RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 MAB21L3Q8N8X9 362 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 CAGE1Q8TC20 777 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 SLC39A2Q9NP94 309 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 HPSEQ9Y251 543 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 IPO7O95373 1038 aaKnown RBP15.89■□□□□ 0.13
PCF11-204ENST00000530660 NBPF14Q5TI25 921 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 CCDC121Q6ZUS5 278 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 DHX32Q7L7V1 743 aaKnown RBP15.89■□□□□ 0.13
PCF11-204ENST00000530660 NLRP14Q86W24 1093 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 STAMBPL1Q96FJ0 436 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 RUFY1Q96T51 708 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 OSBPL7Q9BZF2 842 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 MAN1B1Q9UKM7 699 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 CACNA1FO60840 1977 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 GYPCP04921 128 aa15.88■□□□□ 0.13
PCF11-204ENST00000530660 SLC7A5Q01650 507 aa15.88■□□□□ 0.13
PCF11-204ENST00000530660 NUTM2AQ8IVF1 878 aaPredicted RBP15.88■□□□□ 0.13
PCF11-204ENST00000530660 DMGDHQ9UI17 866 aaKnown RBP15.88■□□□□ 0.13
PCF11-204ENST00000530660 RPS6KL1Q9Y6S9 549 aa15.88■□□□□ 0.13
PCF11-204ENST00000530660 GOLGA6L7A0A1B0GV03 622 aa15.88■□□□□ 0.13
PCF11-204ENST00000530660 PECAM1P16284 738 aaPredicted RBP15.88■□□□□ 0.13
PCF11-204ENST00000530660 PTGISQ16647 500 aa15.88■□□□□ 0.13
PCF11-204ENST00000530660 YIPF3Q9GZM5 350 aa15.88■□□□□ 0.13
PCF11-204ENST00000530660 E7EVH7 732 aa15.88■□□□□ 0.13
PCF11-204ENST00000530660 CWF19L2Q2TBE0 894 aaKnown RBP15.88■□□□□ 0.13
PCF11-204ENST00000530660 CCDC102BQ68D86 513 aa15.88■□□□□ 0.13
PCF11-204ENST00000530660 GRAMD1CQ8IYS0 662 aa15.88■□□□□ 0.13
PCF11-204ENST00000530660 FLT4P35916 1363 aa15.87■□□□□ 0.13
PCF11-204ENST00000530660 USP31Q70CQ4 1352 aa15.87■□□□□ 0.13
PCF11-204ENST00000530660 KCNQ3O43525 872 aa15.87■□□□□ 0.13
PCF11-204ENST00000530660 STX17P56962 302 aa15.87■□□□□ 0.13
PCF11-204ENST00000530660 SLC39A14Q15043 492 aa15.87■□□□□ 0.13
PCF11-204ENST00000530660 CCDC181Q5TID7 509 aa15.87■□□□□ 0.13
PCF11-204ENST00000530660 C6orf89Q6UWU4 347 aa15.87■□□□□ 0.13
PCF11-204ENST00000530660 BZW1Q7L1Q6 419 aaKnown RBP15.87■□□□□ 0.13
PCF11-204ENST00000530660 C3orf20Q8ND61 904 aa15.87■□□□□ 0.13
PCF11-204ENST00000530660 AIDAQ96BJ3 306 aa15.87■□□□□ 0.13
PCF11-204ENST00000530660 LTV1Q96GA3 475 aaPredicted RBP15.87■□□□□ 0.13
PCF11-204ENST00000530660 PAGR1Q9BTK6 254 aa15.87■□□□□ 0.13
PCF11-204ENST00000530660 A2ML1A8K2U0 1454 aa15.87■□□□□ 0.13
PCF11-204ENST00000530660 PPP1R37O75864 691 aa15.87■□□□□ 0.13
PCF11-204ENST00000530660 SLC8A1P32418 973 aa15.87■□□□□ 0.13
PCF11-204ENST00000530660 TRAF1Q13077 416 aa15.87■□□□□ 0.13
PCF11-204ENST00000530660 CAPRIN2Q6IMN6 1127 aaKnown RBP15.87■□□□□ 0.13
PCF11-204ENST00000530660 APTXQ7Z2E3 356 aaKnown RBP15.87■□□□□ 0.13
PCF11-204ENST00000530660 ENOX1Q8TC92 643 aaKnown RBP15.87■□□□□ 0.13
PCF11-204ENST00000530660 PPANQ9NQ55 473 aaKnown RBP15.87■□□□□ 0.13
PCF11-204ENST00000530660 BAIAP2L1Q9UHR4 511 aa15.87■□□□□ 0.13
PCF11-204ENST00000530660 KLHL10Q6JEL2 608 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 CCDC50Q8IVM0 306 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 MAGEC3Q8TD91 643 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 MYO1AQ9UBC5 1043 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 JCADQ9P266 1359 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 UPP2O95045 317 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 RAB27AP51159 221 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 KLHDC4Q8TBB5 520 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 JAKMIP2Q96AA8 810 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 ZIM3Q96PE6 472 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 WWC3Q9ULE0 1092 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 LRRC37A3O60309 1634 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 BACH1O14867 736 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 G3BP1Q13283 466 aaKnown RBP eCLIP15.86■□□□□ 0.13
PCF11-204ENST00000530660 TBC1D25Q3MII6 688 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 STK11IPQ8N1F8 1099 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 ZNF513Q8N8E2 541 aaPredicted RBP15.86■□□□□ 0.13
PCF11-204ENST00000530660 OR8K1Q8NGG5 319 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 CHP1Q99653 195 aa15.86■□□□□ 0.13
PCF11-204ENST00000530660 REXO2Q9Y3B8 237 aaKnown RBP15.86■□□□□ 0.13
PCF11-204ENST00000530660 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.86■□□□□ 0.13
PCF11-204ENST00000530660 SBNO1A3KN83 1393 aa15.85■□□□□ 0.13
PCF11-204ENST00000530660 USP6P35125 1406 aa15.85■□□□□ 0.13
PCF11-204ENST00000530660 BUB1BO60566 1050 aaPredicted RBP15.85■□□□□ 0.13
PCF11-204ENST00000530660 ARID4AP29374 1257 aaPredicted RBP15.85■□□□□ 0.13
PCF11-204ENST00000530660 USHBP1Q8N6Y0 703 aa15.85■□□□□ 0.13
PCF11-204ENST00000530660 KCNH3Q9ULD8 1083 aa15.85■□□□□ 0.13
PCF11-204ENST00000530660 MAP3K2Q9Y2U5 619 aa15.85■□□□□ 0.13
PCF11-204ENST00000530660 MATR3P43243 847 aaKnown RBP eCLIP15.85■□□□□ 0.13
PCF11-204ENST00000530660 PPARAQ07869 468 aa15.85■□□□□ 0.13
PCF11-204ENST00000530660 LRRC1Q9BTT6 524 aa15.85■□□□□ 0.13
PCF11-204ENST00000530660 NUP58Q9BVL2 599 aa15.85■□□□□ 0.13
PCF11-204ENST00000530660 L3MBTL1Q9Y468 752 aa15.85■□□□□ 0.13
PCF11-204ENST00000530660 ANKRD18BA2A2Z9 1011 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 HSF2BPO75031 334 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 COBLO75128 1261 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 MYBL1P10243 752 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 EPB41P11171 864 aaKnown RBP15.84■□□□□ 0.13
PCF11-204ENST00000530660 KIAA1328Q86T90 577 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 U3KPZ7 1027 aaPredicted RBP15.84■□□□□ 0.13
PCF11-204ENST00000530660 EIF4E1BA6NMX2 242 aaKnown RBP15.84■□□□□ 0.13
PCF11-204ENST00000530660 ZMYM6O95789 1325 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 PYGLP06737 847 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 EIF4A1P60842 406 aaKnown RBP15.84■□□□□ 0.13
PCF11-204ENST00000530660 ANKRD20A8PQ5CZ79 823 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 HOOK2Q96ED9 719 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 CYFIP2Q96F07 1278 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 NOD2Q9HC29 1040 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 SEC31BQ9NQW1 1179 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 TRPC6Q9Y210 931 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 TTC36A6NLP5 189 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 FAM107AO95990 144 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms