RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 GINM1Q9NU53 330 aa16.25■□□□□ 0.19
HIF3A-214ENST00000531043 CCER2I3L3R5 266 aa16.24■□□□□ 0.19
HIF3A-214ENST00000531043 GUCY1A2P33402 732 aa16.24■□□□□ 0.19
HIF3A-214ENST00000531043 RGS2P41220 211 aa16.24■□□□□ 0.19
HIF3A-214ENST00000531043 TATDN1Q6P1N9 297 aa16.24■□□□□ 0.19
HIF3A-214ENST00000531043 DEFB123Q8N688 67 aa16.24■□□□□ 0.19
HIF3A-214ENST00000531043 C12orf42Q96LP6 360 aa16.24■□□□□ 0.19
HIF3A-214ENST00000531043 FEZ1Q99689 392 aa16.24■□□□□ 0.19
HIF3A-214ENST00000531043 APBA2Q99767 749 aa16.24■□□□□ 0.19
HIF3A-214ENST00000531043 BTBD7Q9P203 1132 aa16.24■□□□□ 0.19
HIF3A-214ENST00000531043 USP5P45974 858 aa16.23■□□□□ 0.19
HIF3A-214ENST00000531043 PLCD1P51178 756 aa16.23■□□□□ 0.19
HIF3A-214ENST00000531043 MAP2K5Q13163 448 aa16.23■□□□□ 0.19
HIF3A-214ENST00000531043 RAB3GAP1Q15042 981 aa16.23■□□□□ 0.19
HIF3A-214ENST00000531043 CATSPERGQ6ZRH7 1159 aa16.23■□□□□ 0.19
HIF3A-214ENST00000531043 CCAR1Q8IX12 1150 aaKnown RBP16.23■□□□□ 0.19
HIF3A-214ENST00000531043 TDHQ8IZJ6 230 aa16.23■□□□□ 0.19
HIF3A-214ENST00000531043 NPLOC4Q8TAT6 608 aa16.23■□□□□ 0.19
HIF3A-214ENST00000531043 UBE2OQ9C0C9 1292 aaKnown RBP16.23■□□□□ 0.19
HIF3A-214ENST00000531043 RLFQ13129 1914 aa16.22■□□□□ 0.19
HIF3A-214ENST00000531043 USP17L15C9J2P7 530 aa16.22■□□□□ 0.19
HIF3A-214ENST00000531043 USP17L13C9JLJ4 530 aa16.22■□□□□ 0.19
HIF3A-214ENST00000531043 USP17L11C9JVI0 530 aa16.22■□□□□ 0.19
HIF3A-214ENST00000531043 USP17L18D6R9N7 530 aa16.22■□□□□ 0.19
HIF3A-214ENST00000531043 USP17L22D6RA61 530 aa16.22■□□□□ 0.19
HIF3A-214ENST00000531043 USP17L17D6RBQ6 530 aa16.22■□□□□ 0.19
HIF3A-214ENST00000531043 USP17L19D6RCP7 530 aa16.22■□□□□ 0.19
HIF3A-214ENST00000531043 USP17L20D6RJB6 530 aa16.22■□□□□ 0.19
HIF3A-214ENST00000531043 VCAM1P19320 739 aa16.22■□□□□ 0.19
HIF3A-214ENST00000531043 SHMT1P34896 483 aa16.22■□□□□ 0.19
HIF3A-214ENST00000531043 MDM2Q00987 491 aaPredicted RBP16.22■□□□□ 0.19
HIF3A-214ENST00000531043 USP17L24Q0WX57 530 aa16.22■□□□□ 0.19
HIF3A-214ENST00000531043 LRIT3Q3SXY7 679 aa16.22■□□□□ 0.19
HIF3A-214ENST00000531043 TRMT44Q8IYL2 757 aaKnown RBP16.22■□□□□ 0.19
HIF3A-214ENST00000531043 GTF3C2Q8WUA4 911 aaPredicted RBP16.22■□□□□ 0.19
HIF3A-214ENST00000531043 SERPINB13Q9UIV8 391 aa16.22■□□□□ 0.19
HIF3A-214ENST00000531043 RABGAP1Q9Y3P9 1069 aa16.22■□□□□ 0.19
HIF3A-214ENST00000531043 ABCB5Q2M3G0 1257 aa16.21■□□□□ 0.19
HIF3A-214ENST00000531043 CERKLQ49MI3 558 aaPredicted RBP16.21■□□□□ 0.19
HIF3A-214ENST00000531043 WDR78Q5VTH9 848 aa16.21■□□□□ 0.19
HIF3A-214ENST00000531043 ITPRIPQ8IWB1 547 aa16.21■□□□□ 0.19
HIF3A-214ENST00000531043 TRPV1Q8NER1 839 aa16.21■□□□□ 0.19
HIF3A-214ENST00000531043 EDC3Q96F86 508 aaKnown RBP16.21■□□□□ 0.19
HIF3A-214ENST00000531043 KIAA1683Q9H0B3 1180 aa16.21■□□□□ 0.19
HIF3A-214ENST00000531043 MTMR10Q9NXD2 777 aa16.21■□□□□ 0.19
HIF3A-214ENST00000531043 NAV1Q8NEY1 1877 aa16.2■□□□□ 0.18
HIF3A-214ENST00000531043 SMCHD1A6NHR9 2005 aa16.2■□□□□ 0.18
HIF3A-214ENST00000531043 SPDYE16A6NNV3 312 aaPredicted RBP16.2■□□□□ 0.18
HIF3A-214ENST00000531043 PTPREP23469 700 aa16.2■□□□□ 0.18
HIF3A-214ENST00000531043 KIAA1755Q5JYT7 1200 aa16.2■□□□□ 0.18
HIF3A-214ENST00000531043 CEP85Q6P2H3 762 aa16.2■□□□□ 0.18
HIF3A-214ENST00000531043 RIOK1Q9BRS2 568 aaKnown RBP16.2■□□□□ 0.18
HIF3A-214ENST00000531043 EHD4Q9H223 541 aa16.2■□□□□ 0.18
HIF3A-214ENST00000531043 RPAP3Q9H6T3 665 aaPredicted RBP16.2■□□□□ 0.18
HIF3A-214ENST00000531043 EXOC6BQ9Y2D4 811 aa16.2■□□□□ 0.18
HIF3A-214ENST00000531043 A0A1W2PRG0 241 aa16.19■□□□□ 0.18
HIF3A-214ENST00000531043 SLC15A5A6NIM6 579 aa16.19■□□□□ 0.18
HIF3A-214ENST00000531043 IGHA2P01877 340 aa16.19■□□□□ 0.18
HIF3A-214ENST00000531043 CYP2C19P33261 490 aa16.19■□□□□ 0.18
HIF3A-214ENST00000531043 GRB14Q14449 540 aa16.19■□□□□ 0.18
HIF3A-214ENST00000531043 SEPT2Q15019 361 aa16.19■□□□□ 0.18
HIF3A-214ENST00000531043 GPR153Q6NV75 609 aa16.19■□□□□ 0.18
HIF3A-214ENST00000531043 AACSQ86V21 672 aa16.19■□□□□ 0.18
HIF3A-214ENST00000531043 CWC22Q9HCG8 908 aaKnown RBP16.19■□□□□ 0.18
HIF3A-214ENST00000531043 ZNFX1Q9P2E3 1918 aaKnown RBP16.18■□□□□ 0.18
HIF3A-214ENST00000531043 CYP2D6P10635 497 aa16.18■□□□□ 0.18
HIF3A-214ENST00000531043 ATN1P54259 1190 aaPredicted RBP16.18■□□□□ 0.18
HIF3A-214ENST00000531043 GABPAQ06546 454 aa16.18■□□□□ 0.18
HIF3A-214ENST00000531043 MFSD14CQ5VZR4 134 aa16.18■□□□□ 0.18
HIF3A-214ENST00000531043 TTC6Q86TZ1 520 aa16.18■□□□□ 0.18
HIF3A-214ENST00000531043 SENP6Q9GZR1 1112 aaPredicted RBP16.18■□□□□ 0.18
HIF3A-214ENST00000531043 IL1RAPL2Q9NP60 686 aa16.18■□□□□ 0.18
HIF3A-214ENST00000531043 DDX20Q9UHI6 824 aaKnown RBP16.18■□□□□ 0.18
HIF3A-214ENST00000531043 UNC80Q8N2C7 3258 aa16.18■□□□□ 0.18
HIF3A-214ENST00000531043 SMIM22K7EJ46 135 aa16.17■□□□□ 0.18
HIF3A-214ENST00000531043 IGSF3O75054 1194 aa16.17■□□□□ 0.18
HIF3A-214ENST00000531043 CNGA1P29973 690 aa16.17■□□□□ 0.18
HIF3A-214ENST00000531043 USP14P54578 494 aa16.17■□□□□ 0.18
HIF3A-214ENST00000531043 CCNA1P78396 465 aa16.17■□□□□ 0.18
HIF3A-214ENST00000531043 ATP2B2Q01814 1243 aa16.17■□□□□ 0.18
HIF3A-214ENST00000531043 MAP3K12Q12852 859 aa16.17■□□□□ 0.18
HIF3A-214ENST00000531043 SLFNL1Q499Z3 407 aa16.17■□□□□ 0.18
HIF3A-214ENST00000531043 ANO1Q5XXA6 986 aa16.17■□□□□ 0.18
HIF3A-214ENST00000531043 LBX2Q6XYB7 198 aa16.17■□□□□ 0.18
HIF3A-214ENST00000531043 FTSJ3Q8IY81 847 aaKnown RBP16.17■□□□□ 0.18
HIF3A-214ENST00000531043 SLC44A5Q8NCS7 719 aa16.17■□□□□ 0.18
HIF3A-214ENST00000531043 STXBP5LQ9Y2K9 1186 aa16.17■□□□□ 0.18
HIF3A-214ENST00000531043 BAZ2AQ9UIF9 1905 aaKnown RBP16.17■□□□□ 0.18
HIF3A-214ENST00000531043 MAGEB6P1A0A0J9YX57 407 aa16.16■□□□□ 0.18
HIF3A-214ENST00000531043 POLR3DP05423 398 aaPredicted RBP16.16■□□□□ 0.18
HIF3A-214ENST00000531043 HOXC6P09630 235 aa16.16■□□□□ 0.18
HIF3A-214ENST00000531043 PDE6AP16499 860 aa16.16■□□□□ 0.18
HIF3A-214ENST00000531043 CLEC10AQ8IUN9 316 aa16.16■□□□□ 0.18
HIF3A-214ENST00000531043 MOV10L1Q9BXT6 1211 aaKnown RBP16.16■□□□□ 0.18
HIF3A-214ENST00000531043 CABP5Q9NP86 173 aa16.16■□□□□ 0.18
HIF3A-214ENST00000531043 LTBP2Q14767 1821 aa16.16■□□□□ 0.18
HIF3A-214ENST00000531043 MYH8P13535 1937 aa16.15■□□□□ 0.18
HIF3A-214ENST00000531043 COBLO75128 1261 aa16.15■□□□□ 0.18
HIF3A-214ENST00000531043 GLRX3O76003 335 aaKnown RBP16.15■□□□□ 0.18
HIF3A-214ENST00000531043 CYBAP13498 195 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms