ 1.9
TRAPPC4-210ENST00000531290 NUDT12Q9BQG2 462 aa26.89■■□□□ 1.9
TRAPPC4-210ENST00000531290 PAK6Q9NQU5 681 aaPredicted RBP26.89■■□□□ 1.9
TRAPPC4-210ENST00000531290 SMARCA5O60264 1052 aaPredicted RBP26.88■■□□□ 1.89
TRAPPC4-210ENST00000531290 MBD4O95243 580 aa26.88■■□□□ 1.89
TRAPPC4-210ENST00000531290 CYP2B6P20813 491 aa26.88■■□□□ 1.89
TRAPPC4-210ENST00000531290 Q3C1V9 767 aa26.88■■□□□ 1.89
TRAPPC4-210ENST00000531290 ZSCAN25Q6NSZ9 544 aa26.88■■□□□ 1.89
TRAPPC4-210ENST00000531290 SOCS4Q8WXH5 440 aa26.88■■□□□ 1.89
TRAPPC4-210ENST00000531290 CWC22Q9HCG8 908 aaKnown RBP26.88■■□□□ 1.89
TRAPPC4-210ENST00000531290 ATP8A2Q9NTI2 1148 aa26.88■■□□□ 1.89
TRAPPC4-210ENST00000531290 LOC285556D6RIA3 1793 aa26.88■■□□□ 1.89
TRAPPC4-210ENST00000531290 SEPT2Q15019 361 aa26.87■■□□□ 1.89
TRAPPC4-210ENST00000531290 SLFNL1Q499Z3 407 aa26.87■■□□□ 1.89
TRAPPC4-210ENST00000531290 CATSPERGQ6ZRH7 1159 aa26.87■■□□□ 1.89
TRAPPC4-210ENST00000531290 DDRGK1Q96HY6 314 aa26.87■■□□□ 1.89
TRAPPC4-210ENST00000531290 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.87■■□□□ 1.89
TRAPPC4-210ENST00000531290 HMX1Q9NP08 348 aaPredicted RBP26.87■■□□□ 1.89
TRAPPC4-210ENST00000531290 SWAP70Q9UH65 585 aa26.87■■□□□ 1.89
TRAPPC4-210ENST00000531290 RABGAP1Q9Y3P9 1069 aa26.87■■□□□ 1.89
TRAPPC4-210ENST00000531290 PRKAB2O43741 272 aa26.86■■□□□ 1.89
TRAPPC4-210ENST00000531290 CYP2D6P10635 497 aa26.86■■□□□ 1.89
TRAPPC4-210ENST00000531290 VCAM1P19320 739 aa26.86■■□□□ 1.89
TRAPPC4-210ENST00000531290 UBE3CQ15386 1083 aa26.86■■□□□ 1.89
TRAPPC4-210ENST00000531290 AMOTL1Q8IY63 956 aa26.86■■□□□ 1.89
TRAPPC4-210ENST00000531290 MYO5AQ9Y4I1 1855 aaKnown RBP26.86■■□□□ 1.89
TRAPPC4-210ENST00000531290 XRCC5P13010 732 aaKnown RBP26.85■■□□□ 1.89
TRAPPC4-210ENST00000531290 GUCY1A2P33402 732 aa26.85■■□□□ 1.89
TRAPPC4-210ENST00000531290 CCNA1P78396 465 aa26.85■■□□□ 1.89
TRAPPC4-210ENST00000531290 EVX2Q03828 476 aa26.85■■□□□ 1.89
TRAPPC4-210ENST00000531290 PLEKHH3Q7Z736 793 aa26.85■■□□□ 1.89
TRAPPC4-210ENST00000531290 PORCNQ9H237 461 aa26.85■■□□□ 1.89
TRAPPC4-210ENST00000531290 ECHDC1Q9NTX5 307 aa26.85■■□□□ 1.89
TRAPPC4-210ENST00000531290 ATAD5Q96QE3 1844 aa26.85■■□□□ 1.89
TRAPPC4-210ENST00000531290 RPTORQ8N122 1335 aa26.85■■□□□ 1.89
TRAPPC4-210ENST00000531290 GPR142Q7Z601 462 aa26.84■■□□□ 1.89
TRAPPC4-210ENST00000531290 TRMT44Q8IYL2 757 aaKnown RBP26.84■■□□□ 1.89
TRAPPC4-210ENST00000531290 CRISPLD2Q9H0B8 497 aa26.84■■□□□ 1.89
TRAPPC4-210ENST00000531290 RPAP3Q9H6T3 665 aaPredicted RBP26.84■■□□□ 1.89
TRAPPC4-210ENST00000531290 NR2E3Q9Y5X4 410 aa26.84■■□□□ 1.89
TRAPPC4-210ENST00000531290 FOCADQ5VW36 1801 aa26.83■■□□□ 1.89
TRAPPC4-210ENST00000531290 GLRX3O76003 335 aaKnown RBP26.83■■□□□ 1.89
TRAPPC4-210ENST00000531290 TRIM32Q13049 653 aa26.83■■□□□ 1.89
TRAPPC4-210ENST00000531290 POTEEQ6S8J3 1075 aa26.83■■□□□ 1.89
TRAPPC4-210ENST00000531290 TMEM179Q6ZVK1 233 aa26.83■■□□□ 1.89
TRAPPC4-210ENST00000531290 SLC44A5Q8NCS7 719 aa26.83■■□□□ 1.89
TRAPPC4-210ENST00000531290 TRIB2Q92519 343 aa26.83■■□□□ 1.89
TRAPPC4-210ENST00000531290 DYNLL2Q96FJ2 89 aa26.83■■□□□ 1.89
TRAPPC4-210ENST00000531290 GPATCH3Q96I76 525 aa26.83■■□□□ 1.89
TRAPPC4-210ENST00000531290 DCTPP1Q9H773 170 aa26.83■■□□□ 1.89
TRAPPC4-210ENST00000531290 COLQQ9Y215 455 aaPredicted RBP26.83■■□□□ 1.89
TRAPPC4-210ENST00000531290 RGS2P41220 211 aa26.82■■□□□ 1.88
TRAPPC4-210ENST00000531290 SLC4A4Q9Y6R1 1079 aa26.82■■□□□ 1.88
TRAPPC4-210ENST00000531290 MGAMO43451 1857 aa26.81■■□□□ 1.88
TRAPPC4-210ENST00000531290 USP17L12C9JPN9 530 aa26.81■■□□□ 1.88
TRAPPC4-210ENST00000531290 USP17L21D6R901 530 aa26.81■■□□□ 1.88
TRAPPC4-210ENST00000531290 CHGBP05060 677 aa26.81■■□□□ 1.88
TRAPPC4-210ENST00000531290 ZKSCAN1P17029 563 aaPredicted RBP26.81■■□□□ 1.88
TRAPPC4-210ENST00000531290 C12orf60Q5U649 245 aa26.81■■□□□ 1.88
TRAPPC4-210ENST00000531290 A0A1W2PRG0 241 aa26.8■■□□□ 1.88
TRAPPC4-210ENST00000531290 CNMDO75829 334 aa26.8■■□□□ 1.88
TRAPPC4-210ENST00000531290 MORN1Q5T089 497 aa26.8■■□□□ 1.88
TRAPPC4-210ENST00000531290 WDR78Q5VTH9 848 aa26.8■■□□□ 1.88
TRAPPC4-210ENST00000531290 LBX2Q6XYB7 198 aa26.8■■□□□ 1.88
TRAPPC4-210ENST00000531290 NECAB2Q7Z6G3 386 aa26.8■■□□□ 1.88
TRAPPC4-210ENST00000531290 USP6NLQ92738 828 aa26.8■■□□□ 1.88
TRAPPC4-210ENST00000531290 PAWRQ96IZ0 340 aaKnown RBP26.8■■□□□ 1.88
TRAPPC4-210ENST00000531290 CCDC17Q96LX7 622 aa26.8■■□□□ 1.88
TRAPPC4-210ENST00000531290 HOXC10Q9NYD6 342 aa26.8■■□□□ 1.88
TRAPPC4-210ENST00000531290 CDK5RAP2Q96SN8 1893 aa26.8■■□□□ 1.88
TRAPPC4-210ENST00000531290 PRKAR2AP13861 404 aaKnown RBP26.79■■□□□ 1.88
TRAPPC4-210ENST00000531290 COG2Q14746 738 aa26.79■■□□□ 1.88
TRAPPC4-210ENST00000531290 ANKLE1Q8NAG6 615 aa26.79■■□□□ 1.88
TRAPPC4-210ENST00000531290 PUS7LQ9H0K6 701 aaKnown RBP26.79■■□□□ 1.88
TRAPPC4-210ENST00000531290 ARHGEF10LQ9HCE6 1279 aa26.79■■□□□ 1.88
TRAPPC4-210ENST00000531290 PCDH10Q9P2E7 1040 aa26.79■■□□□ 1.88
TRAPPC4-210ENST00000531290 CYP2D7A0A087X1C5 515 aa26.78■■□□□ 1.88
TRAPPC4-210ENST00000531290 CDK8P49336 464 aa26.78■■□□□ 1.88
TRAPPC4-210ENST00000531290 TANGO6Q9C0B7 1094 aa26.78■■□□□ 1.88
TRAPPC4-210ENST00000531290 SH2D4AQ9H788 454 aa26.78■■□□□ 1.88
TRAPPC4-210ENST00000531290 MYH1P12882 1939 aa26.78■■□□□ 1.88
TRAPPC4-210ENST00000531290 SPDYE16A6NNV3 312 aaPredicted RBP26.77■■□□□ 1.88
TRAPPC4-210ENST00000531290 EVI5O60447 810 aa26.77■■□□□ 1.88
TRAPPC4-210ENST00000531290 AKR1B1P15121 316 aa26.77■■□□□ 1.88
TRAPPC4-210ENST00000531290 MAP2K5Q13163 448 aa26.77■■□□□ 1.88
TRAPPC4-210ENST00000531290 MAP3K21Q5TCX8 1036 aa26.77■■□□□ 1.88
TRAPPC4-210ENST00000531290 APBA2Q99767 749 aa26.77■■□□□ 1.88
TRAPPC4-210ENST00000531290 BTBD7Q9P203 1132 aa26.77■■□□□ 1.88
TRAPPC4-210ENST00000531290 IVNS1ABPQ9Y6Y0 642 aa26.77■■□□□ 1.88
TRAPPC4-210ENST00000531290 ICA1Q05084 483 aa26.76■■□□□ 1.87
TRAPPC4-210ENST00000531290 CHRDL2Q6WN34 429 aa26.76■■□□□ 1.87
TRAPPC4-210ENST00000531290 KBTBD3Q8NAB2 608 aa26.76■■□□□ 1.87
TRAPPC4-210ENST00000531290 LPAR1Q92633 364 aa26.76■■□□□ 1.87
TRAPPC4-210ENST00000531290 SLC15A5A6NIM6 579 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms