RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 SPATA20Q8TB22 786 aa19.69■□□□□ 0.74
BRCA2-204ENST00000530893 IRS2Q9Y4H2 1338 aa19.69■□□□□ 0.74
BRCA2-204ENST00000530893 SMIM22K7EJ46 135 aa19.69■□□□□ 0.74
BRCA2-204ENST00000530893 PRDM1O75626 825 aa19.69■□□□□ 0.74
BRCA2-204ENST00000530893 PLEKHA8P1O95397 391 aa19.69■□□□□ 0.74
BRCA2-204ENST00000530893 TM4SF1P30408 202 aa19.69■□□□□ 0.74
BRCA2-204ENST00000530893 GRIN1Q05586 938 aa19.69■□□□□ 0.74
BRCA2-204ENST00000530893 SPECC1Q5M775 1068 aa19.69■□□□□ 0.74
BRCA2-204ENST00000530893 ARMCX5Q6P1M9 558 aa19.69■□□□□ 0.74
BRCA2-204ENST00000530893 ZNF710Q8N1W2 664 aa19.69■□□□□ 0.74
BRCA2-204ENST00000530893 FNBP4Q8N3X1 1017 aaPredicted RBP19.69■□□□□ 0.74
BRCA2-204ENST00000530893 SERTAD1Q9UHV2 236 aa19.69■□□□□ 0.74
BRCA2-204ENST00000530893 MAN1B1Q9UKM7 699 aa19.69■□□□□ 0.74
BRCA2-204ENST00000530893 ACTN4O43707 911 aaKnown RBP19.68■□□□□ 0.74
BRCA2-204ENST00000530893 ATP1A3P13637 1013 aa19.68■□□□□ 0.74
BRCA2-204ENST00000530893 PRDX5P30044 214 aa19.68■□□□□ 0.74
BRCA2-204ENST00000530893 MORC3Q14149 939 aa19.68■□□□□ 0.74
BRCA2-204ENST00000530893 SHISA4Q96DD7 197 aa19.68■□□□□ 0.74
BRCA2-204ENST00000530893 CSRNP2Q9H175 543 aa19.68■□□□□ 0.74
BRCA2-204ENST00000530893 TFCP2L1Q9NZI6 479 aa19.68■□□□□ 0.74
BRCA2-204ENST00000530893 CCNL1Q9UK58 526 aaPredicted RBP19.68■□□□□ 0.74
BRCA2-204ENST00000530893 CNTNAP5Q8WYK1 1306 aa19.68■□□□□ 0.74
BRCA2-204ENST00000530893 CCP110O43303 1012 aa19.68■□□□□ 0.74
BRCA2-204ENST00000530893 BMP6P22004 513 aa19.68■□□□□ 0.74
BRCA2-204ENST00000530893 TRAPPC10P48553 1259 aa19.68■□□□□ 0.74
BRCA2-204ENST00000530893 PIP4K2BP78356 416 aa19.68■□□□□ 0.74
BRCA2-204ENST00000530893 C8orf37Q96NL8 207 aa19.68■□□□□ 0.74
BRCA2-204ENST00000530893 LEMD3Q9Y2U8 911 aa19.68■□□□□ 0.74
BRCA2-204ENST00000530893 THSD7AQ9UPZ6 1657 aa19.67■□□□□ 0.74
BRCA2-204ENST00000530893 TAF1LQ8IZX4 1826 aa19.67■□□□□ 0.74
BRCA2-204ENST00000530893 USP27XA6NNY8 438 aa19.67■□□□□ 0.74
BRCA2-204ENST00000530893 CFAP100Q494V2 611 aa19.67■□□□□ 0.74
BRCA2-204ENST00000530893 DZIP1Q86YF9 867 aaKnown RBP19.67■□□□□ 0.74
BRCA2-204ENST00000530893 WDR66Q8TBY9 1149 aa19.67■□□□□ 0.74
BRCA2-204ENST00000530893 ENOX1Q8TC92 643 aaKnown RBP19.67■□□□□ 0.74
BRCA2-204ENST00000530893 ANKRD7Q92527 254 aa19.67■□□□□ 0.74
BRCA2-204ENST00000530893 TNFRSF25Q93038 417 aa19.67■□□□□ 0.74
BRCA2-204ENST00000530893 LY75O60449 1722 aa19.67■□□□□ 0.74
BRCA2-204ENST00000530893 KIF5BP33176 963 aa19.66■□□□□ 0.74
BRCA2-204ENST00000530893 CCDC178Q5BJE1 867 aa19.66■□□□□ 0.74
BRCA2-204ENST00000530893 VSTM4Q8IW00 320 aa19.66■□□□□ 0.74
BRCA2-204ENST00000530893 ARHGEF1Q92888 912 aaKnown RBP19.66■□□□□ 0.74
BRCA2-204ENST00000530893 FANCLQ9NW38 375 aa19.66■□□□□ 0.74
BRCA2-204ENST00000530893 FOXN1O15353 648 aa19.66■□□□□ 0.74
BRCA2-204ENST00000530893 ERCC5P28715 1186 aaPredicted RBP19.66■□□□□ 0.74
BRCA2-204ENST00000530893 CERKQ8TCT0 537 aa19.66■□□□□ 0.74
BRCA2-204ENST00000530893 TSPY2A6NKD2 308 aa19.65■□□□□ 0.74
BRCA2-204ENST00000530893 SCG2P13521 617 aa19.65■□□□□ 0.74
BRCA2-204ENST00000530893 ATP2B1P20020 1258 aa19.65■□□□□ 0.74
BRCA2-204ENST00000530893 DGKHQ86XP1 1220 aa19.65■□□□□ 0.74
BRCA2-204ENST00000530893 SRBD1Q8N5C6 995 aaKnown RBP19.65■□□□□ 0.74
BRCA2-204ENST00000530893 KIF18AQ8NI77 898 aa19.65■□□□□ 0.74
BRCA2-204ENST00000530893 TSC1Q92574 1164 aa19.65■□□□□ 0.74
BRCA2-204ENST00000530893 PYM1Q9BRP8 204 aaKnown RBP19.65■□□□□ 0.74
BRCA2-204ENST00000530893 SLFN14P0C7P3 912 aa19.64■□□□□ 0.74
BRCA2-204ENST00000530893 GSTO1P78417 241 aa19.64■□□□□ 0.74
BRCA2-204ENST00000530893 NPY5RQ15761 445 aa19.64■□□□□ 0.74
BRCA2-204ENST00000530893 PFKFB3Q16875 520 aaPredicted RBP19.64■□□□□ 0.74
BRCA2-204ENST00000530893 E4F1Q66K89 784 aaPredicted RBP19.64■□□□□ 0.74
BRCA2-204ENST00000530893 PTF1AQ7RTS3 328 aa19.64■□□□□ 0.74
BRCA2-204ENST00000530893 CERS3Q8IU89 383 aa19.64■□□□□ 0.74
BRCA2-204ENST00000530893 UBE2Q2Q8WVN8 375 aa19.64■□□□□ 0.74
BRCA2-204ENST00000530893 ROBO3Q96MS0 1386 aa19.64■□□□□ 0.73
BRCA2-204ENST00000530893 ZNF18P17022 549 aa19.64■□□□□ 0.73
BRCA2-204ENST00000530893 GRAPQ13588 217 aa19.64■□□□□ 0.73
BRCA2-204ENST00000530893 TTC38Q5R3I4 469 aa19.64■□□□□ 0.73
BRCA2-204ENST00000530893 C15orf52Q6ZUT6 534 aaKnown RBP19.64■□□□□ 0.73
BRCA2-204ENST00000530893 GRAPLQ8TC17 118 aaPredicted RBP19.64■□□□□ 0.73
BRCA2-204ENST00000530893 ANKS1AQ92625 1134 aa19.64■□□□□ 0.73
BRCA2-204ENST00000530893 BCL11BQ9C0K0 894 aaPredicted RBP19.64■□□□□ 0.73
BRCA2-204ENST00000530893 MKRN1Q9UHC7 482 aaKnown RBP19.64■□□□□ 0.73
BRCA2-204ENST00000530893 TNRC6CQ9HCJ0 1690 aaKnown RBP19.64■□□□□ 0.73
BRCA2-204ENST00000530893 NPHP1O15259 732 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 LDHBP07195 334 aaKnown RBP19.63■□□□□ 0.73
BRCA2-204ENST00000530893 PRR29P0C7W0 189 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 TOP1P11387 765 aaKnown RBP19.63■□□□□ 0.73
BRCA2-204ENST00000530893 CALML3P27482 149 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 ATP2C1P98194 919 aaPredicted RBP19.63■□□□□ 0.73
BRCA2-204ENST00000530893 EARS2Q5JPH6 523 aaKnown RBP19.63■□□□□ 0.73
BRCA2-204ENST00000530893 C12orf60Q5U649 245 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 SMIM5Q71RC9 77 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 SH3RF1Q7Z6J0 888 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 TXNRD3Q86VQ6 643 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 TMX1Q9H3N1 280 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 SH3GLB2Q9NR46 395 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 TRMT1Q9NXH9 659 aaKnown RBP19.63■□□□□ 0.73
BRCA2-204ENST00000530893 MCM9Q9NXL9 1143 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 BAG3O95817 575 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 RFC4P35249 363 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 PLCD1P51178 756 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 FAM47AQ5JRC9 791 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 FCHSD1Q86WN1 690 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 AMOTL1Q8IY63 956 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 PDILTQ8N807 584 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 DPF2Q92785 391 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 CCDC94Q9BW85 323 aaPredicted RBP19.63■□□□□ 0.73
BRCA2-204ENST00000530893 NFE2L3Q9Y4A8 694 aa19.63■□□□□ 0.73
BRCA2-204ENST00000530893 SBF2Q86WG5 1849 aa19.62■□□□□ 0.73
BRCA2-204ENST00000530893 FAM205CA6NFA0 338 aa19.62■□□□□ 0.73
BRCA2-204ENST00000530893 TRAPPC3LQ5T215 181 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms