RNA–Protein interactions for RNA: ENST00000531196.5

FGFR1-236, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-236ENST00000531196 USP17L22D6RA61 530 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 USP17L17D6RBQ6 530 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 USP17L19D6RCP7 530 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 USP17L20D6RJB6 530 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 PEX10O60683 326 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 TFRCP02786 760 aaKnown RBP13.15□□□□□ -0.3
FGFR1-236ENST00000531196 CYP2D6P10635 497 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 VCAM1P19320 739 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 MAPK4P31152 587 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 ERVK-9P63128 1117 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 ERVK-24P63145 666 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 USP17L24Q0WX57 530 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 SEPT2Q15019 361 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 WDR78Q5VTH9 848 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 ACER1Q8TDN7 264 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 C12orf42Q96LP6 360 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 NUDT12Q9BQG2 462 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 KIAA1683Q9H0B3 1180 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.15□□□□□ -0.3
FGFR1-236ENST00000531196 TXNRD2Q9NNW7 524 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 ECHDC1Q9NTX5 307 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 SWAP70Q9UH65 585 aa13.15□□□□□ -0.3
FGFR1-236ENST00000531196 PRKAB2O43741 272 aa13.14□□□□□ -0.31
FGFR1-236ENST00000531196 SGPL1O95470 568 aa13.14□□□□□ -0.31
FGFR1-236ENST00000531196 CYP2B6P20813 491 aa13.14□□□□□ -0.31
FGFR1-236ENST00000531196 CCNA1P78396 465 aa13.14□□□□□ -0.31
FGFR1-236ENST00000531196 EVX2Q03828 476 aa13.14□□□□□ -0.31
FGFR1-236ENST00000531196 UBE3CQ15386 1083 aa13.14□□□□□ -0.31
FGFR1-236ENST00000531196 SLFNL1Q499Z3 407 aa13.14□□□□□ -0.31
FGFR1-236ENST00000531196 SLC44A5Q8NCS7 719 aa13.14□□□□□ -0.31
FGFR1-236ENST00000531196 ATP8A2Q9NTI2 1148 aa13.14□□□□□ -0.31
FGFR1-236ENST00000531196 RBPJLQ9UBG7 517 aa13.14□□□□□ -0.31
FGFR1-236ENST00000531196 SLC4A4Q9Y6R1 1079 aa13.14□□□□□ -0.31
FGFR1-236ENST00000531196 CENPFP49454 3210 aa13.14□□□□□ -0.31
FGFR1-236ENST00000531196 GLRX3O76003 335 aaKnown RBP13.13□□□□□ -0.31
FGFR1-236ENST00000531196 ZKSCAN1P17029 563 aaPredicted RBP13.13□□□□□ -0.31
FGFR1-236ENST00000531196 GABPAQ06546 454 aa13.13□□□□□ -0.31
FGFR1-236ENST00000531196 TMEM179Q6ZVK1 233 aa13.13□□□□□ -0.31
FGFR1-236ENST00000531196 DYNLL2Q96FJ2 89 aa13.13□□□□□ -0.31
FGFR1-236ENST00000531196 TANGO6Q9C0B7 1094 aa13.13□□□□□ -0.31
FGFR1-236ENST00000531196 RPAP3Q9H6T3 665 aaPredicted RBP13.13□□□□□ -0.31
FGFR1-236ENST00000531196 ARHGEF10LQ9HCE6 1279 aa13.13□□□□□ -0.31
FGFR1-236ENST00000531196 H0YGN5 161 aa13.12□□□□□ -0.31
FGFR1-236ENST00000531196 RGS2P41220 211 aa13.12□□□□□ -0.31
FGFR1-236ENST00000531196 CATSPERGQ6ZRH7 1159 aa13.12□□□□□ -0.31
FGFR1-236ENST00000531196 GPR142Q7Z601 462 aa13.12□□□□□ -0.31
FGFR1-236ENST00000531196 PLEKHH3Q7Z736 793 aa13.12□□□□□ -0.31
FGFR1-236ENST00000531196 TRIB2Q92519 343 aa13.12□□□□□ -0.31
FGFR1-236ENST00000531196 PORCNQ9H237 461 aa13.12□□□□□ -0.31
FGFR1-236ENST00000531196 SH2D4AQ9H788 454 aa13.12□□□□□ -0.31
FGFR1-236ENST00000531196 HMX1Q9NP08 348 aaPredicted RBP13.12□□□□□ -0.31
FGFR1-236ENST00000531196 PAK6Q9NQU5 681 aaPredicted RBP13.12□□□□□ -0.31
FGFR1-236ENST00000531196 GJD2Q9UKL4 321 aa13.12□□□□□ -0.31
FGFR1-236ENST00000531196 RABGAP1Q9Y3P9 1069 aa13.12□□□□□ -0.31
FGFR1-236ENST00000531196 CYP2D7A0A087X1C5 515 aa13.11□□□□□ -0.31
FGFR1-236ENST00000531196 USP17L12C9JPN9 530 aa13.11□□□□□ -0.31
FGFR1-236ENST00000531196 USP17L21D6R901 530 aa13.11□□□□□ -0.31
FGFR1-236ENST00000531196 CHGBP05060 677 aa13.11□□□□□ -0.31
FGFR1-236ENST00000531196 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
FGFR1-236ENST00000531196 AKR1B1P15121 316 aa13.11□□□□□ -0.31
FGFR1-236ENST00000531196 CAPN2P17655 700 aa13.11□□□□□ -0.31
FGFR1-236ENST00000531196 GUCY1A2P33402 732 aa13.11□□□□□ -0.31
FGFR1-236ENST00000531196 ATP2B2Q01814 1243 aa13.11□□□□□ -0.31
FGFR1-236ENST00000531196 ICA1Q05084 483 aa13.11□□□□□ -0.31
FGFR1-236ENST00000531196 HABP4Q5JVS0 413 aaKnown RBP13.11□□□□□ -0.31
FGFR1-236ENST00000531196 TSHZ3Q63HK5 1081 aa13.11□□□□□ -0.31
FGFR1-236ENST00000531196 TRMT44Q8IYL2 757 aaKnown RBP13.11□□□□□ -0.31
FGFR1-236ENST00000531196 APBA2Q99767 749 aa13.11□□□□□ -0.31
FGFR1-236ENST00000531196 DCTPP1Q9H773 170 aa13.11□□□□□ -0.31
FGFR1-236ENST00000531196 ARPP21Q9UBL0 812 aaPredicted RBP13.11□□□□□ -0.31
FGFR1-236ENST00000531196 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
FGFR1-236ENST00000531196 NR2E3Q9Y5X4 410 aa13.11□□□□□ -0.31
FGFR1-236ENST00000531196 IVNS1ABPQ9Y6Y0 642 aa13.11□□□□□ -0.31
FGFR1-236ENST00000531196 TRIOBPQ9H2D6 2365 aa13.11□□□□□ -0.31
FGFR1-236ENST00000531196 RPTORQ8N122 1335 aa13.11□□□□□ -0.31
FGFR1-236ENST00000531196 DOCK3Q8IZD9 2030 aa13.1□□□□□ -0.31
FGFR1-236ENST00000531196 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
FGFR1-236ENST00000531196 TRIM32Q13049 653 aa13.1□□□□□ -0.31
FGFR1-236ENST00000531196 LRRFIP1Q32MZ4 808 aaKnown RBP13.1□□□□□ -0.31
FGFR1-236ENST00000531196 Q3C1V9 767 aa13.1□□□□□ -0.31
FGFR1-236ENST00000531196 C12orf60Q5U649 245 aa13.1□□□□□ -0.31
FGFR1-236ENST00000531196 SAMD1Q6SPF0 538 aaPredicted RBP13.1□□□□□ -0.31
FGFR1-236ENST00000531196 CLEC10AQ8IUN9 316 aa13.1□□□□□ -0.31
FGFR1-236ENST00000531196 KBTBD3Q8NAB2 608 aa13.1□□□□□ -0.31
FGFR1-236ENST00000531196 CCDC17Q96LX7 622 aa13.1□□□□□ -0.31
FGFR1-236ENST00000531196 PUS7LQ9H0K6 701 aaKnown RBP13.1□□□□□ -0.31
FGFR1-236ENST00000531196 BRCA2P51587 3418 aa13.1□□□□□ -0.31
FGFR1-236ENST00000531196 A0A1W2PRG0 241 aa13.09□□□□□ -0.31
FGFR1-236ENST00000531196 SPDYE16A6NNV3 312 aaPredicted RBP13.09□□□□□ -0.31
FGFR1-236ENST00000531196 ERC2O15083 957 aa13.09□□□□□ -0.31
FGFR1-236ENST00000531196 RAD21O60216 631 aa13.09□□□□□ -0.31
FGFR1-236ENST00000531196 EVI5O60447 810 aa13.09□□□□□ -0.31
FGFR1-236ENST00000531196 ZFYP08048 801 aaPredicted RBP13.09□□□□□ -0.31
FGFR1-236ENST00000531196 CDK8P49336 464 aa13.09□□□□□ -0.31
FGFR1-236ENST00000531196 RRP1P56182 461 aaKnown RBP13.09□□□□□ -0.31
FGFR1-236ENST00000531196 MAP2K5Q13163 448 aa13.09□□□□□ -0.31
FGFR1-236ENST00000531196 NECAB2Q7Z6G3 386 aa13.09□□□□□ -0.31
FGFR1-236ENST00000531196 UBE2Q1Q7Z7E8 422 aa13.09□□□□□ -0.31
FGFR1-236ENST00000531196 SPICE1Q8N0Z3 855 aa13.09□□□□□ -0.31
FGFR1-236ENST00000531196 APPBP2Q92624 585 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms