RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	RAB3GAP1	Q15042	981 aa		18.93	■□□□□ 0.62
TM9SF1-209	ENST00000530468	ABCB5	Q2M3G0	1257 aa		18.93	■□□□□ 0.62
TM9SF1-209	ENST00000530468	MORN1	Q5T089	497 aa		18.93	■□□□□ 0.62
TM9SF1-209	ENST00000530468	APBA2	Q99767	749 aa		18.93	■□□□□ 0.62
TM9SF1-209	ENST00000530468	RIOK1	Q9BRS2	568 aa	Known RBP	18.93	■□□□□ 0.62
TM9SF1-209	ENST00000530468	PORCN	Q9H237	461 aa		18.93	■□□□□ 0.62
TM9SF1-209	ENST00000530468	C11orf49	Q9H6J7	331 aa		18.93	■□□□□ 0.62
TM9SF1-209	ENST00000530468	CWC22	Q9HCG8	908 aa	Known RBP	18.93	■□□□□ 0.62
TM9SF1-209	ENST00000530468	MYH1	P12882	1939 aa		18.92	■□□□□ 0.62
TM9SF1-209	ENST00000530468	MS4A1	P11836	297 aa		18.92	■□□□□ 0.62
TM9SF1-209	ENST00000530468	MNX1	P50219	401 aa	Predicted RBP	18.92	■□□□□ 0.62
TM9SF1-209	ENST00000530468	ZYX	Q15942	572 aa	Known RBP	18.92	■□□□□ 0.62
TM9SF1-209	ENST00000530468	RHPN1	Q8TCX5	695 aa		18.92	■□□□□ 0.62
TM9SF1-209	ENST00000530468	MAGEB6P1	A0A0J9YX57	407 aa		18.91	■□□□□ 0.62
TM9SF1-209	ENST00000530468	GLRX3	O76003	335 aa	Known RBP	18.91	■□□□□ 0.62
TM9SF1-209	ENST00000530468	POLR3D	P05423	398 aa	Predicted RBP	18.91	■□□□□ 0.62
TM9SF1-209	ENST00000530468	POTEE	Q6S8J3	1075 aa		18.91	■□□□□ 0.62
TM9SF1-209	ENST00000530468	CATSPERG	Q6ZRH7	1159 aa		18.91	■□□□□ 0.62
TM9SF1-209	ENST00000530468	C7orf61	Q8IZ16	206 aa		18.91	■□□□□ 0.62
TM9SF1-209	ENST00000530468	PANK1	Q8TE04	598 aa		18.91	■□□□□ 0.62
TM9SF1-209	ENST00000530468	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
TM9SF1-209	ENST00000530468	CRNKL1	Q9BZJ0	848 aa	Known RBP	18.91	■□□□□ 0.62
TM9SF1-209	ENST00000530468	STAP2	Q9UGK3	403 aa		18.91	■□□□□ 0.62
TM9SF1-209	ENST00000530468	ZBED9	Q6R2W3	1325 aa		18.91	■□□□□ 0.62
TM9SF1-209	ENST00000530468	VCAM1	P19320	739 aa		18.9	■□□□□ 0.62
TM9SF1-209	ENST00000530468	SHMT1	P34896	483 aa		18.9	■□□□□ 0.62
TM9SF1-209	ENST00000530468	PLCD1	P51178	756 aa		18.9	■□□□□ 0.62
TM9SF1-209	ENST00000530468	CACNB2	Q08289	660 aa	Predicted RBP	18.9	■□□□□ 0.62
TM9SF1-209	ENST00000530468	SLC9C2	Q5TAH2	1124 aa		18.9	■□□□□ 0.62
TM9SF1-209	ENST00000530468	LBX2	Q6XYB7	198 aa		18.9	■□□□□ 0.62
TM9SF1-209	ENST00000530468	CLASRP	Q8N2M8	674 aa	Known RBP	18.9	■□□□□ 0.62
TM9SF1-209	ENST00000530468	KIF1BP	Q96EK5	621 aa		18.9	■□□□□ 0.62
TM9SF1-209	ENST00000530468	IL1RAPL2	Q9NP60	686 aa		18.9	■□□□□ 0.62
TM9SF1-209	ENST00000530468	CNMD	O75829	334 aa		18.89	■□□□□ 0.61
TM9SF1-209	ENST00000530468	PDE6A	P16499	860 aa		18.89	■□□□□ 0.61
TM9SF1-209	ENST00000530468	BMP8B	P34820	402 aa		18.89	■□□□□ 0.61
TM9SF1-209	ENST00000530468	GABPA	Q06546	454 aa		18.89	■□□□□ 0.61
TM9SF1-209	ENST00000530468	MAP2K5	Q13163	448 aa		18.89	■□□□□ 0.61
TM9SF1-209	ENST00000530468	RPAP2	Q8IXW5	612 aa	Predicted RBP	18.89	■□□□□ 0.61
TM9SF1-209	ENST00000530468	MIER1	Q8N108	512 aa		18.89	■□□□□ 0.61
TM9SF1-209	ENST00000530468	ACER1	Q8TDN7	264 aa		18.89	■□□□□ 0.61
TM9SF1-209	ENST00000530468	GDF15	Q99988	308 aa		18.89	■□□□□ 0.61
TM9SF1-209	ENST00000530468	DDX60L	Q5H9U9	1706 aa	Known RBP	18.88	■□□□□ 0.61
TM9SF1-209	ENST00000530468	ALPK3	Q96L96	1907 aa		18.88	■□□□□ 0.61
TM9SF1-209	ENST00000530468	HMMR	O75330	724 aa		18.88	■□□□□ 0.61
TM9SF1-209	ENST00000530468	CCL14	Q16627	93 aa		18.88	■□□□□ 0.61
TM9SF1-209	ENST00000530468	EDC3	Q96F86	508 aa	Known RBP	18.88	■□□□□ 0.61
TM9SF1-209	ENST00000530468	SLC15A5	A6NIM6	579 aa		18.87	■□□□□ 0.61
TM9SF1-209	ENST00000530468	IFIT2	P09913	472 aa	Known RBP	18.87	■□□□□ 0.61
TM9SF1-209	ENST00000530468	MFSD14C	Q5VZR4	134 aa		18.87	■□□□□ 0.61
TM9SF1-209	ENST00000530468	DNAJC2	Q99543	621 aa	Known RBP	18.87	■□□□□ 0.61
TM9SF1-209	ENST00000530468	RPAP3	Q9H6T3	665 aa	Predicted RBP	18.87	■□□□□ 0.61
TM9SF1-209	ENST00000530468	ZNF532	Q9HCE3	1301 aa		18.87	■□□□□ 0.61
TM9SF1-209	ENST00000530468	MCM9	Q9NXL9	1143 aa		18.87	■□□□□ 0.61
TM9SF1-209	ENST00000530468	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	18.87	■□□□□ 0.61
TM9SF1-209	ENST00000530468	IVNS1ABP	Q9Y6Y0	642 aa		18.87	■□□□□ 0.61
TM9SF1-209	ENST00000530468	PFAS	O15067	1338 aa		18.86	■□□□□ 0.61
TM9SF1-209	ENST00000530468	SPDYE16	A6NNV3	312 aa	Predicted RBP	18.86	■□□□□ 0.61
TM9SF1-209	ENST00000530468	GOLIM4	O00461	696 aa		18.86	■□□□□ 0.61
TM9SF1-209	ENST00000530468	COL6A1	P12109	1028 aa		18.86	■□□□□ 0.61
TM9SF1-209	ENST00000530468	PTPRE	P23469	700 aa		18.86	■□□□□ 0.61
TM9SF1-209	ENST00000530468	CCND3	P30281	292 aa	Predicted RBP	18.86	■□□□□ 0.61
TM9SF1-209	ENST00000530468	GUCY1A2	P33402	732 aa		18.86	■□□□□ 0.61
TM9SF1-209	ENST00000530468	SEPT2	Q15019	361 aa		18.86	■□□□□ 0.61
TM9SF1-209	ENST00000530468	WDR78	Q5VTH9	848 aa		18.86	■□□□□ 0.61
TM9SF1-209	ENST00000530468	LHX8	Q68G74	356 aa		18.86	■□□□□ 0.61
TM9SF1-209	ENST00000530468	DDX19B	Q9UMR2	479 aa		18.86	■□□□□ 0.61
TM9SF1-209	ENST00000530468	RANBP2	P49792	3224 aa	Known RBP	18.85	■□□□□ 0.61
TM9SF1-209	ENST00000530468	TCRBV5S4A2T	A0A5A2	114 aa		18.85	■□□□□ 0.61
TM9SF1-209	ENST00000530468	RAB11FIP3	O75154	756 aa		18.85	■□□□□ 0.61
TM9SF1-209	ENST00000530468	HOXC6	P09630	235 aa		18.85	■□□□□ 0.61
TM9SF1-209	ENST00000530468	GRB14	Q14449	540 aa		18.85	■□□□□ 0.61
TM9SF1-209	ENST00000530468	DCP1A	Q9NPI6	582 aa	Predicted RBP	18.85	■□□□□ 0.61
TM9SF1-209	ENST00000530468	BTBD7	Q9P203	1132 aa		18.85	■□□□□ 0.61
TM9SF1-209	ENST00000530468	SWAP70	Q9UH65	585 aa		18.85	■□□□□ 0.61
TM9SF1-209	ENST00000530468	NAV1	Q8NEY1	1877 aa		18.85	■□□□□ 0.61
TM9SF1-209	ENST00000530468	APBB1	O00213	710 aa		18.84	■□□□□ 0.61
TM9SF1-209	ENST00000530468	MPHOSPH10	O00566	681 aa	Known RBP	18.84	■□□□□ 0.61
TM9SF1-209	ENST00000530468	SOX1	O00570	391 aa	Predicted RBP	18.84	■□□□□ 0.61
TM9SF1-209	ENST00000530468	TMEM179	Q6ZVK1	233 aa		18.84	■□□□□ 0.61
TM9SF1-209	ENST00000530468	SDR42E1	Q8WUS8	393 aa		18.84	■□□□□ 0.61
TM9SF1-209	ENST00000530468	CHMP4B	Q9H444	224 aa	Known RBP	18.84	■□□□□ 0.61
TM9SF1-209	ENST00000530468	HOXC10	Q9NYD6	342 aa		18.84	■□□□□ 0.61
TM9SF1-209	ENST00000530468	MSC	O60682	206 aa		18.83	■□□□□ 0.6
TM9SF1-209	ENST00000530468	ATP2B2	Q01814	1243 aa		18.83	■□□□□ 0.6
TM9SF1-209	ENST00000530468	COG2	Q14746	738 aa		18.83	■□□□□ 0.6
TM9SF1-209	ENST00000530468	DIEXF	Q68CQ4	756 aa	Known RBP	18.83	■□□□□ 0.6
TM9SF1-209	ENST00000530468	LCORL	Q8N3X6	602 aa		18.83	■□□□□ 0.6
TM9SF1-209	ENST00000530468	ZBTB40	Q9NUA8	1239 aa		18.83	■□□□□ 0.6
TM9SF1-209	ENST00000530468		A0A1W2PRG0	241 aa		18.82	■□□□□ 0.6
TM9SF1-209	ENST00000530468	SYN1	P17600	705 aa		18.82	■□□□□ 0.6
TM9SF1-209	ENST00000530468	MAGEA10	P43363	369 aa	Predicted RBP	18.82	■□□□□ 0.6
TM9SF1-209	ENST00000530468	GPR153	Q6NV75	609 aa		18.82	■□□□□ 0.6
TM9SF1-209	ENST00000530468	LPAR1	Q92633	364 aa		18.82	■□□□□ 0.6
TM9SF1-209	ENST00000530468	LRCH3	Q96II8	777 aa		18.82	■□□□□ 0.6
TM9SF1-209	ENST00000530468	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
TM9SF1-209	ENST00000530468	ATP8A2	Q9NTI2	1148 aa		18.82	■□□□□ 0.6
TM9SF1-209	ENST00000530468	PAG1	Q9NWQ8	432 aa		18.82	■□□□□ 0.6
TM9SF1-209	ENST00000530468	FLRT1	Q9NZU1	646 aa		18.82	■□□□□ 0.6
TM9SF1-209	ENST00000530468	STRN	O43815	780 aa		18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms